scholarly journals Analysis of spatial genetic variation reveals genetic divergence among populations of Primula veris associated to contrasting habitats

2017 ◽  
Vol 7 (1) ◽  
Author(s):  
Pablo Deschepper ◽  
Rein Brys ◽  
Miguel A. Fortuna ◽  
Hans Jacquemyn
Taxon ◽  
2007 ◽  
Vol 56 (2) ◽  
pp. 393-408 ◽  
Author(s):  
Nicola G. Bergh ◽  
Terry A. Hedderson ◽  
H. Peter Linder ◽  
William J. Bond

The Auk ◽  
2020 ◽  
Vol 137 (3) ◽  
Author(s):  
R Terry Chesser ◽  
Morton L Isler ◽  
Andrés M Cuervo ◽  
C Daniel Cadena ◽  
Spencer C Galen ◽  
...  

Abstract The Grallaria rufula complex is currently considered to consist of 2 species, G. rufula (Rufous Antpitta) and G. blakei (Chestnut Antpitta). However, it has been suggested that the complex, populations of which occur in humid montane forests from Venezuela to Bolivia, comprises a suite of vocally distinct yet morphologically cryptic species. We sequenced nuclear and mitochondrial DNA for 80 individuals from across the distribution of the complex to determine the extent of genetic variation between and within described taxa. Our results revealed 18 geographically coherent clades separated by substantial genetic divergence: 14 within rufula, 3 within blakei, and 1 corresponding to G. rufocinerea (Bicolored Antpitta), a species with distinctive plumage found to be nested within the complex. Neither G. rufula nor G. blakei as presently defined was monophyletic. Although 6 of the 7 recognized subspecies of G. rufula were monophyletic, several subspecies contained substantial genetic differentiation. Genetic variation was largely partitioned across recognized geographic barriers, especially across deep river valleys in Peru and Colombia. Coalescent modeling identified 17 of the 18 clades as significantly differentiated lineages, whereas analyses of vocalizations delineated 16 biological species within the complex. The G. rufula complex seems unusually diverse even among birds of the humid Andes, a prime location for cryptic speciation; however, the extent to which other dispersal-limited Andean species groups exhibit similar degrees of cryptic differentiation awaits further study.


2007 ◽  
Vol 20 (1) ◽  
pp. 54 ◽  
Author(s):  
Siti R. Ariati ◽  
Daniel J. Murphy ◽  
Stuart Gardner ◽  
Pauline Y. Ladiges

Morphological variation in Acacia victoriae, a species widespread in arid and semi-arid regions of Australia, was analysed by phenetic methods of classification and ordination. Three morphological groups were identified on the basis of phyllode characters and are treated as subspecies. Populations with short, elliptic and tomentose phyllodes are confirmed as A. victoriae subsp. arida Pedley; this form occurs mainly in central Australia. Populations with linear to oblong, non-tomentose phyllodes are referred to subsp. victoriae; this subspecies is the most variable and widely distributed across Australia. Populations with very long, narrow phyllodes, distributed in northern Australia from the Kimberley to Queensland, are described as fasciaria subsp. nov. A small number of non-tomentose specimens with broad elliptic phyllodes from central Australia require further assessment. Thirteen accessions previously sequenced for internal spacer regions and external spacer regions of ribosomal nuclear DNA showed genetic divergence. Six accessions of subsp. fasciaria formed a clade in a parsimony analysis, confirming that the long phyllode form is genetically distinct.


2009 ◽  
Vol 66 (3) ◽  
pp. 462-469 ◽  
Author(s):  
Anette Ungfors ◽  
Niall J. McKeown ◽  
Paul W. Shaw ◽  
Carl André

Abstract Ungfors, A., McKeown, N. J., Shaw, P. W., and André, C. 2009. Lack of spatial genetic variation in the edible crab (Cancer pagurus) in the Kattegat–Skagerrak area. – ICES Journal of Marine Science, 66: 462–469. The stock structure of the edible crab (Cancer pagurus L.) in the Kattegat and Skagerrak was investigated using eight microsatellite DNA loci. Replicate samples, collected 4–6 years apart, were derived from the Kattegat (Grove Bank, 57°N) and the Skagerrak (Lunneviken, 59°N), plus a geographical outgroup sample from the Norwegian Sea (Midsund, 62°N). Genetic differentiation among samples, estimated as global FST = 0.002, was significant (p = 0.03) when the statistical test was based on allele frequencies, but not when based on genotype frequencies. Moreover, all single- and multilocus pairwise tests between samples were non-significant. An analysis of molecular variance, AMOVA, did not reveal significant differentiation between spatial (Kattegat vs. Skagerrak) or temporal (2001/2002 vs. 2006/2007) groups of samples. Power analysis suggested that the loci and sample sizes employed conferred a power of >90% of detecting even low (true FST = 0.002) levels of population structure. Low spatial and temporal genetic structure might be explained by either or both of (i) high levels of contemporary gene flow in the area attributable to adult migration or larval dispersal or both factors taken together, and (ii) patterns of historical gene flow persisting among recently founded large populations.


2009 ◽  
Vol 106 (45) ◽  
pp. 19044-19049 ◽  
Author(s):  
Miguel A. Fortuna ◽  
Rafael G. Albaladejo ◽  
Laura Fernández ◽  
Abelardo Aparicio ◽  
Jordi Bascompte

2013 ◽  
Vol 16 ◽  
pp. 86-93 ◽  
Author(s):  
Eva M. Albert ◽  
Miguel A. Fortuna ◽  
José A. Godoy ◽  
Jordi Bascompte

Sign in / Sign up

Export Citation Format

Share Document