Impact of including dissolved organic matter in a global ocean box model on simulated distributions and fluxes of carbon and nitrogen

2002 ◽  
Vol 29 (9) ◽  
pp. 17-1-17-4 ◽  
Author(s):  
Ekaterina E. Popova ◽  
Thomas R. Anderson
2015 ◽  
Vol 12 (22) ◽  
pp. 6823-6836 ◽  
Author(s):  
Y. Zhang ◽  
H. Xie

Abstract. Rates and apparent quantum yields of photomineralization (AQYDOC) and photomethanification (AQYCH4) of chromophoric dissolved organic matter (CDOM) in Saguenay River surface water were determined at three widely differing dissolved oxygen concentrations ([O2]) (suboxic, air saturation, and oxygenated) using simulated-solar radiation. Photomineralization increased linearly with CDOM absorbance photobleaching for all three O2 treatments. Whereas the rate of photochemical dissolved organic carbon (DOC) loss increased with increasing [O2], the ratio of fractional DOC loss to fractional absorbance loss showed an inverse trend. CDOM photodegradation led to a higher degree of mineralization under suboxic conditions than under oxic conditions. AQYDOC determined under oxygenated, suboxic, and air-saturated conditions increased, decreased, and remained largely constant with photobleaching, respectively; AQYDOC obtained under air saturation with short-term irradiations could thus be applied to longer exposures. AQYDOC decreased successively from ultraviolet B (UVB) to ultraviolet A (UVA) to visible (VIS), which, alongside the solar irradiance spectrum, points to VIS and UVA being the primary drivers for photomineralization in the water column. The photomineralization rate in the Saguenay River was estimated to be 2.31 × 108 mol C yr−1, accounting for only 1 % of the annual DOC input into this system. Photoproduction of CH4 occurred under both suboxic and oxic conditions and increased with decreasing [O2], with the rate under suboxic conditions ~ 7–8 times that under oxic conditions. Photoproduction of CH4 under oxic conditions increased linearly with photomineralization and photobleaching. Under air saturation, 0.00057 % of the photochemical DOC loss was diverted to CH4, giving a photochemical CH4 production rate of 4.36 × 10−6 mol m−2 yr−1 in the Saguenay River and, by extrapolation, of (1.9–8.1) × 108 mol yr−1 in the global ocean. AQYCH4 changed little with photobleaching under air saturation but increased exponentially under suboxic conditions. Spectrally, AQYCH4 decreased sequentially from UVB to UVA to VIS, with UVB being more efficient under suboxic conditions than under oxic conditions. On a depth-integrated basis, VIS prevailed over UVB in controlling CH4 photoproduction under air saturation while the opposite held true under O2-deficiency. An addition of micromolar levels of dissolved dimethyl sulfide (DMS) substantially increased CH4 photoproduction, particularly under O2-deficiency; DMS at nanomolar ambient concentrations in surface oceans is, however, unlikely a significant CH4 precursor. Results from this study suggest that CDOM-based CH4 photoproduction only marginally contributes to the CH4 supersaturation in modern surface oceans and to both the modern and Archean atmospheric CH4 budgets, but that the photochemical term can be comparable to microbial CH4 oxidation in modern oxic oceans. Our results also suggest that anoxic microniches in particulate organic matter and phytoplankton cells containing elevated concentrations of precursors of the methyl radical such as DMS may provide potential hotspots for CH4 photoproduction.


2013 ◽  
Vol 10 (11) ◽  
pp. 7207-7217 ◽  
Author(s):  
Y. Yamashita ◽  
Y. Nosaka ◽  
K. Suzuki ◽  
H. Ogawa ◽  
K. Takahashi ◽  
...  

Abstract. Chromophoric dissolved organic matter (CDOM) ubiquitously occurs in marine environments and plays a significant role in the marine biogeochemical cycles. Basin scale distributions of CDOM have recently been surveyed in the global ocean and indicate that quantity and quality of oceanic CDOM are mainly controlled by in situ production and photobleaching. However, factors controlling the spectral parameters of CDOM in the UV region, i.e., spectral slope of CDOM determined at 275–295 nm (S275–295) and the ratio of two spectral slope parameters (SR); the ratio of S275–295 to S350–400, have not been well documented. To evaluate the factor controlling the spectral characteristics of CDOM in the UV region in the open ocean, we determined the quantitative and qualitative characteristics of CDOM in the subarctic and subtropical surface waters (5–300 m) of the western North Pacific. Absorption coefficients at 320 nm in the subarctic region were higher than those in the subtropical region throughout surface waters, suggesting that magnitudes of photobleaching were different between the two regions. The values of S275–295 and SR were also higher in the subtropical region than the subarctic region. The dark microbial incubation showed biodegradation of DOM little affected S275–295, but slightly decreased SR. On the other hand, increases in S275–295 and relative stableness of SR were observed during photo-irradiation incubations respectively. These experimental results indicated that photobleaching of CDOM mainly induced qualitative differences in CDOM at UV region between the subarctic and subtropical surface waters. The results of this study imply that S275–295 can be used as a tracer of photochemical history of CDOM in the open ocean.


2015 ◽  
Vol 29 (7) ◽  
pp. 917-934 ◽  
Author(s):  
T. S. Catalá ◽  
I. Reche ◽  
M. Álvarez ◽  
S. Khatiwala ◽  
E. F. Guallart ◽  
...  

