Species pool and local ecological assembly processes shape the β-diversity of diazotrophs in grassland soils

2021 ◽  
pp. 108338
Author(s):  
Yansu Wang ◽  
Chaonan Li ◽  
Bo Tu ◽  
Yongping Kou ◽  
Xiangzhen Li
Keyword(s):  
Species Pool ◽  
Grassland Soils ◽  
Β Diversity

Species Pool Functional Diversity Plays a Hidden Role in Generating β-Diversity

2018 ◽  
Vol 191 (5) ◽  
pp. E159-E170 ◽  
Author(s):  
Christopher J. Patrick ◽  
Bryan L. Brown
Keyword(s):  
Functional Diversity ◽  
Species Pool ◽  
Β Diversity

scholarly journals Diversity Patterns of Different Life Forms of Plants along an Elevational Gradient in Crete, Greece

Diversity ◽  
2019 ◽  
Vol 11 (10) ◽  
pp. 200 ◽  
Author(s):  
Maria Lazarina ◽  
Athanasios Charalampopoulos ◽  
Maria Psaralexi ◽  
Nikos Krigas ◽  
Danai-Eleni Michailidou ◽  
...  
Keyword(s):  
Species Richness ◽  
Species Composition ◽  
Large Scale ◽  
Regional Scale ◽  
Elevational Gradient ◽  
Life Forms ◽  
Species Pool ◽  
Diversity Patterns ◽  
Β Diversity ◽  
Α Diversity

Elevational gradients provide a unique opportunity to explore species responses to changing environmental conditions. Here, we focus on an elevational gradient in Crete, a climate-vulnerable Mediterranean plant biodiversity hotspot and explore the diversity patterns and underlying mechanisms of different plant life forms. We found that the significant differences in life forms’ elevational and environmental ranges are reflected in α- diversity (species richness at local scale), γ-diversity (species richness at regional scale) and β-diversity (variation in species composition). The α- and γ-diversity decreased with elevation, while β-diversity followed a hump-shaped relationship, with the peak varying between life forms. However, β-deviation (deviation from null expectations) varied significantly with elevation but was life formindependent. This suggests that species composition is shaped by the size of the available species pool which depends on life form, but also by other deterministic or stochastic processes that act in a similar way for different life forms. The strength of these processes varies with elevation, with hotter–drier conditions and increased human activities filtering species composition at lowlands and large-scale processes determining the species pool size overriding local ecological processes at higher elevations.

scholarly journals Functional diversity plays a role in driving β-diversity: Or does it?

2019 ◽  
Author(s):  
David Murray-Stoker
Keyword(s):  
Model Selection ◽  
Path Analysis ◽  
Functional Diversity ◽  
Environmental Variation ◽  
Species Pool ◽  
Β Diversity ◽  
Theory And Modeling

AbstractPatrick and Brown (2018) suggest that functional diversity of the species pool has an important role in generating β-diversity. Using a combination of path analysis and model selection, they ostensibly provide support for this hypothesis; however, they neglected to put theory and modeling into proper ecological and statistical context. Here, I present a re-analysis of their data. I conclude that the drivers of β-diversity are variable, with functional diversity typically having a reduced, if any, role compared to consistently stronger roles played by γ-diversity or environmental variation on structuring β-diversity.

Patterns in diversity and composition of the microbenthos of subarctic intertidal beaches with different morphodynamics

2020 ◽  
Vol 648 ◽  
pp. 19-38
Author(s):  
AI Azovsky ◽  
YA Mazei ◽  
MA Saburova ◽  
PV Sapozhnikov
Keyword(s):  
Species Abundance ◽  
Abundance Ratio ◽  
Wave Action ◽  
Coarse Grained ◽  
Sediment Properties ◽  
Β Diversity ◽  
Α Diversity ◽  
Wide Range ◽  
Similar Mode ◽  
Abundance And Diversity

Diversity and composition of benthic diatom algae and ciliates were studied at several beaches along the White and Barents seas: from highly exposed, reflective beaches with coarse-grained sands to sheltered, dissipative silty-sandy flats. For diatoms, the epipelic to epipsammic species abundance ratio was significantly correlated with the beach index and mean particle size, while neither α-diversity measures nor mean cell length were related to beach properties. In contrast, most of the characteristics of ciliate assemblages (diversity, total abundance and biomass, mean individual weight and percentage of karyorelictids) demonstrated a strong correlation to beach properties, remaining low at exposed beaches but increasing sharply in more sheltered conditions. β-diversity did not correlate with beach properties for either diatoms or ciliates. We suggest that wave action and sediment properties are the main drivers controlling the diversity and composition of the intertidal microbenthos. Diatoms and ciliates, however, demonstrated divergent response to these factors. Epipelic and epipsammic diatoms exhibited 2 different strategies to adapt to their environments and therefore were complementarily distributed along the environmental gradient and compensated for each other in diversity. Most ciliates demonstrated a similar mode of habitat selection but differed in their degree of tolerance. Euryporal (including mesoporal) species were relatively tolerant to wave action and therefore occurred under a wide range of beach conditions, though their abundance and diversity were highest in fine, relatively stable sediments on sheltered beaches, whereas the specific interstitial (i.e. genuine microporal) species were mostly restricted to only these habitats.

