An Acoustic Bottom Classification Survey of Strangford Lough, Northern Ireland

Author(s):  
B.H. Magorrian ◽  
M. Service ◽  
W. Clarke

As part of an investigation into the impact of commercial trawling on the benthos of Strangford Lough a map of the distribution of the benthic communities in the Lough was required. To provide this an acoustic bottom classification survey of the Lough was carried out using a commercially available system, RoxAnn. RoxAnn processes the information from a conventional echo-sounder to determine the nature of different substrata. Underwater cameras were used to obtain ground truth data to compare with the RoxAnn data. Used in conjunction, the two surveys provided valuable information on the different bottom substrata and associated epibenthic communities present in the Lough.

2021 ◽  
Vol 22 (1) ◽  
Author(s):  
An Zheng ◽  
Michael Lamkin ◽  
Yutong Qiu ◽  
Kevin Ren ◽  
Alon Goren ◽  
...  

Abstract Background A major challenge in evaluating quantitative ChIP-seq analyses, such as peak calling and differential binding, is a lack of reliable ground truth data. Accurate simulation of ChIP-seq data can mitigate this challenge, but existing frameworks are either too cumbersome to apply genome-wide or unable to model a number of important experimental conditions in ChIP-seq. Results We present ChIPs, a toolkit for rapidly simulating ChIP-seq data using statistical models of key experimental steps. We demonstrate how ChIPs can be used for a range of applications, including benchmarking analysis tools and evaluating the impact of various experimental parameters. ChIPs is implemented as a standalone command-line program written in C++ and is available from https://github.com/gymreklab/chips. Conclusions ChIPs is an efficient ChIP-seq simulation framework that generates realistic datasets over a flexible range of experimental conditions. It can serve as an important component in various ChIP-seq analyses where ground truth data are needed.


Author(s):  
N. Milisavljevic ◽  
D. Closson ◽  
F. Holecz ◽  
F. Collivignarelli ◽  
P. Pasquali

Land-cover changes occur naturally in a progressive and gradual way, but they may happen rapidly and abruptly sometimes. Very high resolution remote sensed data acquired at different time intervals can help in analyzing the rate of changes and the causal factors. In this paper, we present an approach for detecting changes related to disasters such as an earthquake and for mapping of the impact zones. The approach is based on the pieces of information coming from SAR (Synthetic Aperture Radar) and on their combination. The case study is the 22 February 2011 Christchurch earthquake. <br><br> The identification of damaged or destroyed buildings using SAR data is a challenging task. The approach proposed here consists in finding amplitude changes as well as coherence changes before and after the earthquake and then combining these changes in order to obtain richer and more robust information on the origin of various types of changes possibly induced by an earthquake. This approach does not need any specific knowledge source about the terrain, but if such sources are present, they can be easily integrated in the method as more specific descriptions of the possible classes. <br><br> A special task in our approach is to develop a scheme that translates the obtained combinations of changes into ground information. Several algorithms are developed and validated using optical remote sensing images of the city two days after the earthquake, as well as our own ground-truth data. The obtained validation results show that the proposed approach is promising.


2019 ◽  
Author(s):  
Pakhrur Razi

Located on the mountainous area, Kelok Sembilan flyover area in West Sumatra, Indonesia has a long history of land deformation, therefore monitoring and analyzing as continuously is a necessity to minimize the impact. Notably, in the rainy season, the land deformation occurs along this area. The zone is crucial as the center of transportation connection in the middle of Sumatra. Quasi-Persistent Scatterer (Q-PS) Interferometry technique was applied for extracting information of land deformation on the field from time to time. Not only does the method have high performance for detecting land deformation but also improve the number of PS point, especially in a non-urban area. This research supported by 90 scenes of Sentinel-1A (C-band) taken from October 2014 to November 2017 for ascending and descending orbit with VV and VH polarization in 5 × 20 m (range × azimuth) resolution. Both satellite orbits detected two critical locations of land deformation namely as zone A and Zone B, which located in positive steep slope where there is more than 500 mm movement in the Line of Sight (LOS) during acquisition time. Deformations in the vertical and horizontal direction for both zone, are 778.9 mm, 795.7 mm and 730.5 mm, 751.7 mm, respectively. Finally, the results were confirmed by ground truth data using Unmanned Aerial Vehicle (UAV) observation.


