scholarly journals Main phase transition in lipid bilayers: Phase coexistence and line tension in a soft, solvent-free, coarse-grained model

2010 ◽  
Vol 132 (15) ◽  
pp. 155104 ◽  
Author(s):  
Martin Hömberg ◽  
Marcus Müller
2011 ◽  
Vol 100 (3) ◽  
pp. 640a
Author(s):  
Tristan Bereau ◽  
Zun-Jing Wang ◽  
Markus Deserno

2015 ◽  
Vol 2015 ◽  
pp. 1-6
Author(s):  
Zareh A. Grigoryan ◽  
Armen T. Karapetian

The mutual influence of the slow rearrangements of secondary structure and fast collapse of the long single-stranded RNA (ssRNA) in approximation of coarse-grained model is studied with analytic calculations. It is assumed that the characteristic time of the secondary structure rearrangement is much longer than that for the formation of the tertiary structure. A nonequilibrium phase transition of the 2nd order has been observed.


2010 ◽  
Vol 114 (27) ◽  
pp. 8926-8933 ◽  
Author(s):  
Heiko M. Seeger ◽  
Alessandro Di Cerbo ◽  
Andrea Alessandrini ◽  
Paolo Facci

2012 ◽  
Vol 116 (5) ◽  
pp. 1551-1569 ◽  
Author(s):  
Jocelyn M. Rodgers ◽  
Jesper Sørensen ◽  
Frédérick J.-M. de Meyer ◽  
Birgit Schiøtt ◽  
Berend Smit

2010 ◽  
Vol 82 (1) ◽  
Author(s):  
Hongyan Yuan ◽  
Changjin Huang ◽  
Ju Li ◽  
George Lykotrafitis ◽  
Sulin Zhang

2021 ◽  
Author(s):  
Simou Sun ◽  
Trevor GrandPre ◽  
David T. Limmer ◽  
Jay T. Groves

AbstractLAT is a membrane-linked scaffold protein that undergoes a phase transition to form a two-dimensional protein condensate on the membrane during T cell activation. Governed by tyrosine phosphorylation, LAT recruits various proteins that ultimately enable condensation through a percolation network of discrete and selective protein-protein interactions. Here we describe detailed kinetic measurements of the phase transition, along with coarse-grained model simulations, that reveal LAT condensation is kinetically frustrated by the availability of bonds to form the network. Unlike typical miscibility transitions in which compact domains may coexist at equilibrium, the LAT condensates are dynamically arrested in extended states, kinetically trapped out of equilibrium. Modeling identifies the structural basis for this kinetic arrest as the formation of spindle arrangements, favored by limited multivalent binding interactions along the flexible, intrinsically disordered LAT protein. These results reveal how local factors controlling the kinetics of LAT condensation enable formation of different, stable condensates, which may ultimately coexist within the cell.


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