2015 ◽  
Vol 12 (16) ◽  
pp. 14303-14341 ◽  
Author(s):  
Y. Zhang ◽  
H. Xie

Abstract. Rates and apparent quantum yields of photomineralization (AQYDOC) and photomethanification (AQYCH4) of chromophoric dissolved organic matter (CDOM) in Saguenay River surface water were determined at three widely differing dissolved oxygen concentrations ([O2]) (suboxic, air-saturation, and oxygenated) using simulated-solar radiation. Photomineralization increased linearly with CDOM absorbance photobleaching for all three O2 treatments. Whereas the rate of photochemical dissolved organic carbon (DOC) loss increased with increasing [O2], the ratio of fractional DOC loss to fractional absorbance loss showed an inverse trend. CDOM photodegradation led to a nearly complete mineralization under suboxic conditions but to only a partial mineralization under oxic conditions. AQYDOC determined under oxygenated, suboxic, and air-saturated conditions increased, decreased, and remained largely constant with photobleaching, respectively; AQYDOC obtained under air-saturation with short-term irradiations could thus be applied to longer exposures. AQYDOC decreased successively from ultraviolet B (UVB) to ultraviolet A (UVA) to visible (VIS), which, alongside the solar irradiance spectrum, points to VIS and UVA being the primary drivers for photomineralization in the water column. The photomineralization rate in the Saguenay River was estimated to be 2.31 × 108 mol C yr−1, accounting for only 1 % of the annual DOC input into this system. Photoproduction of CH4 occurred under both suboxic and oxic conditions and increased with decreasing [O2], with the rate under suboxic conditions ~ 7–8 times that under oxic conditions. Photoproduction of CH4 under oxic conditions increased linearly with photomineralization and photobleaching. Under air-saturation, 0.00057 % of the photochemical DOC loss was diverted to CH4, giving a photochemical CH4 production rate of 4.36 × 10−6 mol m−2 yr−1 in the Saguenay River and, by extrapolation, of (1.9–8.1) × 108 mol yr−1 in the global ocean. AQYCH4 changed little with photobleaching under air-saturation but increased exponentially under suboxic conditions. Spectrally, AQYCH4 decreased sequentially from UVB to UVA to VIS, with UVB being more efficient under suboxic conditions than under oxic conditions. On a depth-integrated basis, VIS prevailed over UVB in controlling CH4 photoproduction under air-saturation while the opposite held true under O2-deficiency. An addition of micromolar levels of dissolved dimethyl sulfide (DMS) substantially increased CH4 photoproduction, particularly under O2-deficiency; DMS at nanomolar ambient concentrations in surface oceans is, however, unlikely a significant CH4 precursor. Results from this study suggest that CDOM-based CH4 photoproduction only marginally contributes to the CH4 supersaturation in modern surface oceans and to both the modern and Archean atmospheric CH4 budgets, but that the photochemical term can be comparable to microbial CH4 oxidation in modern oxic oceans. Our results also suggest that anoxic microniches in particulate organic matter and phytoplankton cells containing elevated concentrations of precursors of the methyl radical such as DMS may provide potential hotspots for CH4 photoproduction.


2016 ◽  
Vol 7 (1) ◽  
Author(s):  
Teresa S. Catalá ◽  
Isabel Reche ◽  
Antonio Fuentes-Lema ◽  
Cristina Romera-Castillo ◽  
Mar Nieto-Cid ◽  
...  

Gels ◽  
2021 ◽  
Vol 7 (3) ◽  
pp. 128
Author(s):  
Dennis A. Hansell ◽  
Mónica V. Orellana

Marine dissolved organic matter (DOM) holds ~660 billion metric tons of carbon, making it one of Earth’s major carbon reservoirs that is exchangeable with the atmosphere on annual to millennial time scales. The global ocean scale dynamics of the pool have become better illuminated over the past few decades, and those are very briefly described here. What is still far from understood is the dynamical control on this pool at the molecular level; in the case of this Special Issue, the role of microgels is poorly known. This manuscript provides the global context of a large pool of marine DOM upon which those missing insights can be built.


2015 ◽  
Vol 6 (1) ◽  
Author(s):  
Teresa S. Catalá ◽  
Isabel Reche ◽  
Antonio Fuentes-Lema ◽  
Cristina Romera-Castillo ◽  
Mar Nieto-Cid ◽  
...  

Geosciences ◽  
2020 ◽  
Vol 10 (11) ◽  
pp. 450
Author(s):  
Petr B. Semenov ◽  
Anfisa A. Pismeniuk ◽  
Sergei A. Malyshev ◽  
Marina O. Leibman ◽  
Irina D. Streletskaya ◽  
...  

Permafrost thawing leads to mobilization of the vast carbon pool into modern biogeochemical cycling through the enhanced release of dissolved organic matter (DOM) and production of greenhouse gases (CO2 and CH4). In this work, we focus on the study of methane and DOM distribution and genesis in the ground ice samples of thermodenudational exposure in the Central Yamal (Russian Arctic). We propose that the liberation of the ice-trapped CH4 and generation of CO2 by DOM mineralization are the earliest factors of atmospheric greenhouse gases emission as a result of permafrost thawing. The observed enormously “light ” isotope signatures of methane (δ13C < −80‰, δD < −390‰) found in the tabular ground ice units significantly divergent in morphology and localization within the exposuremay be related to subzero (cryogenic) carbonate reduction a as significant factor of the local methane enrichment. DOM is mainly formed (>88%) by biochemically refractory humic acids. Distribution of the labile protein-like DOM reflects the specific features of carbon and nitrogen cycles in the tabular ground ice and ice wedge samples. Tabular ground ice units are shown to be a significant source of methane and high quality organic matter as well as dissolved inorganic nitrogen (DIN). Ice wedges express a high variation in DOM composition and lability.


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