Author(s):  
T. Wu ◽  
B. Vallet ◽  
M. Pierrot-Deseilligny ◽  
E. Rupnik

Abstract. Stereo dense matching is a fundamental task for 3D scene reconstruction. Recently, deep learning based methods have proven effective on some benchmark datasets, for example Middlebury and KITTI stereo. However, it is not easy to find a training dataset for aerial photogrammetry. Generating ground truth data for real scenes is a challenging task. In the photogrammetry community, many evaluation methods use digital surface models (DSM) to generate the ground truth disparity for the stereo pairs, but in this case interpolation may bring errors in the estimated disparity. In this paper, we publish a stereo dense matching dataset based on ISPRS Vaihingen dataset, and use it to evaluate some traditional and deep learning based methods. The evaluation shows that learning-based methods outperform traditional methods significantly when the fine tuning is done on a similar landscape. The benchmark also investigates the impact of the base to height ratio on the performance of the evaluated methods. The dataset can be found in https://github.com/whuwuteng/benchmark_ISPRS2021.


2021 ◽  
Vol 8 ◽  
Author(s):  
Laurie Isabel ◽  
David Beauchesne ◽  
Chris McKindsey ◽  
Philippe Archambault

The estuary and the Gulf of St. Lawrence (EGSL), eastern Canada form a vast inland sea that is subjected to numerous anthropogenic pressures. Management tools are needed to detect and quantify their effect on benthic communities. The aims of this study are to analyze the spatial distribution of epibenthic communities in the EGSL and quantify the impact of important pressures on them to identify indicator taxa. Epibenthic communities were sampled at 1314 EGSL sites between 2011 and 2018 by bottom trawling. Cluster analyses revealed the presence of six distinct epibenthic communities that seem to be strongly influenced by oxygen concentration. Threshold analyses confirm that oxygen is an important predictor of epibenthic community composition and distribution. A major oxygen threshold is observed around 50–100 μmol O2 L–1, resulting in a shift of community type. At these concentrations and below, opportunistic taxa dominate the community while sensitive taxa are absent or present at very low abundance. Biomass of the latter only starts to increase when oxygen concentrations reach 150 μmol O2 L–1. The species Actinostola callosa, Actinauge cristata, Ctenodiscus crispatus, and Brisaster fragilis were identified as good indicators for detecting this impact threshold forepibenthic communities. This study provides threshold-based indicator species that help to establish and monitor the ecological state of epibenthic communities in a marine ecosystem exposed to multiple pressures.


2021 ◽  
Vol 73 (04) ◽  
pp. 24-28
Author(s):  
Judy Feder

“We’re going to the Moon, and we’re going there to stay this time,” has become a NASA mantra as the US competes with other countries, including China and Russia (https://jpt. spe.org/esa-roscosmos-to-mine-oxygen-water-from-moon-rocks-as-nasa-eyes-first-artemis-lunar-mission), to be the first to put humans on the Moon and Mars. The race will rely heavily on using resources available on the planetary bodies - or in-situ resource utilization (ISRU). Chief among these is water, which has been called “the oil of space.” As NASA prepares for Artemis mission astronauts to land on the Moon in 2024, it will fly at least two preliminary missions to look for water and gather information about the lunar south pole. The Polar Resources Ice-Mining Experiment (PRIME-1) and Volatiles Investigating Polar Exploration Rover (VIPER) missions, which will be launched in late 2022 and 2023, respectively, will be the first missions to study ISRU on another celestial body. They will also mark the first time NASA will robotically sample and analyze for ice from below the surface. And they will use technologies transferred and adapted from oil and gas exploration. Reconnaissance Missions Data from nearly 3 decades of lunar orbiter and impactor missions suggest that the Moon’s “soils,” particularly at its south pole and other regions, could contain hundreds of millions of gallons of water that could eventually be harvested and converted to oxygen, fuel, or drinkable water for human use on the Moon, Mars, and beyond. But, at what concentrations? In what kinds of soils? And is the water in a form that’s accessible? Most of the information we have about the presence of water-ice on the Moon comes from orbital measurements. The only direct evidence acquired to date came in 2009 from a sensing satellite aboard a spacecraft that was purposely crashed in the Cabeus crater. The material ejected as a result of the impact was analyzed with a spectrometer to reveal the presence of 5.6%±2.9% water-ice by mass. The form, distribution, composition, and quantity of the water-ice remain largely uncertain. The only way to reduce this uncertainty is to obtain ground-truth data by drilling exploratory boreholes in the crater. This will be the purpose of the PRIME-1 and VIPER missions. PRIME-1 will last a week to 10 days, during which a robot will deploy a drill and mass spectrometer to harvest and preliminarily evaluate moon-ice for quality and regional heights and to determine how much of the ice is lost to a process known as sublimation, wherein the water transforms directly from solid ice into vapor, rather than first going through a liquid phase. In addition to ice, PRIME-1 will gather samples including rock samples to help date the sequence of impact events on the Moon, core tube samples to capture ancient solar wind trapped in regolith layers (unconsolidated, inorganic rocky material), and paired samples of material to characterize the presence of volatiles and to assess geotechnical differences between materials inside and outside permanent shadows. The samples will be returned to Earth and studied to characterize and document the regional geology, including the small, permanently shadowed regions. The data from the mission will help scientists understand how a mobile robot to be used on the subsequent VIPER mission can search for water at the Moon’s pole, and how much water may be available to use as NASA plans to establish a sustainable human presence on the Moon by the end of the decade (Fig. 1).


