The developing relationship between Stylosanthes and anthracnose after 14 years in a North Queensland pasture. 2. Diversity in the pathogen population

1994 ◽  
Vol 34 (5) ◽  
pp. 621 ◽  
Author(s):  
RD Davis ◽  
RM Boland ◽  
CJ Howitt

Broad diversity was indicated in fungal isolates of Colletotrichum gloeosporioides collected from a mixed accession Stylosanthes pasture during 1987-89. Isolate pathogenicity studies revealed 7 different pathogenic groups in 1987, while 16 different groups were separated in the 1989 collection. About 40% of isolates from both years were capable of producing symptoms on only 2 differential host lines while the more complex groups (pathogenic on 3-6 differentials) were proportionately less common. Fungal growth at 4 temperatures revealed significant variation in growth rates although most isolates grew optimally at 28�C. When 3 isolates representing different pathogenic groups were examined in a series of glasshouse inoculum composition studies, all contributed evenly to the number of lesions produced when inoculated together in equal proportions. There was no evidence of domination by the most virulent isolate used in these glasshouse studies and similarly there was no evidence of particular strain dominance in the field. Continual natural diluting of virulent field inoculum by the large diversity of other strains would probably prevent rapid severe epidemics developing in this pasture.


2021 ◽  
Author(s):  
Dalel Daâssi ◽  
Fatimah Qabil Almaghribi

Abstract The aim of this work was to isolate indigenous PAH degrading-fungi from petroleum contaminated soil and exogenous ligninolytic strains from decaying-wood, with the ability to secrete diverse enzyme activity. A total of ten ligninolytic fungal isolates and two native strains, has been successfully isolated, screened and identified. The phylogenetic analysis revealed that the indigenous fungi (KBR1 and KB8) belong to the genus Aspergillus niger and tubingensis. While the ligninolytic exogenous PAH-degrading strains namely KBR1-1, KB4, KB2 and LB3 were affiliated to different genera like Syncephalastrum sp, Paecilomyces formosus, Fusarium chlamydosporum, and Coniochaeta sp., respectively. Basis on the taxonomic analysis, enzymatic activities and the hydrocarbons removal rates, single fungal culture employing the strain LB3, KB4, KBR1 and the mixed culture (LB3+KB4) were selected to be used in soil microcosms treatments. The Total petroleum hydrocarbons (TPH), fungal growth rates, BOD5/COD ratios and GC-MS analysis, were determined in all soil microcosmos treatments (SMT) and compared with those of the control (SMU). After 60 days of culture incubation, the highest rate of TPH degradation was recorded in SMT[KB4] by approximately 92±2.35% followed by SMT[KBR1] then SMT[LB3+KB4] with 86.66±1.83% and 85.14±2.21%, respectively.



2009 ◽  
Vol 72 (2) ◽  
pp. 375-383 ◽  
Author(s):  
KATJA HINDERINK ◽  
MIIA LINDSTRÖM ◽  
HANNU KORKEALA

The minimum and maximum growth temperatures of 23 group I Clostridium botulinum strains of the toxin types A, AB, B, and F were determined. Moreover, the maximum growth rates at 20, 37, and 42°C of the same strains were recorded. The minimum growth temperatures varied from 12.8 to 16.5°C, whereas the maximum growth temperatures showed even wider variation, from 40.9 to 48.0°C. At 20 and 37°C, a twofold difference in maximum growth rates between the slowest and the fastest growing strains was found; at 42°C the difference was more than 30-fold. As expected, all strains grew significantly slower at 20°C than at 37°C. However, eight type B strains grew substantially faster at 42°C than they did at 37°C. These findings indicate that the optimum growth temperature for some group I C. botulinum type B strains is higher than the temperature of 37°C that is generally accepted. A significant correlation between maximum growth rates at 42°C and maximum growth temperatures was found for type B and F strains, whereas for type A strains no such correlation could be found. Strain variation was particularly high for the type B strains, reflecting the wide genetic diversity of this toxin type. The significant variation between strains of group I C. botulinum may have an impact on inoculation studies and predictive modeling when assessing the safety of foods.



Agriculture ◽  
2020 ◽  
Vol 10 (8) ◽  
pp. 325
Author(s):  
Luis Fernando Zepeda-Giraud ◽  
Dario Rafael Olicón-Hernández ◽  
Juan Pablo Pardo ◽  
Minerva Georgina Araiza Villanueva ◽  
Guadalupe Guerra-Sánchez

An alternative to chemical fungicides in post-harvest diseases are the use of biocontrol agents and their extracellular products against phytopathogens. Two relevant agents in post-harvest infections are Thielaviopsis paradoxa and Colletotrichum gloeosporioides, causing large economic losses in cacao, pineapple, and avocado during storage. In this work, we evaluated the effect of Wickerhamomyces anomalus, an effective biocontrol agent, against these filamentous fungi, focusing on the production of extracellular enzymes and their effect on fungal growth and germination. Moreover, we evaluated the use of inactivated fungal biomass as an inducer in complete (Potato Dextrose Agar and Yeast Peptone Dextrose) and minimal culture media. The antagonistic effect of W anomalus on the growth of both phytopathogens was also studied. The extracellular enzymes in YPD cultures, using T. paradoxa inactivated biomass as the best inducer, were capable of inhibiting the germination of both phytopathogens. In minimal media, only the production of a 30 kDa glucanase with activity against laminarin was observed. The enzyme was effective against the spore germination of T. paradoxa. In post-harvest crop protection tests, growth inhibition of T. paradoxa was observed using the cell-free enzyme extract, which is a promising system to protect cocoa fruits from T. paradoxa during post-harvest.



