Hydrogen bonded network of 1,1-cyclobutanedicarboxylic acid (CBD) salts: Effect of amine backbone on supramolecular assembly

2021 ◽  
Vol 1232 ◽  
pp. 130025
Author(s):  
Mayuri Shaiwale ◽  
Amar Ballabh
2019 ◽  
Vol 10 (1) ◽  
Author(s):  
Julia Y. Rho ◽  
Henry Cox ◽  
Edward D. H. Mansfield ◽  
Sean H. Ellacott ◽  
Raoul Peltier ◽  
...  

Abstract Self-assembling peptides have the ability to spontaneously aggregate into large ordered structures. The reversibility of the peptide hydrogen bonded supramolecular assembly make them tunable to a host of different applications, although it leaves them highly dynamic and prone to disassembly at the low concentration needed for biological applications. Here we demonstrate that a secondary hydrophobic interaction, near the peptide core, can stabilise the highly dynamic peptide bonds, without losing the vital solubility of the systems in aqueous conditions. This hierarchical self-assembly process can be used to stabilise a range of different β-sheet hydrogen bonded architectures.


2006 ◽  
Vol 71 (5) ◽  
pp. 2143-2146 ◽  
Author(s):  
Yao-Peng Zhao ◽  
Chun-Chang Zhao ◽  
Li-Zhu Wu ◽  
Li-Ping Zhang ◽  
Chen-Ho Tung ◽  
...  

2011 ◽  
Vol 29 (12) ◽  
pp. 2684-2688 ◽  
Author(s):  
Maolin Yu ◽  
Chunchang Zhao ◽  
Ke Feng ◽  
Bin Chen ◽  
Chenho Tung ◽  
...  

2008 ◽  
Vol 64 (5) ◽  
pp. m603-m604 ◽  
Author(s):  
Alexander M. Kirillov ◽  
Piotr Smoleński ◽  
M. Fátima C. Guedes da Silva ◽  
Maximilian N. Kopylovich ◽  
Armando J. L. Pombeiro

2012 ◽  
Vol 68 (5) ◽  
pp. o199-o203 ◽  
Author(s):  
Andrés F. Yépes ◽  
Alirio Palma ◽  
Antonio Marchal ◽  
Justo Cobo ◽  
Christopher Glidewell

In both 2-amino-6-methoxy-4-(4-methylanilino)-5-nitrosopyrimidine, C12H13N5O2, (I), and ethylN-[4-(1-adamantylamino)-2-amino-5-nitrosopyrimidin-6-yl]-3-aminopropionate, C19H28N6O3, (II), the nitrosopyrimidine unit is planar and the bond distances provide evidence for significant polarization of the electronic structures. In (II), the ethoxycarbonyl fragment of the molecule is disordered over two sets of sites with occupancies of 0.910 (4) and 0.090 (4). In the molecules of both compounds, there is an intramolecular N—H...O hydrogen bond. The molecules of (I) are linked into a chain of rings by a combination of N—H...O and C—H...O hydrogen bonds, while the molecules of (II) are linked by a two-centre N—H...N hydrogen bond and a three-centre N—H...(N,O) hydrogen bond to form sheets containing four distinct types of ring.


2011 ◽  
Vol 41 (6) ◽  
pp. 864-867 ◽  
Author(s):  
Jeyaraman Selvaraj Nirmalram ◽  
Duraisamy Tamilselvi ◽  
Packianathan Thomas Muthiah

1997 ◽  
pp. 2181-2182 ◽  
Author(s):  
Nicola Armaroli ◽  
Francesco Barigelletti ◽  
Giuseppe Calogero ◽  
Lucia Flamigni ◽  
Nicola Armaroli ◽  
...  

2004 ◽  
Vol 82 (10) ◽  
pp. 1481-1494 ◽  
Author(s):  
B Han ◽  
Z Li ◽  
S Pronkin ◽  
Th. Wandlowski

The adsorption and phase formation of 3 mmol L–1 trimesic acid (TMA) on Au(111-25 nm) film electrodes in contact with aq. 0.1 mol L–1 HClO4 electrolyte have been investigated by in situ ATR-SEIRAS, cyclic voltammetry, chronoamperometry, and STM measurements. Depending on the applied electrode potential, TMA molecules assemble in three distinctly different 2D ordered adlayers. In the range 0.10 < E < 0.50 V, planar-oriented molecules form an open ring honeycomb pattern (phase I) stabilized by directional hydrogen bonds. Interfacial water molecules are being replaced. A close-packed, physisorbed adlayer II forms at higher potentials in the range 0.58 < E < 0.75 V. Further increase of the electrode potential causes an orientation change. An initially disordered phase transforms into an ordered, stripe-like chemisorbed adlayer III of perpendicularly oriented TMA molecules (0.90 < E < 1.20 V). One carboxylate group per molecule is bound to the electrode surface, while the two other protonated carboxyl groups are directed toward the electrolyte, and act as structure-determining components of a hydrogen-bonded molecular ladder network. Strongly hydrogen-bonded and isolated water species are co-adsorbed. The potential-induced formation of chemisorbed TMA proceeds in two steps: (i) orientation change from planar to a disordered tilted and (or) perpendicular phase IIIa (τ < 5 ms) according to a Langmuir-type kinetics; (ii) subsequently, the chemisorbed TMA molecules align into a highly ordered, stripe-like phase IIIb with co-adsorbed water species. Key words: ATR-SEIRAS, trimesic acid, Au(111), supramolecular assembly.


CrystEngComm ◽  
2021 ◽  
Author(s):  
Sourav Roy ◽  
Dipankar Sutradhar ◽  
Michael G B Drew ◽  
Shouvik Chattopadhyay

To understand the packing in a particular crystal we need to investigate the supramolecular interactions. Here we report a hydronium ion encapsulated within a dimeric assembly of two different nickel(II)...


2020 ◽  
Vol 22 (11) ◽  
pp. 6167-6175 ◽  
Author(s):  
Ankita Katiyar ◽  
Julia C. Freire Sovierzoski ◽  
Paul B. Calio ◽  
Anthony A. Vartia ◽  
Ward H. Thompson

Water molecules associated with a hexameric resorcin[4]arene supramolecular assembly exchange on timescales from picoseconds to nanoseconds.


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