2004 ◽  
Vol 3 (3) ◽  
pp. 265-271 ◽  
Author(s):  
D.P. Glavin ◽  
J.P. Dworkin ◽  
M. Lupisella ◽  
G. Kminek ◽  
J.D. Rummel

Chemical and microbiological studies of the impact of terrestrial contamination of the lunar surface during the Apollo missions could provide valuable data to help refine future Mars surface exploration plans and planetary protection requirements for a human mission to Mars. NASA and ESA have outlined new visions for solar system exploration that will include a series of lunar robotic missions to prepare for and support a human return to the Moon, and future human exploration of Mars and other destinations. Under the Committee on Space Research's (COSPAR's) current planetary protection policy for the Moon, no decontamination procedures are required for outbound lunar spacecraft. Nonetheless, future in situ investigations of a variety of locations on the Moon by highly sensitive instruments designed to search for biologically derived organic compounds would help assess the contamination of the Moon by lunar spacecraft and Apollo astronauts. These studies could also provide valuable ‘ground truth’ data for Mars sample return missions and help define planetary protection requirements for future Mars bound spacecraft carrying life detection experiments.


1993 ◽  
Vol 1993 (1) ◽  
pp. 141-145 ◽  
Author(s):  
Irving A. Mendelssohn ◽  
Mark W. Hester ◽  
John M. Hill

ABSTRACT The impact of oil spills on coastal environments and the ability of these systems to exhibit long-term recovery has received increased attention in recent years. Although oil spills can have significant short-term impacts on coastal marshes, the long-term effects and eventual recovery are not well documented. Estuarine marshes have sometimes been reported to exhibit slow recovery after oil spills, whereas in other instances they appear to have great resiliency, with complete recovery after one or two years. To document and understand this phenomenon better, we have investigated the long-term recovery of a south Louisiana estuarine marsh exposed to an accidental spill of crude oil. Although a pipeline rupture releasing Louisiana crude oil caused the near complete mortality of a brackish marsh dominated by Spartina patens and S. alterniflora, this marsh completely recovered four years after the spill with no differences in plant species cover between oiled and reference marshes. Remotely sensed imagery of the study site confirmed the relatively rapid recovery demonstrated by the ground truth data. Louisiana's coastal marshes are naturally experiencing rapid rates of deterioration. Land loss rates, determined from aerial imagery, at the spill site and adjacent reference areas before and after the spill demonstrated that the long-term loss rates were not affected by the spill event.


Author(s):  
M. Service ◽  
B.H. Magorrian

Side-scan sonar and underwater video were used to determine the impact of a trawl fishery on an epibenthic community associated with the horse mussel, Modiolus modiolus in a Northern Ireland sea lough. The presence of marks caused by trawl otter-boards on the sediments could be clearly seen using side-scan sonar and changes to the epibenthos are described from the video survey. It is apparent from the side-scan sonar survey that changes have occurred in the structure of the superficial sediments on heavily trawled areas. However, there was no clear indication of temporal changes. The utility of side-scan sonar coupled with GIS techniques to detect temporal and spatial effects is discussed.


