Detection of quantitative trait loci for wheat (Triticum aestivum L.) heading and flowering date

2019 ◽  
Vol 157 (1) ◽  
pp. 20-30
Author(s):  
C. H. Zhao ◽  
H. Sun ◽  
C. Liu ◽  
G. M. Yang ◽  
X. J. Liu ◽  
...  

AbstractHeading date (HD) and flowering date (FD) are critical for yield potential and stability, so understanding their genetic foundation is of great significance in wheat breeding. Three related recombinant inbred line populations with a common female parent were developed to identify quantitative trait loci (QTL) for HD and FD in four environments. In total, 25 putative additive QTL and 20 pairwise epistatic effect QTL were detected in four environments. The additive QTL were distributed across 17 wheat chromosomes. Of these, QHd-1A, QHd-1D, QHd-2B, QHd-3B, QHd-4A, QHd-4B and QHd-6D were major and stable QTL for HD. QFd-1A, QFd-2B, QFd-4A and QFd-4B were major and stable QTL for FD. In addition, an epistatic interaction test showed that epistasis played important roles in controlling wheat HD and FD. Genetic relationships between HD/FD and five yield-related traits (YRTs) were characterized and ten QTL clusters (C1–C10) simultaneously controlling YRTs and HD/FD were identified. The present work laid a genetic foundation for improving yield potential in wheat molecular breeding programmes.

Agronomy ◽  
2020 ◽  
Vol 11 (1) ◽  
pp. 22
Author(s):  
Chon-Sik Kang ◽  
Young-Jun Mo ◽  
Kyeong-Min Kim ◽  
Kyeong-Hoon Kim ◽  
Jae-Buhm Chun ◽  
...  

Selecting wheat with favorable spike characteristics has been a popular breeding strategy to improve sink capacity and yield potential. In the present study, quantitative trait loci (QTLs) for yield potential traits were identified using a recombinant inbred line (RIL) population derived from the cross between Taejoong and Keumkang, two Korean wheat cultivars. A linkage map encompassing a total genetic length of 6544.8 cM was constructed using 838 single nucleotide polymorphisms from the 35K Axiom Wheat Breeder’s Array. We detected eight QTLs for four yield potential traits that are consistently identified in at least two of the three environments, that is, one for days to heading date (QDHD-1 on chromosome 7B), three for spike length (QSL-1, QSL-2, and QSL-3 on chromosomes 1D, 5A, and 6A, respectively), one for tiller number (QTN-1 on chromosome 5B), and three for length of center rachis (QLCR-1, QLCR-2, and QLCR-3 on chromosomes 1B, 5B, and 6A, respectively). Notably, Taejoong contributed the alleles for long spike at all three spike length QTLs with the additive effects of 0.6 cm, 0.6 cm, and 0.9 cm at QSL-1, QSL-2, and QSL-3, respectively. No significant two-way or three-way interaction was observed among QSL-1, QSL-2, and QSL-3, indicating that pyramiding the Taejoong alleles at the three QTLs can increase spike length additively. While the Taejoong alleles at QSL-1, QSL-2, and QSL-3 were associated with increased days to heading date, more kernels per spike, and reduced tiller number per plant, the extent of the pleiotropic effects were different among the three QTLs. Due to the limited number of molecular markers and mapping resolution, further work is required to narrow down the identified QTLs and characterize their effects more precisely. Our results would provide useful information for modulating spike characteristics and improving yield potential in wheat breeding programs.


2019 ◽  
Vol 132 (11) ◽  
pp. 3023-3033 ◽  
Author(s):  
Firdissa E. Bokore ◽  
Richard D. Cuthbert ◽  
Ron E. Knox ◽  
Arti Singh ◽  
Heather L. Campbell ◽  
...  

Agronomy ◽  
2020 ◽  
Vol 10 (9) ◽  
pp. 1294 ◽  
Author(s):  
Rosa Mérida-García ◽  
Sergio Gálvez ◽  
Etienne Paux ◽  
Gabriel Dorado ◽  
Laura Pascual ◽  
...  

The practical use of molecular markers is facilitated by cost-effective detection techniques. In this work, wheat insertion site-based polymorphisms (ISBP) markers were set up for genotyping using high-resolution melting analysis (HRM). Polymorphic HRM-ISBP assays were developed for wheat chromosomes 4A and 3B and used for wheat variability assessment. The marker sequences were mapped against the wheat genome reference sequence, targeting interesting genes. Those genes were located within or in proximity to previously described quantitative trait loci (QTL) or meta-quantitative trait loci (MQTL) for drought and heat stress tolerance, and also yield and yield related traits. Eighteen of the markers used tagged drought related genes and, interestingly, eight of the genes were differentially expressed under different abiotic stress conditions. These results confirmed HRM as a cost-effective and efficient tool for wheat breeding programs.


2006 ◽  
Vol 56 (4) ◽  
pp. 341-349 ◽  
Author(s):  
Le-Hung Linh ◽  
Feng-Xue Jin ◽  
Kyung-Ho Kang ◽  
Young-Tae Lee ◽  
Soo-Jin Kwon ◽  
...  

Author(s):  
K. Fujino ◽  
T. Sato ◽  
H. Kiuchi ◽  
H. Kikuchi ◽  
Y. Nonoue ◽  
...  

Euphytica ◽  
2014 ◽  
Vol 197 (2) ◽  
pp. 191-200 ◽  
Author(s):  
Seonghee Lee ◽  
Melisa H. Jia ◽  
Yulin Jia ◽  
Guangjie Liu

2020 ◽  
Vol 18 (3) ◽  
pp. 130-142
Author(s):  
Harun Bektas ◽  
Christopher Earl Hohn ◽  
John Giles Waines

AbstractThe genetics of the root system is still not dissected for wheat and lack of knowledge prohibits the use of marker-assisted selection in breeding. To understand the genetic mechanism of root development, Synthetic W7984 × Opata M85 doubled-haploid (SynOpDH) mapping population was evaluated for root and shoot characteristics in PVC tubes until maturity. Two major quantitative trait loci (QTLs) for total root biomass were detected on homoeologous chromosomes 2A and 2D with logarithm of the odds scores between 6.25–10.9 and 11.8–20.86, and total phenotypic effects between 12.7–17.7 and 26.6–40.04% in 2013 and 2014, respectively. There was a strong correlation between days to anthesis and root and shoot biomass accumulation (0.50–0.81). The QTL for biomass traits on chromosome 2D co-locates with QTL for days to anthesis. The effect of extended vegetative growth, caused by photoperiod sensitivity (Ppd) genes, on biomass accumulation was always hypothesized, this is the first study to genetically support this theory.


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