scholarly journals Genome sequencing and functional characterization of the non-pathogenic Klebsiella pneumoniae KpGe bacteria

2018 ◽  
Vol 20 (5) ◽  
pp. 293-301 ◽  
Author(s):  
Wanessa C. Lima ◽  
Trestan Pillonel ◽  
Claire Bertelli ◽  
Estelle Ifrid ◽  
Gilbert Greub ◽  
...  
2015 ◽  
Vol 6 ◽  
Author(s):  
Ella Kaplan ◽  
Noa Sela ◽  
Adi Doron-Faigenboim ◽  
Shiri Navon-Venezia ◽  
Edouard Jurkevitch ◽  
...  

2021 ◽  
Vol 1869 (1) ◽  
pp. 140554
Author(s):  
Surbhi Mundra ◽  
Ravi Kant Pal ◽  
Sarita Tripathi ◽  
Anupam Jain ◽  
Ashish Arora

Plant Science ◽  
2018 ◽  
Vol 267 ◽  
pp. 148-156 ◽  
Author(s):  
Hafiz Mamoon Rehman ◽  
Muhammad Amjad Nawaz ◽  
Zahid Hussain Shah ◽  
Seung Hwan Yang ◽  
Gyuhwa Chung

2018 ◽  
Vol 5 (5) ◽  
Author(s):  
Fiorella Krapp ◽  
Egon A Ozer ◽  
Chao Qi ◽  
Alan R Hauser

Abstract Reports of extensively drug-resistant and pan-drug-resistant Klebsiella pneumoniae (XDR-KP and PDR-KP) cases are increasing worldwide. Here, we report a case of XDR-KP with an in-depth molecular characterization of resistance genes using whole-genome sequencing, and we review all cases of XDR-KP and PDR-KP reported in the United States to date.


Structure ◽  
1999 ◽  
Vol 7 (4) ◽  
pp. 425-434 ◽  
Author(s):  
R Dutzler ◽  
G Rummel ◽  
S Albertí ◽  
S Hernández-Allés ◽  
PS Phale ◽  
...  

PLoS ONE ◽  
2020 ◽  
Vol 15 (7) ◽  
pp. e0227529
Author(s):  
Andrés M. Rueda ◽  
Yossef López de los Santos ◽  
Antony T. Vincent ◽  
Myriam Létourneau ◽  
Inés Hernández ◽  
...  

Author(s):  
Jane Chepsergon ◽  
Thabiso Motaung ◽  
Lucy Moleleki

Phytopathogenic oomycetes are known to infect a host plant successfully due to their ability to secrete a set of protein effectors. Of interest to many researchers are effectors with the N-terminal RxLR motif (Arginine-any amino acid-Leucine-Arginine). Owing to the genome sequencing, we can now comprehend the high level of diversity among oomycete effectors, and similarly, their conservation within and among species core RxLR effectors (CREs). Currently, there are a couple of putative CREs that have been identified in oomycetes. The functional characterization of these CREs proposes their virulence role with the potential of targeting central cellular processes that are conserved across diverse plant species. This could be harnessed in engineering plants for broad-spectrum and durable resistance.


2019 ◽  
Author(s):  
Andrés M. Rueda ◽  
Yossef López de los Santos ◽  
Antony T. Vincent ◽  
Myriam Létourneau ◽  
Inés Hernández ◽  
...  

AbstractThe pretreatment of biomass is a critical requirement of bio-renewable fuel production from lignocellulose. Although current processes primarily involve chemical and physical approaches, the biological breakdown of lignin using enzymes and microorganisms is quickly becoming an interesting eco-friendly alternative to classical processes. As a result, bioprospection of wild fungi from naturally occurring lignin-rich sources remains a suitable method to uncover and isolate new species exhibiting ligninolytic activity. In this study, wild species of white rot fungi were collected from Colombian forests based on their natural wood decay ability and high capacity to secrete oxidoreductases with high affinity for phenolic polymers such as lignin. Based on high activity obtained from solid-state fermentation using a lignocellulose source from oil palm as matrix, we describe the isolation and whole-genome sequencing of Dictyopanus pusillus, a wild basidiomycete fungus exhibiting ABTS oxidation as an indication of laccase activity. Functional characterization of a crude enzymatic extract identified laccase activity as the main enzymatic contributor to fungal extracts, an observation supported by the identification of 13 putative genes encoding for homologous laccases in the genome. To the best of our knowledge, this represents the first report of an enzymatic extract exhibiting laccase activity in the Dictyopanus genera, offering means to exploit this species and its enzymes for the delignification process of lignocellulosic by-products from oil palm.


PLoS ONE ◽  
2020 ◽  
Vol 15 (4) ◽  
pp. e0231503
Author(s):  
Katarina Benulič ◽  
Mateja Pirš ◽  
Natacha Couto ◽  
Monika Chlebowicz ◽  
John W. A. Rossen ◽  
...  

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