Effects of Manuring and Fertilizing on the Fusarium Populations in Grassland Soils

1997 ◽  
Vol 25 (3) ◽  
pp. 721-722
Author(s):  
A. Adler ◽  
H. Lew ◽  
C. Berger
Keyword(s):  
Grassland Soils

scholarly journals Effect of hay type on cecal and fecal microbiome and fermentation parameters in horses

2020 ◽  
Author(s):  
Rachel J Sorensen ◽  
James S Drouillard ◽  
Teresa L Douthit ◽  
Qinghong Ran ◽  
Douglas G Marthaler ◽  
...  
Keyword(s):  
Fixed Effects ◽  
Volatile Fatty Acids ◽  
Random Effect ◽  
Alpha Diversity ◽  
Sampling Location ◽  
Rrna Gene ◽  
Illumina Hiseq ◽  
Fecal Microbiome ◽  
Β Diversity ◽  
Fermentation Parameters

Abstract The effect of hay type on the microbiome of the equine gastrointestinal tract is relatively unexplored. Our objective was to characterize the cecal and fecal microbiome of mature horses consuming alfalfa or Smooth Bromegrass (brome) hay. Six cecally cannulated horses were used in a split plot design run as a crossover in 2 periods. Whole plot treatment was ad libitum access to brome or alfalfa hay fed over two 21-d acclimation periods with subplots of sampling location (cecum and rectum) and sampling hour. Each acclimation period was followed by a 24-h collection period where cecal and fecal samples were collected every 3 h for analysis of pH and volatile fatty acids (VFA). Fecal and cecal samples were pooled and sent to a commercial lab (MR DNA, Shallowater, TX) for amplification of the V4 region of the 16S rRNA gene and sequenced using Illumina HiSeq. Main effects of hay on VFA, pH, and taxonomic abundances were analyzed using the MIXED procedure of SAS 9.4 with fixed effects of hay, hour, location, period, all possible interactions and random effect of horse. Alpha and β diversity were analyzed using the R Dame package. Horses fed alfalfa had greater fecal than cecal pH (P ≤ 0.05) whereas horses fed brome had greater cecal than fecal pH (P ≤ 0.05). Regardless of hay type, total volatile fatty acid (VFA) concentrations were greater (P ≤ 0.05) in the cecum than in feces, and alfalfa resulted in greater (P ≤ 0.05) VFA concentrations than brome in both sampling locations. Alpha diversity was greater (P ≤ 0.05) in fecal compared to cecal samples. Microbial community structure within each sampling location and hay type differed from one another (P ≤ 0.05). Bacteroidetes were greater (P ≤ 0.05) in the cecum compared to the rectum, regardless of hay type. Firmicutes and Firmicutes:Bacteroidetes were greater (P ≤ 0.05) in the feces compared to cecal samples of alfalfa-fed horses. In all, fermentation parameters and bacterial abundances were impacted by hay type and sampling location in the hindgut.

scholarly journals Oral and Intravenous Iron Therapy Differentially Alter the On- and Off-Tumor Microbiota in Anemic Colorectal Cancer Patients

Cancers ◽  
2021 ◽  
Vol 13 (6) ◽  
pp. 1341
Author(s):  
Oliver Phipps ◽  
Hafid O. Al-Hassi ◽  
Mohammed N. Quraishi ◽  
Edward A. Dickson ◽  
Jonathan Segal ◽  
...  
Keyword(s):  
Colorectal Cancer ◽  
Ferrous Sulphate ◽  
Intravenous Iron ◽  
Oral Iron ◽  
Iron Therapy ◽  
Deficiency Anemia ◽  
Ferric Carboxymaltose ◽  
Β Diversity ◽  
Post Surgery ◽  
Intravenous Iron Therapy

Iron deficiency anemia is a common complication of colorectal cancer and may require iron therapy. Oral iron can increase the iron available to gut bacteria and may alter the colonic microbiota. We performed an intervention study to compare oral and intravenous iron therapy on the colonic tumor-associated (on-tumor) and paired non-tumor-associated adjacent (off-tumor) microbiota. Anemic patients with colorectal adenocarcinoma received either oral ferrous sulphate (n = 16) or intravenous ferric carboxymaltose (n = 24). On- and off-tumor biopsies were obtained post-surgery and microbial profiling was performed using 16S ribosomal RNA analysis. Off-tumor α- and β-diversity were significantly different between iron treatment groups. No differences in on-tumor diversity were observed. Off-tumor microbiota of oral iron-treated patients showed higher abundances of the orders Clostridiales, Cytophagales, and Anaeroplasmatales compared to intravenous iron-treated patients. The on-tumor microbiota was enriched with the orders Lactobacillales and Alteromonadales in the oral and intravenous iron groups, respectively. The on- and off-tumor microbiota associated with intravenous iron-treated patients infers increased abundances of enzymes involved in iron sequestration and anti-inflammatory/oncogenic metabolite production, compared to oral iron-treated patients. Collectively, this suggests that intravenous iron may be a more appropriate therapy to limit adverse microbial outcomes compared to oral iron.

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