scholarly journals Identification of the catalytic nucleophile of the Family 31 α-glucosidase from Aspergillus niger via trapping of a 5-fluoroglycosyl‒enzyme intermediate

2001 ◽  
Vol 359 (2) ◽  
pp. 381 ◽  
Author(s):  
Seung Seo LEE ◽  
Shouming HE ◽  
Stephen G. WITHERS
2001 ◽  
Vol 359 (2) ◽  
pp. 381-386 ◽  
Author(s):  
Seung Seo LEE ◽  
Shouming HE ◽  
Stephen G. WITHERS

The mechanism-based reagent 5-fluoro-α-d-glucopyranosyl fluoride (5FαGlcF) was used to trap a glycosyl–enzyme intermediate and identify the catalytic nucleophile at the active site of Aspergillus niger α-glucosidase (Family 31). Incubation of the enzyme with 5FαGlcF, followed by peptic proteolysis and comparative liquid chromatography/MS mapping allowed the isolation of a labelled peptide. Fragmentation analysis of this peptide by tandem MS yielded the sequence WYDMSE, with the label located on the aspartic acid residue (D). Comparison with the known protein sequence identified the labelled amino acid as Asp-224 of the P2 subunit.


2003 ◽  
Vol 278 (48) ◽  
pp. 47394-47399 ◽  
Author(s):  
Chris A. Tarling ◽  
Shouming He ◽  
Gerlind Sulzenbacher ◽  
Christophe Bignon ◽  
Yves Bourne ◽  
...  

Author(s):  
Ahmed A. Abdulrraziq ◽  
Sami M. Salih ◽  
Sultan F. Alnomasy ◽  
Ziyad M. Aldosari ◽  
Bader S. Alotaibi

Arum cyreniacum is an important member of the family of Araceae because of its bio-activities. Hence this work aimed to establish a link between Arum cyreniacum and its uses as bio-control against plant pathogenic fungi which had never hitherto been established. This work was carried out to evaluate the activity of the aqueous extracts of tubers, leaves, and flowers of Arum cyreniacum against three different types of pathogenic fungi, Fusarium solani, Rhizopus microspores and Aspergillus niger. The antifungal activity of the aqueous extracts of Arum cyreniacum was determined by poisoned food technique. The results showed that Arum cyreniacum had an inhibitory effect in a dose-dependent manner on Fusarium solani, Rhizopus microspores, while Aspergillus niger was resistant to all extracts. However, the great inhibition activity against tested fungi was associated with increasing concentrations of the aqueous extracts of Arum cyreniacum. Data in this work indicated that the use of Arum cyreniacum could be a valid alternative for bio-control of plant pathogenic fungi.


2021 ◽  
Author(s):  
Upul Subasinghe ◽  
R.A.P. Malithi ◽  
S.W. Withanage ◽  
T.H.P.S. Fernando ◽  
D.S. Hettiarachchi

Abstract Agarwood is a dark, fragrant, valuable resinous wood produced in Aquilaria and Gyrinops tree species in the family Thymelaeaceae to protect internal tissues from microbial infections. Aspergillus niger and Fusarium solani are well known to induce agarwood resin formation. This study demonstrated for the first time that agarwood resin formation can be induced by the mycotoxins of A. niger and F. solani. Different volumes of mycotoxins extracted from the ASP-U strain (USJCC-0059) of A. niger and the FUS-U strain (USJCC-0060) of F. solani were inoculated into A. crassna trees at 1 m intervals. The impacts of the inoculations were observed through resin content and constituent analysis at 7 months after inoculation. Resin production due to the mycotoxins of ASP-U and FUS-U was restricted to ±20 cm and ±60 cm, respectively, from the inoculation point. Color of the resinous agarwood varied from yellowish-brown to black. The differences in resin content formation due to the different inoculant volumes of ASP-U and FUS-U were statistically significant, and the average resin contents varied from 0.89%-4.44% and 1.24%-9.20%, respectively. GC-MS analysis detected 27 constituents responsible for the characteristic aroma of agarwood resin. Among them, phenyl butanone, agarofuran, agarospirol, β-caryophyllene, alloaromadendrene oxide and (-)guaiene-1(10),11-diene-15-ol were found in all extracts. These are common in commercially available agarwood induced by fungal species. Hence, we demonstrated that the mycotoxins of specific fungal strains can be used for agarwood production. Therefore, chemically synthesized mycotoxins can be used at commercial-scale, eliminating the difficulties of maintaining live fungal cultures for agarwood production.


1988 ◽  
Vol 62 (03) ◽  
pp. 419-423 ◽  
Author(s):  
Baba Senowbari-Daryan ◽  
George D. Stanley

Two Upper Triassic sphinctozoan sponges of the family Sebargasiidae were recovered from silicified residues collected in Hells Canyon, Oregon. These sponges areAmblysiphonellacf.A. steinmanni(Haas), known from the Tethys region, andColospongia whalenin. sp., an endemic species. The latter sponge was placed in the superfamily Porata by Seilacher (1962). The presence of well-preserved cribrate plates in this sponge, in addition to pores of the chamber walls, is a unique condition never before reported in any porate sphinctozoans. Aporate counterparts known primarily from the Triassic Alps have similar cribrate plates but lack the pores in the chamber walls. The sponges from Hells Canyon are associated with abundant bivalves and corals of marked Tethyan affinities and come from a displaced terrane known as the Wallowa Terrane. It was a tropical island arc, suspected to have paleogeographic relationships with Wrangellia; however, these sponges have not yet been found in any other Cordilleran terrane.


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