scholarly journals Imaging live bacteria at the nanoscale: comparison of immobilisation strategies

The Analyst ◽  
2019 ◽  
Vol 144 (23) ◽  
pp. 6944-6952 ◽  
Author(s):  
Georgina Benn ◽  
Alice L. B. Pyne ◽  
Maxim G. Ryadnov ◽  
Bart W. Hoogenboom

Different sample preparations are compared, to facilitate atomic force microscopy (AFM) of live Gram-negative bacteria. The obtained resolution is sufficient to resolve the proteinaceous network in the outer membrane.

2006 ◽  
Vol 72 (7) ◽  
pp. 4695-4703 ◽  
Author(s):  
H.-L. Alakomi ◽  
A. Paananen ◽  
M.-L. Suihko ◽  
I. M. Helander ◽  
M. Saarela

ABSTRACT Gram-negative bacteria play an important role in the formation and stabilization of biofilm structures on stone surfaces. Therefore, the control of growth of gram-negative bacteria offers a way to diminish biodeterioration of stone materials. The effect of potential permeabilizers on the outer membrane (OM) properties of gram-negative bacteria was investigated and further characterized. In addition, efficacy of the agents in enhancing the activity of a biocide (benzalkonium chloride) was assessed. EDTA, polyethylenimine (PEI), and succimer (meso-2,3-dimercaptosuccinic) were shown to be efficient permeabilizers of the members of Pseudomonas and Stenotrophomonas genera, as indicated by an increase in the uptake of a hydrophobic probe (1-N-phenylnaphthylamine) and sensitization to hydrophobic antibiotics. Visualization of Pseudomonas cells treated with EDTA or PEI by atomic force microscopy revealed damage in the outer membrane structure. PEI especially increased the surface area and bulges of the cells. Topographic images of EDTA-treated cells were compatible with events assigned for the effect of EDTA on outer membranes, i.e., release of lipopolysaccharide and disintegration of OM structure. In addition, the effect of EDTA treatment was visualized in phase-contrast images as large areas with varying hydrophilicity on cell surfaces. In liquid culture tests, EDTA and PEI supplementation enhanced the activity of benzalkonium chloride toward the target strains. Use of permeabilizers in biocide formulations would enable the use of decreased concentrations of the active biocide ingredient, thereby providing environmentally friendlier products.


2019 ◽  
Vol 55 (5) ◽  
pp. 495-505
Author(s):  
T. Theansungnoen ◽  
N. Jangpromma ◽  
P. Anwised ◽  
S. Daduang ◽  
Y. Fukumori ◽  
...  

1999 ◽  
Vol 181 (22) ◽  
pp. 6865-6875 ◽  
Author(s):  
X. Yao ◽  
M. Jericho ◽  
D. Pink ◽  
T. Beveridge

ABSTRACT Atomic force microscopy was used to measure the thickness of air-dried, collapsed murein sacculi from Escherichia coliK-12 and Pseudomonas aeruginosa PAO1. Air-dried sacculi from E. coli had a thickness of 3.0 nm, whereas those fromP. aeruginosa were 1.5 nm thick. When rehydrated, the sacculi of both bacteria swelled to double their anhydrous thickness. Computer simulation of a section of a model single-layer peptidoglycan network in an aqueous solution with a Debye shielding length of 0.3 nm gave a mass distribution full width at half height of 2.4 nm, in essential agreement with these results. When E. colisacculi were suspended over a narrow groove that had been etched into a silicon surface and the tip of the atomic force microscope used to depress and stretch the peptidoglycan, an elastic modulus of 2.5 × 107 N/m2 was determined for hydrated sacculi; they were perfectly elastic, springing back to their original position when the tip was removed. Dried sacculi were more rigid with a modulus of 3 × 108 to 4 × 108N/m2 and at times could be broken by the atomic force microscope tip. Sacculi aligned over the groove with their long axis at right angles to the channel axis were more deformable than those with their long axis parallel to the groove axis, as would be expected if the peptidoglycan strands in the sacculus were oriented at right angles to the long cell axis of this gram-negative rod. Polar caps were not found to be more rigid structures but collapsed to the same thickness as the cylindrical portions of the sacculi. The elasticity of intactE. coli sacculi is such that, if the peptidoglycan strands are aligned in unison, the interstrand spacing should increase by 12% with every 1 atm increase in (turgor) pressure. Assuming an unstressed hydrated interstrand spacing of 1.3 nm (R. E. Burge, A. G. Fowler, and D. A. Reaveley, J. Mol. Biol. 117:927–953, 1977) and an internal turgor pressure of 3 to 5 atm (or 304 to 507 kPa) (A. L. Koch, Adv. Microbial Physiol. 24:301–366, 1983), the natural interstrand spacing in cells would be 1.6 to 2.0 nm. Clearly, if large macromolecules of a diameter greater than these spacings are secreted through this layer, the local ordering of the peptidoglycan must somehow be disrupted.


2000 ◽  
Vol 182 (13) ◽  
pp. 3809-3815 ◽  
Author(s):  
Ilene D. Auerbach ◽  
Cody Sorensen ◽  
Helen G. Hansma ◽  
Patricia A. Holden

Unsaturated biofilms of Pseudomonas putida, i.e., biofilms grown in humid air, were analyzed by atomic force microscopy to determine surface morphology, roughness, and adhesion forces in the outer and basal cell layers of fresh and desiccated biofilms. Desiccated biofilms were equilibrated with a 75.5% relative humidity atmosphere, which is far below the relative humidity of 98 to 99% at which these biofilms were cultured. In sharp contrast to the effects of drying on biofilms grown in fluid, we observed that drying caused little change in morphology, roughness, or adhesion forces in these unsaturated biofilms. Surface roughness for moist and dry biofilms increased approximately linearly with increasing scan sizes. This indicated that the divides between bacteria contributed more to overall roughness than did extracellular polymeric substances (EPS) on individual bacteria. The EPS formed higher-order structures we termed mesostructures. These mesostructures are much larger than the discrete polymers of glycolipids and proteins that have been previously characterized on the outer surface of these gram-negative bacteria.


BioTechniques ◽  
2004 ◽  
Vol 37 (4) ◽  
pp. 564-573 ◽  
Author(s):  
Bradley E. Layton ◽  
AnnMarie Sastry ◽  
Christian M. Lastoskie ◽  
Martin A. Philbert ◽  
Terry J. Miller ◽  
...  

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