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2022 ◽  
Vol 82 ◽  
Author(s):  
L. A. Oliveira ◽  
M. M. Macedo ◽  
J. L. S. Rodrigues ◽  
E. S. Lima ◽  
P. G. Hamill ◽  
...  

Abstract Since the classic studies of Alexander Flemming, Penicillium strains have been known as a rich source of antimicrobial substances. Recent studies have identified novel metabolites produced by Penicillium sclerotiorum that have antibacterial, antifouling and pharmaceutical activities. Here, we report the isolation of a P. sclerotiorum (LM 5679) from Amazonian soil and carry out a culture-based study to determine whether it can produce any novel secondary metabolite(s) that are not thus-far reported for this genus. Using a submerged culture system, secondary metabolites were recovered by solvent extract followed by thin-layer chromatography, nuclear magnetic resonance, and mass spectroscopy. One novel secondary metabolite was isolated from P. sclerotiorum (LM 5679); the phenolic compound 5-pentadecyl resorcinol widely known as an antifungal, that is produced by diverse plant species. This metabolite was not reported previously in any Penicillium species and was only found once before in fungi (that time, in a Fusarium). Here, we discuss the known activities of 5-pentadecyl resorcinol in the context of its mode-of-action as a hydrophobic (chaotropicity-mediated) stressor.


2021 ◽  
Vol 37 ◽  
pp. e37090
Author(s):  
Panyapon Pumkaeo ◽  
Wenhao Lu ◽  
Youki Endou ◽  
Tomofumi Mizuno ◽  
Junko Takahashi ◽  
...  

Bioaerosols are atmospheric particles with a biological trace, such as viruses, bacteria, fungi, and plant material such as pollen and plant debris. In this study, we analyzed the biological information in bioaerosols using next generation sequencing of the trace DNA. The samples were collected using an Andersen air sampler and separated into two groups according to particulate matter (PM) size: small (PM2.5) and large (PM10). Amplification and sequencing of the bacterial 16S rDNA gene, prokaryotic internal transcribed spacer 1 (ITS1) region and DNA sequence of a plant chloroplast gene (rbcL) were carried out using several sets of specific primers targeting animal and plant sequences. Lots of bacterial information was detected from the bioaerosols. The most abundant bacteria in several samples were of the Actinobacteria (class), Alphaproteobacteria, Bacilli, and Clostridia. For the animal detection using internal transcribed spacer 1, only uncultured fungi were detected in more than half of the hits, with a high number of Cladosporium sp. in the samples. For the plant identification, the ITS1 information only matched fungal species. However, targeting of the rbcL region revealed diverse plant information, such as Medicago papillosa. In conclusion, traces of bacteria, fungi, and plants could be detected in the bioaerosols, but not of animals using our primers.


2021 ◽  
Author(s):  
Cisse El Hadji Malick ◽  
Miao Ling-Feng ◽  
Li Da-Dong ◽  
Yang Fan

Metabolic engineering in plant can be describe as a tool using molecular biological technologies which promotes enzymatic reactions that can enhance the biosynthesis of existing compounds such as glycine betaine (GB) in plant species that are able to accumulate GB, or produce news compounds like GB in non-accumulators plants. Moreover we can include to these definition, the mediation in the degradation of diverse compounds in plant organism. For decades, one of the most popular ideas in metabolic engineering literature is the idea that the improvement of gly betaine or melatonin accumulation in plant under environmental stress can be the main window to ameliorate stress tolerance in diverse plant species. A challenging problem in this domain is the integration of different molecular technologies like transgenesis, enzyme kinetics, promoter analysis, biochemistry and genetics, protein sorting, cloning or comparative physiology to reach that objective. A large number of approaches have been developed over the last few decades in metabolic engineering to overcome this problem. Therefore, we examine some previous work and propose some understanding about the use of metabolic engineering in plant stress tolerance. Moreover, this chapter will focus on melatonin (Hormone) and gly betaine (Osmolyte) biosynthesis pathways in engineering stress resistance.


