scholarly journals Pterocarpus marsupium extract extends replicative lifespan in budding yeast

GeroScience ◽  
2021 ◽  
Author(s):  
Mitchell B. Lee ◽  
Michael G. Kiflezghi ◽  
Mitsuhiro Tsuchiya ◽  
Brian Wasko ◽  
Daniel T. Carr ◽  
...  
2017 ◽  
Author(s):  
Cristina Cruz ◽  
Monica Della Rosa ◽  
Christel Krueger ◽  
Qian Gao ◽  
Lucy Field ◽  
...  

AbstractTranscription of protein coding genes is accompanied by recruitment of COMPASS to promoter-proximal chromatin, which deposits di- and tri-methylation on histone H3 lysine 4 (H3K4) to form H3K4me2 and H3K4me3. Here we determine the importance of COMPASS in maintaining gene expression across lifespan in budding yeast. We find that COMPASS mutations dramatically reduce replicative lifespan and cause widespread gene expression defects. Known repressive functions of H3K4me2 are progressively lost with age, while hundreds of genes become dependent on H3K4me3 for full expression. Induction of these H3K4me3 dependent genes is also impacted in young cells lacking COMPASS components including the H3K4me3-specific factor Spp1. Remarkably, the genome-wide occurrence of H3K4me3 is progressively reduced with age despite widespread transcriptional induction, minimising the normal positive correlation between promoter H3K4me3 and gene expression. Our results provide clear evidence that H3K4me3 is required to attain normal expression levels of many genes across organismal lifespan.


2015 ◽  
Vol 463 (3) ◽  
pp. 351-356 ◽  
Author(s):  
Yuka Kamei ◽  
Akiko Tai ◽  
Shota Dakeyama ◽  
Kaori Yamamoto ◽  
Yamato Inoue ◽  
...  

2019 ◽  
Vol 3 ◽  
pp. 104-108 ◽  
Author(s):  
Matthew M. Crane ◽  
Mitsuhiro Tsuchiya ◽  
Ben W. Blue ◽  
Jared D. Almazan ◽  
Kenneth L. Chen ◽  
...  

2021 ◽  
Vol 11 (13) ◽  
pp. 6114
Author(s):  
Emine Güven ◽  
Hong Qin

Replicative lifespan (RLS) of the budding yeast is the number of mother cell divisions until senescence and is instrumental to understanding mechanisms of cellular aging. Recent research has shown that replicative aging is heterogeneous, which argues for mixture modeling. The mixture model is a statistical method to infer subpopulations of the heterogeneous population. Mixture modeling is a relatively underdeveloped area in the study of cellular aging. There is no open access software currently available that assists extensive comparison among mixture modeling methods. To address these needs, we developed an R package called fitmix that facilitates the computation of well-known distributions utilized for RLS data and other lifetime datasets. This package can generate a group of functions for the estimation of probability distributions and simulation of random observations from well-known finite mixture models including Gompertz, Log-logistic, Log-normal, and Weibull models. To estimate and compute the maximum likelihood estimates of the model parameters, the Expectation–Maximization (EM) algorithm is employed.


2021 ◽  
Author(s):  
Pil Jung Kang ◽  
Rachel Mullner ◽  
Haoyu Li ◽  
Derek Hansford ◽  
Han-Wei Shen ◽  
...  

ABSTRACTCell polarity underlies various cellular processes, including cell proliferation and asymmetric cell division. Cdc42, a conserved Rho GTPase, plays a central role in polarity establishment in yeast and animals. While cell polarity is critical for the asymmetric division of budding yeast, whether Cdc42 impacts lifespan is not clear. Here, we show by live-cell imaging that the active Cdc42 level is sporadically elevated in wild-type cells during repeated cell divisions but rarely in the long-lived bud8 deletion mutant. Remarkably, mild overexpression of Cdc42 causes premature aging with frequent symmetric cell divisions despite no harmful effects on young cells. Furthermore, deletion of BUD8 rescues the short lifespan of an rga1 mutant, which lacks a Cdc42 GTPase activating protein, and Bud8 competes with Rga1 for localization to cytokinesis remnants. Collectively, our findings suggest that upregulation of Cdc42 is a proximal cause of cell death in old yeast cells and that Bud8 counteracts Rga1 in modulating the Cdc42 activity to limit replicative lifespan.


10.2741/s379 ◽  
2013 ◽  
Vol S5 (2) ◽  
pp. 396-411 ◽  
Author(s):  
Nicolas Carlos Hoch

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