1995 ◽  
Vol 73 (S1) ◽  
pp. 1361-1369 ◽  
Author(s):  
Keller Suberkropp

In streams, aquatic hyphomycetes degrade leaf litter and transform it into a more suitable resource for invertebrate detritivores. Previous studies have demonstrated that fungi comprise a major portion of the microbial biomass associated with decomposing leaves and that inputs of leaves in the autumn reduce the concentration of soluble phosphorus in the water. These observations indicate that fungi obtain inorganic nutrients from the water passing over leaf surfaces. However, very little is known concerning the effects of nutrients on the activity of the fungi growing within leaves. To examine this question, I determined fungal biomass (from ergosterol concentrations) and sporulation rates during the breakdown of yellow poplar (Liriodendron tulipifera) leaves in three streams that differed in water chemistry. I also estimated instantaneous growth rates by measuring rates of [14C]acetate incorporation into ergosterol and calculated fungal productivity from growth rates and biomass. Growth rates and productivity determined by this method showed good agreement with values calculated from changes in fungal biomass during early stages of leaf breakdown for two of the streams examined. Highest concentrations of fungal biomass and greatest fungal activity occurred in the stream with the highest concentrations of nutrients. However, differences in total fungal production and biomass were not as great as were differences among sporulation rates in the three streams suggesting that fungal allocation of resources to growth and reproduction can vary depending on nutrient availability. Key words: aquatic hyphomycetes, ergosterol, leaf breakdown, nutrients, fungal productivity, streams.



Plant Disease ◽  
2020 ◽  
Author(s):  
Fei Liu ◽  
Zhongwei Zou ◽  
Gary Peng ◽  
W. G. Dilantha Fernando

Blackleg, caused by Leptosphaeria maculans, is a major disease of canola in Canada, Australia, and Europe. For effective deployment of resistant varieties and disease management, it is crucial to understand the population structure of L. maculans. In this study, we analyze L. maculans isolates from commercial fields in western Canada from 2014 to 2016 for the presence and frequency of avirulence (Avr) genes. A total of 1, 584 isolates was examined for the presence of Avr genes AvrLm1, AvrLm2, AvrLm3, AvrLm4, AvrLm6, AvrLm7, AvrLm9, AvrLepR1, AvrLepR2, and AvrLmS using a set of differential host genotypes carrying known resistance genes and a PCR assay. Several Avr genes showed a higher frequency in the pathogen population, such as AvrLm6 and AvrLm7, which were present in >90% of isolates; while AvrLm3, AvrLm9 and AvrLepR2 showed frequencies of <10%. A total of 189 races (different combinations of Avr genes) were detected, with Avr-2-4-6-7-S, Avr-1-4-6-7 and Avr-2-4-6-7 as the three predominant races. When the effect of crop rotation was assessed, only a three-year rotation showed a significantly higher frequency of AvrLm2, relative to shorter rotations. This study provides the information for producers to select effective canola varieties for blackleg management, and for breeders to deploy new R genes in disease resistance breeding in the western Canada region.



2004 ◽  
Vol 23 (1) ◽  
pp. 15-19 ◽  
Author(s):  
S Pepeljnjak ◽  
Z Slobodnjak ◽  
M Šegvić ◽  
M Peraica ◽  
M Pavlović

This study included 11 adult patients (seven men and four women) who had been surgically treated for pulmonary aspergilloma in the Republic of Croatia within two years. Mycological analysis was positive for Aspergillus genus in five samples of surgically removed tissue. A. fumigatus was isolated in three and A. versicolor in two samples. Their mycotoxigenic potency was determined by thin layer chromatography. A. fumigatusstrains were found to produce aflatoxin B1 (AFB), and two of them aflatoxin G1. A. versicolor strains produced AFB1 and sterigmatocystin. Neither isolated Aspergillus strain produced aflatoxin G2 or ochratoxin A. Fungal growth and production of mycotoxins are the consequences of interaction of fungus, host and environment. One has also to take into consideration that the production of mycotoxins in vitro does not reflect what these fungi may produce in human organisms.



2017 ◽  
Vol 1 ◽  
pp. 08
Author(s):  
Iqra Shahzadi ◽  
Aqeel Ahmad ◽  
Nasim Ahmad Yasin ◽  
Ghulam Fareed ◽  
Yaseen Ashraf ◽  
...  