2017 ◽  
Vol 44 (1) ◽  
pp. 1 ◽  
Author(s):  
Richard A.F. Grieve

The current record of large-scale impact on Earth consists of close to 200 impact structures and some 30 impact events recorded in the stratigraphic record, only some of which are related to known structures. It is a preservation sample of a much larger production population, with the impact rate on Earth being higher than that of the moon. This is due to the Earth’s larger physical and gravitational cross-sections, with respect to asteroidal and cometary bodies entering the inner solar system. While terrestrial impact structures have been studied as the only source of ground-truth data on impact as a planetary process, it is becoming increasingly acknowledged that large-scale impact has had its effects on the geologic history of the Earth, itself. As extremely high energy events, impacts redistribute, disrupt and reprocess target lithologies, resulting in topographic, structural and thermal anomalies in the upper crust. This has resulted in many impact structures being the source of natural resources, including some world-class examples, such as gold and uranium at Vredefort, South Africa, Ni–Cu–PGE sulphides at Sudbury, Canada and hydrocarbons from the Campeche Bank, Mexico. Large-scale impact also has the potential to disrupt the terrestrial biosphere. The most devastating known example is the evidence for the role of impact in the Cretaceous–Paleocene (K–Pg) mass extinction event and the formation of the Chicxulub structure, Mexico. It also likely had a role in other, less dramatic, climatic excursions, such as the Paleocene–Eocene–Thermal Maximum (PETM) event. The impact rate was much higher in early Earth history and, while based on reasoned speculation, it is argued that the early surface of the Hadean Earth was replete with massive impact melt pools, in place of the large multiring basins that formed on the lower gravity moon in the same time-period. These melt pools would differentiate to form more felsic upper lithologies and, thus, are a potential source for Hadean-aged zircons, without invoking more modern geodynamic scenarios. The Earth-moon system is unique in the inner solar system and currently the best working hypothesis for its origin is a planetary-scale impact with the proto-Earth, after core formation at ca. 4.43 Ga. Future large-scale impact is a low probability event but with high consequences and has the potential to create a natural disaster of proportions unequalled by other geologic processes and threaten the extended future of human civilization, itself.RÉSUMÉLe bilan actuel de traces de grands impacts sur la Terre se compose de près de 200 astroblèmes et d'une trentaine d’impacts enregistrés dans la stratigraphie, dont seulement certains sont liés à des astroblèmes connus. Il s'agit d'échantillons préservés sur une population d’événements beaucoup plus importante, le taux d'impact sur Terre étant supérieur à celui de la lune. Cela tient aux plus grandes sections transversales physiques et gravitationnelles de la Terre sur la trajectoire des astéroïdes et comètes qui pénètrent le système solaire interne. Alors que les astroblèmes terrestres ont été étudiés comme étant la seule source de données avérée d’impacts en tant que processus planétaire, de plus en plus on reconnaît que les grands impacts ont eu des effets sur l'histoire géologique de la Terre. À l’instar des événements d'énergie extrême, les impacts redistribuent, perturbent et remanient les lithologies impliquées, provoquant dans la croûte terrestre supérieure des anomalies topographiques, structurelles et thermiques. Il en a résulté de nombreux astroblèmes à l’origine de ressources naturelles, dont certains exemples de classe mondiale tels que l'or et l'uranium à Vredefort en Afrique du Sud, les sulfures de Ni–Cu–PGE à Sudbury au Canada, et les hydrocarbures du Banc de Campeche au Mexique. Les grands impacts peuvent également perturber la biosphère terrestre. L'exemple le plus dévastateur connu nous est donné des indices du rôle de l'impact dans l'extinction de masse au Crétacé–Paléogène (K–Pg) et la formation de la structure de Chicxulub, au Mexique. Il a également probablement joué un rôle dans d'autres événements climatiques extraordinaires moins dramatiques, comme le Maximum thermal du Paleocène–Eocène (PETM). Le taux d'impact était beaucoup plus élevé au début de l'histoire de la Terre et, tout en étant basé sur une spéculation raisonnée, on fait valoir que la surface précoce de la Terre à l’Hadéen était tapissée de grands bassins en fusion, au lieu de grands bassins à couronnes multiples tels ceux qui se sont formés à la même période sur la lune ayant une gravité inférieure. Ces bassins en fusion se seraient différenciées pour constituer des lithologies plus felsiques sur le dessus, devenant ainsi une source potentielle de zircons d’âge Hadéen, sans qu’il soit nécessaire d’invoquer des scénarios géodynamiques plus récents. Le système Terre-lune est unique dans le système solaire interne. Actuellement la meilleure hypothèse de travail pour son origine est un impact planétaire avec la proto-Terre, après la formation du noyau à env. 4,43 Ga. La probabilité d’un futur grand impact est faible mais comporte des conséquences capables d’engendrer un désastre naturel aux proportions inégalées comparé à d'autres processus géologiques, menaçant l'avenir de la civilisation humaine elle-même.


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