scholarly journals High glucose alters the DNA methylation pattern of neurodevelopment associated genes in human neural progenitor cells in vitro

2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Deepika Kandilya ◽  
Sukanya Shyamasundar ◽  
Dhiraj Kumar Singh ◽  
Avijit Banik ◽  
Manoor Prakash Hande ◽  
...  

Abstract Maternal diabetes alters the global epigenetic mechanisms and expression of genes involved in neural tube development in mouse embryos. Since DNA methylation is a critical epigenetic mechanism that regulates gene functions, gene-specific DNA methylation alterations were estimated in human neural progenitor cells (hNPCs) exposed to high glucose (HG) in the present study. The DNA methylation pattern of genes involved in several signalling pathways including axon guidance (SLIT1-ROBO2 pathway), and Hippo pathway (YAP and TAZ) was altered in hNPCs exposed to HG. The expression levels of SLIT1-ROBO2 pathways genes (including its effectors, SRGAP1 and CDC42) which mediates diverse cellular processes such as proliferation, neurogenesis and axon guidance, and Hippo pathway genes (YAP and TAZ) which regulates proliferation, stemness, differentiation and organ size were downregulated in hNPCs exposed to HG. A recent report suggests a possible cross-talk between SLIT1-ROBO2 and TAZ via CDC42, a mediator of actin dynamics. Consistent with this, SLIT1 knockdown downregulated the expression of its effectors and TAZ in hNPCs, suggesting that HG perturbs the cross-talk between SLIT1-ROBO2 and TAZ in hNPCs. Overall, this study demonstrates that HG epigenetically alters the SLIT1-ROBO2 and Hippo signalling pathways in hNPCs, forming the basis for neurodevelopmental disorders in offspring of diabetic pregnancy.

Epigenomics ◽  
2019 ◽  
Vol 11 (10) ◽  
pp. 1143-1161 ◽  
Author(s):  
Deepika Kandilya ◽  
Silambarasan Maskomani ◽  
Sukanya Shyamasundar ◽  
Paul Anantharajah Tambyah ◽  
Chan Shiao Yng ◽  
...  

Aim: This study was aimed to understand if Zika virus (ZIKV) alters the DNA methylome of human neural progenitor cells (hNPCs). Materials & methods: Whole genome DNA methylation profiling was performed using human methylationEPIC array in control and ZIKV infected hNPCs. Results & conclusion: ZIKV infection altered the DNA methylation of several genes such as WWTR1 (TAZ) and RASSF1 of Hippo signaling pathway which regulates organ size during brain development, and decreased the expression of several centrosomal-related microcephaly genes, and genes involved in stemness and differentiation in human neural progenitor cells. Overall, ZIKV downregulated the Hippo signaling pathway genes which perturb the stemness and differentiation process in hNPCs, which could form the basis for ZIKV-induced microcephaly.


IBRO Reports ◽  
2019 ◽  
Vol 6 ◽  
pp. S466
Author(s):  
Thameem Dheen ◽  
Deepika Kandilya ◽  
Sukanya Shyamasundar ◽  
Dhiraj Kumar Singh ◽  
Karthik Mallilankaraman ◽  
...  

PLoS ONE ◽  
2009 ◽  
Vol 4 (10) ◽  
pp. e7630 ◽  
Author(s):  
Dhruv Sareen ◽  
Erin McMillan ◽  
Allison D. Ebert ◽  
Brandon C. Shelley ◽  
Julie A. Johnson ◽  
...  

2016 ◽  
Vol 65 ◽  
pp. 212-223 ◽  
Author(s):  
Hee Yeon Kim ◽  
Susanna H. Wegner ◽  
Kirk P. Van Ness ◽  
Julie Juyoung Park ◽  
Sara E. Pacheco ◽  
...  

2019 ◽  
Vol 12 (1) ◽  
pp. 4-16 ◽  
Author(s):  
Kushani Shah ◽  
Gwendalyn D King ◽  
Hao Jiang

Abstract It remains unknown whether H3K4 methylation, an epigenetic modification associated with gene activation, regulates fate determination of the postnatal neural stem and progenitor cells (NSPCs). By inactivating the Dpy30 subunit of the major H3K4 methyltransferase complexes in specific regions of mouse brain, we demonstrate a crucial role of efficient H3K4 methylation in maintaining both the self-renewal and differentiation capacity of postnatal NSPCs. Dpy30 deficiency disrupts development of hippocampus and especially the dentate gyrus and subventricular zone, the major regions for postnatal NSC activities. Dpy30 is indispensable for sustaining the self-renewal and proliferation of NSPCs in a cell-intrinsic manner and also enables the differentiation of mouse and human neural progenitor cells to neuronal and glial lineages. Dpy30 directly regulates H3K4 methylation and the induction of several genes critical in neurogenesis. These findings link a prominent epigenetic mechanism of gene expression to the fundamental properties of NSPCs and may have implications in neurodevelopmental disorders.


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