scholarly journals Cell type-resolved human lung lipidome reveals cellular cooperation in lung function

2018 ◽  
Vol 8 (1) ◽  
Author(s):  
Jennifer E. Kyle ◽  
Geremy Clair ◽  
Gautam Bandyopadhyay ◽  
Ravi S. Misra ◽  
Erika M. Zink ◽  
...  
2020 ◽  
Vol 21 (1) ◽  
Author(s):  
Andrew J. Gentles ◽  
Angela Bik-Yu Hui ◽  
Weiguo Feng ◽  
Armon Azizi ◽  
Ramesh V. Nair ◽  
...  

2003 ◽  
Vol 94 (4) ◽  
pp. 1297-1306 ◽  
Author(s):  
Jason H. T. Bates ◽  
Charles G. Irvin

Measuring lung function in mice is essential for establishing the relevance of murine models to human lung disease. However, making such measurements presents particular technical challenges due to the small size of the animal, particularly with regard to the measurement of respiratory flows. In this review, we examine the various methods currently available for assessment of lung function in mice and contrast them in terms of a concept we call the phenotyping uncertainty principle; each method can be considered to lie somewhere along a continuum on which noninvasiveness must be traded off against experimental control and measurement precision. Unrestrained plethysmography in conscious mice represents the extreme of noninvasiveness and is highly convenient but provides respiratory measures that are so tenuously linked to respiratory mechanics that they cannot be considered as meaningful indicators of lung function. At the other extreme, the measurement of input impedance in anesthetized, paralyzed, tracheostomized mice is precise and specific but requires that an animal be studied under conditions far from natural. In between these two extremes lie methods that sacrifice some precision for a reduction in the level of invasiveness, a promising example being the measurement of transfer impedance in conscious, restrained mice. No method is optimal in all regards; therefore, the appropriate technique to use depends on the application.


2018 ◽  
Author(s):  
Phuwanat Sakornsakolpat ◽  
Dmitry Prokopenko ◽  
Maxime Lamontagne ◽  
Nicola F. Reeve ◽  
Anna L. Guyatt ◽  
...  

SummaryChronic obstructive pulmonary disease (COPD) is the leading cause of respiratory mortality worldwide. Genetic risk loci provide novel insights into disease pathogenesis. To broaden COPD genetic risk loci discovery and identify cell type and phenotype associations we performed a genome-wide association study in 35,735 cases and 222,076 controls from the UK Biobank and additional studies from the International COPD Genetics Consortium. We identified 82 loci with P value < 5×10−8; 47 were previously described in association with either COPD or population-based lung function. Of the remaining 35 novel loci, 13 were associated with lung function in 79,055 individuals from the SpiroMeta consortium. Using gene expression and regulation data, we identified enrichment for loci in lung tissue, smooth muscle and alveolar type II cells. We found 9 shared genomic regions between COPD and asthma and 5 between COPD and pulmonary fibrosis. COPD genetic risk loci clustered into groups of quantitative imaging features and comorbidity associations. Our analyses provide further support to the genetic susceptibility and heterogeneity of COPD.


Author(s):  
Jyotshna Mandal ◽  
Michael Roth ◽  
Eleni Papakonstantinou ◽  
Lukas Bubendorf ◽  
Spasenija Savic ◽  
...  

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