Computational Methods for Prediction of RNA Interactions with Metal Ions and Small Organic Ligands

Author(s):  
Anna Philips ◽  
Grzegorz Łach ◽  
Janusz M. Bujnicki
2019 ◽  
Vol 48 (27) ◽  
pp. 10011-10022 ◽  
Author(s):  
Hui-Sheng Wang ◽  
Cheng-Ling Yin ◽  
Zhao-Bo Hu ◽  
Yong Chen ◽  
Zhi-Quan Pan ◽  
...  

Two [MIII2DyIII2] complexes (M = Fe for 1 and Co for 2) with mixed organic ligands were obtained. Complex 2 exhibits single molecule magnet behavior with Ueff = 64.0(9) K.


2019 ◽  
Vol 970 ◽  
pp. 290-296
Author(s):  
Nadezhda V. Saranchina ◽  
Eldar V. Urazov ◽  
Maria M. Gavrilenko ◽  
Nataliya A. Gavrilenko

A new automated smartphone-based assay for metals ions determination based on the color reaction with organic ligands was developed. Quantification was performed by measuring the color of the polymer optode. This offers a smartphone-based alternative to the colorimeric method for signal treatment usually employed in automatic methods. The technique enabled linear calibration within the range 1–500 ppb of metals ions. The sampling time used for this concentration range was 15 min. The method was also tested for the quantification of metals ions in water samples, followed by digital image treatment of the optode. The automated detection metals ions approach was demonstrated by applying smartphone to the analysis of metals ions. Relative recoveries of the analytes ranged from 87 % to 105 %. The described procedure has the potential to be a fully automated online smartphone platform for the purpose of routine onsite water analysis.


2016 ◽  
Vol 62 ◽  
pp. 541-570 ◽  
Author(s):  
H. A. O. Hill ◽  
A. J. Thomson

Robert J. P. Williams was a pioneer in advancing our understanding of the roles of chemical elements, especially the metals, in biology and in biological evolution. During the first half of his career of more than 60 years at Oxford University he studied the thermodynamic stabilities of transition-metal complexes with organic ligands, their redox properties, magnetism and colour, to understand their biological function. In parallel he collaborated with biologists and biophysicists, for example with Bert Vallee, studying zinc in proteins. Williams was the first to describe how proton gradients could be used to drive the formation of the universal biological fuel, ATP (adenosine triphosphate), a fundamental step in biological energetics. From the late 1960s he studied many proteins that use metal ions for catalysis, for electron transfer and cellular regulation. A leading figure in the establishment of the Oxford Enzyme Group, Williams developed high-field nuclear magnetic resonance (NMR) to study the mobility and dynamics of many protein structures, leading to a deeper understanding of protein function. He held the Royal Society Napier Research Professorship from 1974 until his retirement in 1991. Subsequently he published several books setting out his understanding of the roles of metal ions in biology, and their wider significance in evolution. Bob Williams's deep insights across many disciplines made him a charismatic teacher. His lateral style of thinking never failed to inspire. His legacy lies in the successful careers of his many students and collaborators worldwide and the vigour of the new discipline of bioinorganic chemistry that he helped to establish.


Talanta ◽  
2013 ◽  
Vol 110 ◽  
pp. 202-228 ◽  
Author(s):  
K. Pytlakowska ◽  
V. Kozik ◽  
M. Dabioch

1990 ◽  
Vol 99 (1-2) ◽  
pp. 93-103 ◽  
Author(s):  
Susumu Osaki ◽  
Yasuhiro Kuroki ◽  
Shinji Sugihara ◽  
Yoshimasa Takashima

2021 ◽  
Vol 11 (4) ◽  
pp. 3989-4006

In the present research, a series of Ce+3 metal ions complexation with INZ incorporating Schiff bases have been reported. INZ incorporated Schiff Bases (3a-e) were developed by condensing INZ with substituted aromatic aldehyde and confirmed with various spectral Techniques such as Elemental analysis, UV, IR, 1H-NMR, 13H NMR. All the synthesized organic ligands were evaluated against antibacterial and antifungal stains and found moderate to significant results. The Ce+3 metal ion solution mixed with newly prepared bio-active INZ Schiff bases (3a-e) to afford the [Ce-INZ Schiff Base] complexes (4a-e). The stability constants of prepared complexes were evaluated and found in order as a (3e) > (3d) > (3a) > (3b) > (3c).


Crystals ◽  
2019 ◽  
Vol 9 (7) ◽  
pp. 374 ◽  
Author(s):  
Qian-Jun Deng ◽  
Min Chen ◽  
Dong-Chu Chen ◽  
Zhong-Hong Zhu ◽  
Hua-Hong Zou

The organic ligands (E)-8-hydroxyquinoline-2-carbaldehyde oxime (H2L1) and furan-2-ylmethanamine (H2L2) were used to react with Zn(NO3)2·6H2O at 140 °C solvothermal for two days to obtain the heptanuclear Zn(II) cluster [Zn7(L1)4(HL1)2(H2L2)(µ2-OH)(µ2-O)(NO3)] (1). The X-ray single crystal diffraction reveals that every five-coordinated Zn(II) ions are surrounded by two N atoms and three O atoms with the N2O3 coordination environment and four-coordinated Zn(II) ion surrounded by one N atom and three O atoms in the NO3 coordinated environment. The photoluminescence of cluster 1 is obvious. Moreover, in the presence of Ag(I) ions, cluster 1 exhibits an efficient recognition ability, and it realizes the recognition of toxic metal ions. Here, we have developed cluster-based sensing materials for the efficient detection of heavy metal ions Ag(I) strategies.


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