Timely reporting new pathogens in an area is very important to design crop cultivation strategies. Current study describes the attack of Alternaria brassicicola over garlic, an important food and medicinal plant in Punjab, Pakistan. Pathogen was successfully isolated over artificial fungal growth medium and its microscopic characteristics were studied morphologically. Its identification was confirmed by targeting ribosomal DNA (ribotyping) prior to its submission in Fungal Culture Bank of Pakistan (FCBP). The isolated pathogen was tested for its pathogenicity under greenhouse conditions. Furthermore, the phylogenetic homology of the pathogen was checked with previously reported fungal isolates. The study was preceded according to the design and requirements of Koch’s postulates; and the pathogenicity of the isolated fungal species was confirmed.



2014 ◽  
Vol 14 (1) ◽  
pp. 16-24
Author(s):  
Nurbailis Nurbailis ◽  
Martinius Martinius ◽  
Verry Azniza

ABSTRACTFungal diversity of chili rhizosphere at conventional and organic cropping system and its role as biocontrol agent of Colletotrichum gloeosporioides. The aim of this research was  to study fungal diversity in chili rhizosphere at conventional and organic system; to ditermine and identify the fungi that had antagonistic activity against C. gloeosporioides. Diversities of rhizosphere fungi in chili of conventional and organic system were determined by counting the amount of propagule and isolates. Antagonistic activity was examined by dual cultures and slide culture. Identification was determind up to genus level.  Propagule density and the amount of isolates in chili rhizosphere of organic system were higher than those in conventional system. Fifty two fungal isolates were found from chili rhizosphere at conventional and organic system, 28 isolates from organic system and 24 isolates  from conventional.  Ten fungal isolates from chili rhizosphere in organic system and 4 fungal isolates from that in  conventional system had antagonistic activity against C. gloeosporioides which cause antracnose on chili. The antagonistic isolates were: Trichoderma, Paecilomyces, Aspergillus and unidentified isolate (X isolate).



2001 ◽  
Vol 19 (1) ◽  
pp. 51-55 ◽  
Author(s):  
J. A. LaMondia

Abstract Fungicidal management of anthracnose leaf spot of euonymus (Euonymus fortunei ‘Emerald 'n Gold’ or ‘Emerald Gaiety’), caused by Colletotrichum gloeosporioides, was examined. Fungicide resistance was present in the pathogen population. Weekly applications to foliage for 12 weeks to the same plants in 1997 and 1998 of: thiophanate-methyl alone; or thiophanate-methyl, chlorothalonil, ethylenebis-dithiocarbamate and copper applied sequentially; or mixtures of thiophanate-methyl plus chlorothalonil alternated weekly with thiophanate-methyl plus ethylene-bis-dithiocarbamate were applied. Applications of the same treatments, azoxystrobin, or each of the above fungicides alone were applied at biweekly intervals in 1999. Unsprayed plants served as controls. Percent defoliation was lowest for fungicide mixtures (thiophanate-methyl plus chlorothalonil alternated with thiophanate-methyl plus ethylene-bis-dithiocarbamate) and was highest for unsprayed controls and plants treated with thiophanate-methyl alone. The average number of lesions per 100 leaves was lower for mixed and sequential fungicide programs than for untreated or thiophanate-methyl alone spray programs. Emerald 'n Gold had more lesions per leaf than Emerald Gaiety, but the level of defoliation was greater for Emerald Gaiety. Fungicide-resistant C. gloeosporioides isolates, which were recovered on media amended with thiophanate-methyl or with chlorothalonil, were in lowest frequency from plants treated with the mixed fungicide program. Management of euonymus anthracnose and fungicide resistance in C. gloeosporioides may be achieved by applying fungicide mixtures with different modes of action.



Author(s):  
Mirko Ivanovic ◽  
Bojan Duduk ◽  
Milan Ivanovic ◽  
Miroslav Ivanovic

Anthracnose is a destructive disease of strawberry fruits in warm and continental climate. During 2004, in the vicinity of Valjevo, there were severe losses in two strawberry plantations due to fruit anthracnose. Two fungal isolates, GG-6A and GG-JUP were recovered from strawberry stolons and fruits showing severe anthracnose symptoms. Based on morphological and pathological characteristics, and PCR analyses with specific primers of reference species, isolate GG-6A was identified as Colletotrichum gloeosporioides, and GG-JUP isolate as C. acutatum. This is the first identification of C. acutatum in strawberry in Serbia. In order to control strawberry anthracnose, five fungicides and their combinations were applied four times during the flowering. The best fruit protection was achieved by fungicides Metiram + piraclostrobin (Cabrio top), Captan FL and Fludioksinil + ciprodinil (Swich). Less effective were Benomil (Benlate) and Krezoksim-metil (Stroby). Pathogen is transmitted by planting material, so phytosanitary measures are extremely important in preventing the disease.



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