scholarly journals Integrative Transcriptome Analyses Empower the Anti-COVID-19 Drug Arsenal

iScience ◽  
2020 ◽  
Vol 23 (11) ◽  
pp. 101697
Author(s):  
Nehme El-Hachem ◽  
Edward Eid ◽  
Georges Nemer ◽  
Ghassan Dbaibo ◽  
Ossama Abbas ◽  
...  
2016 ◽  
Vol 24 (4) ◽  
pp. 627-639 ◽  
Author(s):  
Ling Yang ◽  
Ping Li ◽  
Wenjing Yang ◽  
Xiangbo Ruan ◽  
Kurtis Kiesewetter ◽  
...  

2020 ◽  
Author(s):  
Li Wang ◽  
Wei Xia ◽  
Fang Fu ◽  
Xiaolin Luo ◽  
Jiuqiang Guan

Abstract Background The yak (Bos grunniens) is a crucial resource to supply meat and milk to the people localized in Tibetan plateau area. To systemically identify lncRNAs regulating metabolism in yak, we performed transcriptome analyses to simultaneously profile mRNAs and lncRNAs of liver in yak under three representative age (LD: Liver 1 Day, LM: Liver 15 Month, LY: Liver 5 Year) conditions. Result Of 288 differentially regulated lncRNAs, function-oriented filters yield 88 regulated metabolically related lncRNAs that are differentially expressed at least two age conditions. These lncRNAs predicted by lncRNA-mRNA correlation analyses to function in diverse aspects of metabolism. Specific regulations of liver metabolically related lncRNAs were further defined by qRT-PCR. Conclusion Combining genome-wide screens, bioinformatics function predictions, and qRT-PCR analyses, this study supports that a class of lncRNAs function as important metabolic regulators and establishes a framework for systemically investigating the role of lncRNAs in physiological homeostasis of yak.


2018 ◽  
Author(s):  
Omar Nelson ◽  
Ramlogan Sowamber ◽  
Anca Milea ◽  
Michael Considine ◽  
Leah Dodds ◽  
...  

2018 ◽  
Vol 50 (11) ◽  
pp. 1584-1592 ◽  
Author(s):  
Towfique Raj ◽  
Yang I. Li ◽  
Garrett Wong ◽  
Jack Humphrey ◽  
Minghui Wang ◽  
...  

2020 ◽  
Author(s):  
Nehme El Hachem ◽  
Edward Eid ◽  
Georges Nemer ◽  
Ghassan Dbaibo ◽  
Ossama Abbas ◽  
...  

2021 ◽  
Vol 183 ◽  
pp. 104366
Author(s):  
Xuerong Di ◽  
Feng Zheng ◽  
Gareth J. Norton ◽  
Luke Beesley ◽  
Zulin Zhang ◽  
...  

2019 ◽  
Vol 24 (7) ◽  
pp. 1272-1283
Author(s):  
Yongjuan He ◽  
Jiale Lv ◽  
Endong Wang ◽  
Xuenong Xu

As an important pest, Tetranychus urticae fed on thousands of host plants and showed strong capability in host adaptation. However, hardly any success artificial diet has been developed for it. In this study, we compared adult longevity and reproduction of T. urticae that fed on its natural food (bean leaves) and an artificial diet with leaf extracts added, and tried to investigate the reason why the artificial diet was inefficient through transcriptome analyses. Mean adult longevity and cumulative fecundities of T. urticae was reduced by 53.4% and 93.8%, respectively. Transcriptome analyses showed that 1731 genes were differentially expressed comparing individuals fed with the artificial diet and with their natural food, among which most (77.1%) were down regulated. No significant induced expression of xenobiotic transporters and detoxification enzymes were observed when T. urticae were fed with the artificial diet. In contrast, differentially expressed genes were mainly enriched in digestive related terms, especially in lipid metabolism related pathways, with most genes down regulated. Our results indicated the significance in further investigating lipid demand and metabolism of T. urticae to improve its mass rearing techniques.


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