Genomics, microbiomes, single cell analysis and next-generation sequencing

2013 ◽  
Vol 95 (3) ◽  
pp. 400 ◽  
Author(s):  
Gerwald A. Köhler ◽  
Peter C.K. Lau
2015 ◽  
Vol 7 (12) ◽  
pp. 1587-1597 ◽  
Author(s):  
Konstantinos Tsioris ◽  
Namita T. Gupta ◽  
Adebola O. Ogunniyi ◽  
Ross M. Zimnisky ◽  
Feng Qian ◽  
...  

Analysis of the B cell response to West Nile virus by integrated single-cell analysis and next generation sequencing reveals novel neutralizing antibodies.


Lab on a Chip ◽  
2015 ◽  
Vol 15 (14) ◽  
pp. 3013-3020 ◽  
Author(s):  
Sara Mahshid ◽  
Mohammed Jalal Ahamed ◽  
Daniel Berard ◽  
Susan Amin ◽  
Robert Sladek ◽  
...  

We present a lab-on-a-chip for the next generation of single-cell genomics, performing full-cycle single-cell analysis by demonstrating mega-base pair genomic DNAs in nanochannels extracted in situ.


2016 ◽  
Vol 21 (4) ◽  
pp. 557-567 ◽  
Author(s):  
Sergio Mora-Castilla ◽  
Cuong To ◽  
Soheila Vaezeslami ◽  
Robert Morey ◽  
Srimeenakshi Srinivasan ◽  
...  

Author(s):  
Renumathy Dhanasekaran

AbstractTumor heterogeneity, a key hallmark of hepatocellular carcinomas (HCCs), poses a significant challenge to developing effective therapies or predicting clinical outcomes in HCC. Recent advances in next-generation sequencing-based multi-omic and single cell analysis technologies have enabled us to develop high-resolution atlases of tumors and pull back the curtain on tumor heterogeneity. By combining multiregion targeting sampling strategies with deep sequencing of the genome, transcriptome, epigenome, and proteome, several studies have revealed novel mechanistic insights into tumor initiation and progression in HCC. Advances in multiparametric immune cell profiling have facilitated a deeper dive into the biological complexity of HCC, which is crucial in this era of immunotherapy. Moreover, studies using liquid biopsy have demonstrated their potential to circumvent the need for tissue sampling to investigate heterogeneity. In this review, we discuss how multi-omic and single-cell sequencing technologies have advanced our understanding of tumor heterogeneity in HCC.


2020 ◽  
Vol 493 ◽  
pp. 245-253
Author(s):  
Jun Yu ◽  
Georgios Gemenetzis ◽  
Benedict Kinny-Köster ◽  
Joseph R. Habib ◽  
Vincent P. Groot ◽  
...  

Sign in / Sign up

Export Citation Format

Share Document