scholarly journals Response of an actin filament network model under cyclic stretching through a coarse grained Monte Carlo approach

2011 ◽  
Vol 274 (1) ◽  
pp. 109-119 ◽  
Author(s):  
John Kang ◽  
Robert L. Steward ◽  
YongTae Kim ◽  
Russell S. Schwartz ◽  
Philip R. LeDuc ◽  
...  
Author(s):  
John Kang ◽  
Robert L. Steward ◽  
YongTae Kim ◽  
Russell Schwartz ◽  
Kathleen M. Puskar ◽  
...  

The cytoskeleton is a dynamic system linked to the cell’s environment through sites of potential mechanical interaction such as focal adhesions, integrins, cellular junctions, and the extracellular matrix. The physiologic mechanical stimulation experienced by cells such as endothelial cells is comprised of multiple mechanical modes (e.g., stretching and shear), thus presenting a challenge to characterize their influence on cell structure.


Materials ◽  
2021 ◽  
Vol 14 (9) ◽  
pp. 2092
Author(s):  
Panagiotis E. Theodorakis ◽  
Yongjie Wang ◽  
Aiqiang Chen ◽  
Bin Liu

Droplet nucleation and evaporation are ubiquitous in nature and many technological applications, such as phase-change cooling and boiling heat transfer. So far, the description of these phenomena at the molecular scale has posed challenges for modelling with most of the models being implemented on a lattice. Here, we propose an off-lattice Monte-Carlo approach combined with a grid that can be used for the investigation of droplet formation and evaporation. We provide the details of the model, its implementation as Python code, and results illustrating its dependence on various parameters. The method can be easily extended for any force-field (e.g., coarse-grained, all-atom models, and external fields, such as gravity and electric field). Thus, we anticipate that the proposed model will offer opportunities for a wide range of studies in various research areas involving droplet formation and evaporation and will also form the basis for further method developments for the molecular modelling of such phenomena.


2011 ◽  
Vol 100 (3) ◽  
pp. 34a
Author(s):  
John Kang ◽  
Robert L. Steward ◽  
YongTae Kim ◽  
Russell S. Schwartz ◽  
Philip R. LeDuc ◽  
...  

Langmuir ◽  
2010 ◽  
Vol 26 (20) ◽  
pp. 15814-15823 ◽  
Author(s):  
Stefano Elli ◽  
Lidia Eusebio ◽  
Paolo Gronchi ◽  
Fabio Ganazzoli ◽  
Marco Goisis

RSC Advances ◽  
2014 ◽  
Vol 4 (100) ◽  
pp. 56625-56636 ◽  
Author(s):  
Zidan Zhang ◽  
Long Wang ◽  
Zilu Wang ◽  
Xuehao He ◽  
Yu Chen ◽  
...  

2009 ◽  
Vol 8 (3-4) ◽  
pp. 324-335 ◽  
Author(s):  
Damien Querlioz ◽  
Huu-Nha Nguyen ◽  
Jérôme Saint-Martin ◽  
Arnaud Bournel ◽  
Sylvie Galdin-Retailleau ◽  
...  

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