Retinoid-Related Orphan Receptor β and Transcriptional Control of Neuronal Differentiation

Author(s):  
Hong Liu ◽  
Michihiko Aramaki ◽  
Yulong Fu ◽  
Douglas Forrest
2004 ◽  
Vol 2004 (Fall) ◽  
Author(s):  
Christina Zechel ◽  
Ingrid Koziollek-Drechsler ◽  
Ulrike Sattler ◽  
Marek Samochocki

2017 ◽  
Author(s):  
John D. Blair ◽  
Dirk Hockemeyer ◽  
Jennifer A. Doudna ◽  
Helen S. Bateup ◽  
Stephen N. Floor

AbstractFaithful cellular differentiation requires precise coordination of changes in gene expression. However, the relative contributions of transcriptional and translational regulation during human cellular differentiation are unclear. Here, we induced forebrain neuronal differentiation of human embryonic stem cells (hESCs) and characterized genomewide RNA and translation levels during neurogenesis. We find that thousands of genes change at the translation level across differentiation without a corresponding change in RNA level. Specifically, we identify mTOR complex 1 signaling as a key driver for elevated translation of translation-related genes in hESCs. In contrast, translational repression in active neurons is mediated by transcript 3′ UTRs, through regulatory sequences. Together, our findings identify a functional role for the dramatic 3′ UTR extensions that occur during brain development, and provide insights to interpret genetic variants in post-transcriptional control factors that influence neurodevelopmental disorders and diseases.


1995 ◽  
Vol 41 (1) ◽  
pp. 39-48 ◽  
Author(s):  
K. Neuman ◽  
A. Soosaar ◽  
H. O. Nornes ◽  
Toomas Neuman

2007 ◽  
Vol 21 (12) ◽  
pp. 2877-2889 ◽  
Author(s):  
Wen-xiu Zhao ◽  
Min Tian ◽  
Bi-xing Zhao ◽  
Gui-deng Li ◽  
Bo Liu ◽  
...  

Abstract Acetylation modification regulates the functions of histone and nonhistone proteins, including transcriptional activity, protein interaction, and subcellular localization. Although many nuclear receptors have been shown to be modified by acetylation, whether retinoid X receptors (RXRs) are acetylated and how the acetylation is regulated remains unknown. Here, we provide the first evidence of RXRα acetylation by p300 on lysine 145. Acetylation of RXRα by p300 facilitated its DNA binding and subsequently increased its transcriptional activity. Furthermore, we discovered that TR3, an orphan receptor, exerted a negative regulation on p300-induced RXRα acetylation. TR3 significantly reduced the p300-induced RXRα acetylation and transcriptional activity, and such inhibition required the interaction of TR3 with RXRα. Binding of TR3 to RXRα resulted in the sequestration of RXRα from p300. 9-cis retinoic acid, a ligand for RXRα, enhanced the association of RXRα with TR3, rather than acetylation of RXRα by p300. Biological function analysis revealed that the mitogenic activity of RXRα stimulated by p300 was acetylation dependent and could be repressed by TR3. Upon the treatment of 9-cis retinoic acid, RXRα was translocated with TR3 from the nucleus to the mitochondria, and apoptosis was induced. Taken together, our data demonstrate the distinct regulatory mechanisms of p300 and TR3 on RXRα acetylation and reveal a previously unrecognized role for orphan receptor in the transcriptional control of retinoid receptors.


2006 ◽  
Vol 73 ◽  
pp. 85-96 ◽  
Author(s):  
Richard J. Reece ◽  
Laila Beynon ◽  
Stacey Holden ◽  
Amanda D. Hughes ◽  
Karine Rébora ◽  
...  

The recognition of changes in environmental conditions, and the ability to adapt to these changes, is essential for the viability of cells. There are numerous well characterized systems by which the presence or absence of an individual metabolite may be recognized by a cell. However, the recognition of a metabolite is just one step in a process that often results in changes in the expression of whole sets of genes required to respond to that metabolite. In higher eukaryotes, the signalling pathway between metabolite recognition and transcriptional control can be complex. Recent evidence from the relatively simple eukaryote yeast suggests that complex signalling pathways may be circumvented through the direct interaction between individual metabolites and regulators of RNA polymerase II-mediated transcription. Biochemical and structural analyses are beginning to unravel these elegant genetic control elements.


2013 ◽  
Vol 225 (03) ◽  
Author(s):  
F Sherkheli ◽  
S Ackermann ◽  
F Roels ◽  
H Kocak ◽  
R Volland ◽  
...  

2019 ◽  
Author(s):  
Thi-An Vu ◽  
Ingrid Lema ◽  
Jerome Bouligand ◽  
Laetitia Martinerie ◽  
Marc Lombes ◽  
...  

Author(s):  
Tara A Shrout

Titin is the largest known protein in the human body, and forms the backbone of all striated muscle sarcomeres. The elastic nature of titin is an important component of muscle compliance and functionality. A significant amount of energy is expended to synthesize titin, thus we postulate that titin gene expression is under strict regulatory control in order to conserve cellular resources. In general, gene expression is mediated in part by post-transcriptional control elements located within the 5’ and 3’ untranslated regions (UTRs) of mature mRNA. The 3’UTR in particular contains structural features that affect binding capacity to other RNA components, such as MicroRNA, which control mRNA localization, translation, and degradation. The degree and significance of the regulatory effects mediated by two determined variants of titin’s 3’ UTR were evaluated in Neonatal Rat Ventricular Myocyte and Human Embryonic Kidney cell lines. Recombinant plasmids to transfect these cells lines were engineered by insertion of the variant titin 3’UTR 431- and 1047-base pairs sequences into luciferase reporter vectors. Expression due to an unaltered reporter vector served as the control. Quantitative changes in luciferase activity due to the recombinants proportionally represented the effect titin’s respective 3’UTR conferred on downstream post-transcriptional expression relative to the control. The effect due to titin’s shorter 3’UTR sequence was inconclusive; however, results illustrated that titin’s longer 3’UTR sequence caused a 35 percent decrease in protein expression. Secondary structural analysis of the two sequences revealed differential folding patterns that affect the stability and degree of MicroRNA-binding within titin’s variant 3’UTR sequences.


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