Author(s):  
Fernando Teruhiko Hata ◽  
Pedro Henrique Togni ◽  
Maurício Ursi Ventura ◽  
José Eduardo Poloni da Silva ◽  
Nilson Zacarias Ferreira ◽  
...  

Abstract Non-crop plant diversity plays a fundamental role in the conservation of predatory mite (PM) and can be proposed as a banker plant system (BPS). BPSs provide plants that host natural enemies in greenhouses or field crops and may improve the efficiency of biological control. The aim of this study was to investigate if a diverse plant composition could be a suitable BPS for PMs in strawberry crops. A plant inventory characterized 22 species of non-crop plants harboring PMs. The most abundant PMs, in decreasing order, were Neoseiulus californicus, Neoseiulus anonymus, Euseius citrifolius, and Euseius concordis. PMs were randomly distributed among plants. We also found specific associations of Phytoseiidae species and phytophagous or generalist mites on plants. Due to this, four species were deemed suitable as banker plants: Capsicum sp., Leonurus sibiricus, Solanum americanum, and Urochloa mutica. Moreover, these plants combined a high PMs density and a low occurrence or absence of pest-mites. This study suggests shifting the traditional view that BPSs are composed of a limited number of species to use plant assemblages. This contributes to both conservation and augmentative biological control.


2021 ◽  
Author(s):  
Agnieszka Zienkiewicz ◽  
Marta Saldat ◽  
Krzysztof Zienkiewicz

In plants, lipids serve as one of the major and vital cellular constituents. Neutral lipids reserves play an essential role in the plant life cycle by providing carbon and energy equivalents for periods of active metabolism. The most common form of lipid storage are triacylglycerols (TAGs) packed into specialized organelles called lipid droplets (LDs). They have been observed in diverse plant organs and tissues, like oil seeds or pollen grains. LDs consist of a core, composed mostly of TAGs, enclosed by a single layer of phospholipids that is decorated by a unique set of structural proteins. Moreover, the recent advances in exploration of LDs proteome revealed a plethora of diverse proteins interacting with LDs. This is likely the result of a highly dynamic nature of these organelles and their involvement in many diverse aspect of cellular metabolism, tightly synchronized with plant developmental programs and directly related to plant-environment interactions. In this review we summarize and discuss the current progress in understanding the role of LDs and their cargo during plants life cycle, with a special emphasis on developmental aspects.


Agronomy ◽  
2021 ◽  
Vol 11 (11) ◽  
pp. 2159
Author(s):  
Fulya Batur ◽  
Riccardo Bocci ◽  
Béla Bartha

Farmer seed systems come in many shades: Conserving, producing, and using diverse plant material for different motives and purposes, whether the conservation or selection of locally adapted plant varieties and populations, or the safeguard of social bonds to secure economic stability and integration into rural communities. In Europe, strict seed marketing rules, by viewing any exchange of seeds as commercial exploitation, have first outlawed these farmer seed systems and the varieties conserved and developed in these systems, before carving out limited space for them as derogations to the main regime that remains based on mandatory variety registration and certified seed production. Examining these spaces in the legislation of the European Union (‘EU’) and Switzerland, along with their practical implications on the ground, the article shows the conceptual shortcomings of the EU legislation to fully address all the characteristics of farmer seed systems, especially to recognize farmers’ innovation. It exposes the need to carefully define, assess and adjust the underlying objectives of the future EU legislative effort to register farmers’ varieties or allow for their exchange, to fully represent and address the complex socio-economic values and diversity of farmer seed systems. The success of these endeavors will lie in the truthful representation, but also the engagement of farmers and social actors that not only conserve, but also dynamically manage agrobiodiversity.


2021 ◽  
Vol 2021 ◽  
pp. 1-12
Author(s):  
Yuqiang Wu ◽  
Weiwei Guo ◽  
Dinghai Yang

In order to explore the feasibility of applying neural network model to landscape planning, based on the multispecies evolutionary genetic algorithm, a neural network model is proposed in this paper for the system design of diverse plant landscape planning. From the perspective of plant species diversity, this paper discusses landscape planning based on a neural network model. This landscape plan involves more than 180 plant species, mainly shrubs, fungi, and so on. The application of multispecies evolutionary genetic algorithm to landscape planning and design and the application of gene level coding and multispecies parallel evolution strategy to the evolutionary design of neural network have guiding significance for plant landscape planning and design. Compared with the traditional neural network modeling method and genetic algorithm, the proposed method has the advantages of wide network structure search space and simple algorithm calculation and design, independent of specific application background, and has strong application and promotion value. This method makes the model performance evaluation index more comprehensive and accurate and the model solution more reasonable. At the same time, combined with the specific status and corresponding changes of various plants in each season, this paper designs a targeted plan to rationally plan the specific spatial layout of the plant landscape and the combination of different types of plant landscapes, so as to effectively improve the quality of the landscape.


2021 ◽  
Author(s):  
Collin B. Edwards ◽  
Stephen B. Ellner ◽  
Anurag Agrawal

As a general rule, plants defend against herbivores with multiple traits. The defense synergy hypothesis posits that some traits are more potent when co-expressed with others, compared to their independent potency. However, this hypothesis has rarely been tested outside of synergies within a class of particular phytochemicals, and seldom under field conditions. We tested for synergies between multiple defense traits of common milkweed (Asclepias syriaca) by assaying the performance of two specialist herbivores on plants in natural populations. We employed both standard regression and exploratory analysis using a novel application of Random Forests that allowed us to detect synergies between defense traits. In hypothesis testing, we found the first empirical evidence for a previously hypothesized synergy between one pair of co-expressed defense traits (latex and cardenolides), but not another (latex and trichomes). When exploring all potential interactions between pairs of traits we found eight synergies and five antagonisms in predicting herbivore performance. Half of the identified synergies involved carbon, which is the basis of several defenses including chemical and physical barriers to feeding, and also essential nutrients. Our findings suggest that defense synergies could explain co-expression of latex and cardenolides in milkweeds. This synergy may be common among the diverse plant species that employ latex as a defense. Future studies should test carbon-based synergies, which our work suggests are prevalent, as well as the other synergies identified in our exploratory analysis. Our analytic approach provides a general, flexible framework for more broadly discovering and predicting the coexpression of traits through their synergistic function.


Author(s):  
Phillip L. Martin ◽  
William King ◽  
Terrence H Bell ◽  
Kari Peter

Bitter rot is a disease of apple caused by fungi in the genus Colletotrichum. Management begins with removal of infected twigs and fruits from tree canopies to reduce overwintering inoculum. Infected apples are usually tossed to the orchard floor, which is generally managed as herbicide-treated weed-free tree rows, separated by grass drive rows. We monitored decay rates and succession of fungi of apples with bitter rot in tree canopies, and on the soil surface in tree rows, grass drive rows, and nearby diverse plant communities. We hypothesized that decay would occur most rapidly within diverse plant communities, which would provide a more diverse array of potential fungal decomposers. Apples in tree canopies became dry and mummified and had more Colletotrichum gene marker copies the following growing season than did apples on the soil surface. Of the soil surface samples, those in grass drive rows and diverse plant communities had higher moisture, faster decay rates, and sharper decreases in Colletotrichum gene marker copies than apples in tree rows. Fungal composition across all decaying apples was dominated by yeasts, with higher genus-level richness, diversity, and evenness in apples from tree canopies than those on the soil surface. In soil surface apples, we observed clear successional waves of Pichia, Kregervanrija, and [Candida] yeasts, with similar but distinctly diverging fungal composition. Our results show that orchard floor management can influence fungal succession in apples with bitter rot, but suggests that bitter rot management should primarily focus on removing infected apples from tree canopies.


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