Assessing the suitability of various screening methods as a proxy for drought tolerance in barley

2017 ◽  
Vol 44 (2) ◽  
pp. 253 ◽  
Author(s):  
Md. Hasanuzzaman ◽  
Lana Shabala ◽  
Tim J. Brodribb ◽  
Meixue Zhou ◽  
Sergey Shabala
Keyword(s):  
Chlorophyll Fluorescence ◽  
Drought Tolerance ◽  
Water Content ◽  
Large Scale ◽  
Stomatal Density ◽  
Rapid Screening ◽  
Screening Methods ◽  
Water Stress Tolerance ◽  
Dry Biomass ◽  
Relative Root

Plant breeders are in the need for a convenient, reproducible, reliable and rapid screening methods to be used as a proxy for drought tolerance for a large number of genotypes. Addressing this need, we compared different physiological measures of stress in six barley (Hordeum vulgare L.) genotypes subjected to different drought treatments under glasshouse conditions. Genotypes were evaluated by measuring transpiration rate, quantum yield of PSII (chlorophyll fluorescence Fv/Fm ratio), SPAD chlorophyll meter reading, dry biomass and shoot water content. The accuracy of different methods for quantifying water stress tolerance was evaluated by measuring the rates of surviving and death in plants and leaves, and newly grown leaves after rewatering. In another experiment, the same genotypes were evaluated by applying 18% (w/v) of polyethylene glycol (PEG) to germinating seeds grown in paper rolls to induce osmotic stress, using relative root and shoot lengths as a measure of tolerance. The results suggest that transpiration measurements at the recovery stage could be the most sensitive method for separating contrasting genotypes. However, the method is time-consuming and laborious for large-scale screening. Chlorophyll content, dry biomass, shoot water content and stomatal density did not correlate with plant drought tolerance. At the same time, chlorophyll fluorescence Fv/Fm ratio showed a strong correlation with drought tolerance and could be recommended as suitable proxy for screening. Measuring relative root growth rate (length) using PEG-treated paper roll-grown seedlings also seems to be a highly suitable and promising method for screening a large number of genotypes in breeding programs.

scholarly journals Some special features of the water regime and the photosynthetic apparatus activity in Feijoa sellowiana (O. Berg) O. Berg plants under the water stress

2021 ◽  
Vol 38 ◽  
pp. 00117
Author(s):  
Elena Shishkina ◽  
Tatiyna Gubanova ◽  
Valerii Titov
Keyword(s):  
Chlorophyll Fluorescence ◽  
Water Stress ◽  
Drought Tolerance ◽  
Water Content ◽  
Water Regime ◽  
Fluorescence Induction ◽  
Chlorophyll Fluorescence Induction ◽  
Ps Ii ◽  
Water Stress Tolerance ◽  
Leaf Tissues

When assessing the drought tolerance of Feijoa sellowiana cultivars and forms, the total water content in leaf tissues and their waterretaining and regenerative capacity were determined, and the parameters of chlorophyll fluorescence induction were measured at different water content in leaves. Current-year leaves were characterized by a higher sensitivity to drought. According to the complex of water regime parameters and characteristics of the chlorophyll fluorescence induction (CFI), it was found that the cultivar Aromatnaya Fantazia and the form 3/1 are characterized by a relatively high drought tolerance. It has been demonstrated that the common method for assessing plant tolerance by the index of their water-retaining forces, in relation to Feijoa sellowiana genotypes, does not allow determining the critical level of water deficit. It has been found that in the cultivars and forms with low water stress tolerance, with the water loss of 20-25% from the leaf tissues complete hydration, irreversible irregularities in the PS II structures occurred. The most sensitive to the lack of water in the leaves were such parameters as variable fluorescence, rate constants of the photochemical and non-photochemical deactivation of the excitation, as well as the processes of Qa reduction in the reaction centers of PS II.

scholarly journals Ochratoxin A Occurrence in Food

2010 ◽  
Vol 67 (2) ◽  
Author(s):  
Dana FEIER ◽  
Maria TOFANA
Keyword(s):  
Ochratoxin A ◽  
Large Scale ◽  
Poultry Meat ◽  
Screening Tests ◽  
Rapid Screening ◽  
Screening Methods ◽  
Ionization Mass ◽  
Promising Alternative ◽  
Analytical Technique ◽  
Analytical Approaches

The aim of the present study was to investigate the occurrence of Ochratoxin A (OA) in food based on the results of the investigation about the Assessment of dietary intake of Ochratoxin A by the population of EU Member States. Ochratoxin A (OTA) can occur in a large variety of commodities (cereals, beans, groundnuts, spices, dried fruits, coffee, beer, wine) and, because of a carry-over effect, in milk, pig blood, liver, and kidney, and poultry meat from animals fed with contaminated feed. Because of the persistence of OTA in the food chain, exposure to the compound is a potential human health hazard. This has prompted adoption of regulatory limits in several countries which, in turn, implies the development of suitable validated and official analytical methods and rapid screening tests for cost-effective food control on a large scale. Liquid chromatography with fluorescence detection (LC–FLD), coupled with immunoaffinity column (IAC) clean-up, is the most widely employed analytical technique. LC coupled with electrospray-ionization mass spectrometry (MS) has detection limits comparable with those of LC– FLD and the selectivity of IAC can be achieved by tandem (MS–MS) or sequential (MSn) detection. Synthetic counterparts to natural antibodies in the form of molecularly imprinted polymers seem a promising alternative to IAC for sample preparation. New analytical approaches to rapid, low-cost screening methods, for example those based on biosensors and dip-stick-like kits, are a direction in which innovation can be expected.

Rapid Screening Methods for Bleeding Disorders. A Three Year Survey

1964 ◽  
Vol 11 (02) ◽  
pp. 506-512 ◽  
Author(s):  
V. A Lovric ◽  
J Margolis
Keyword(s):  
Laboratory Tests ◽  
Capillary Blood ◽  
Screening Tests ◽  
Rapid Screening ◽  
Screening Methods ◽  
Bleeding Disorders ◽  
Routine Laboratory ◽  
Clotting Time ◽  
Kaolin Clotting Time ◽  
In Infants And Children

SummaryAn adaptation of “kaolin clotting time” and prothrombin time for use on haemolysed capillary blood provided simple and sensitive screening tests suitable for use in infants and children. A survey of three year’s experience shows that these are reliable routine laboratory tests for detection of latent coagulation disorders.

Adsorption Isotherm Predictions for Multiple Molecules in MOFs Using the Same Deep Learning Model

2019 ◽  
Author(s):  
Ryther Anderson ◽  
Achay Biong ◽  
Diego Gómez-Gualdrón
Keyword(s):  
Neural Network ◽  
Machine Learning ◽  
Molecular Simulation ◽  
Large Scale ◽  
Learning Model ◽  
Operating Conditions ◽  
Small Subset ◽  
Screening Methods ◽  
Large Set ◽  
Metal Organic

<div>Tailoring the structure and chemistry of metal-organic frameworks (MOFs) enables the manipulation of their adsorption properties to suit specific energy and environmental applications. As there are millions of possible MOFs (with tens of thousands already synthesized), molecular simulation, such as grand canonical Monte Carlo (GCMC), has frequently been used to rapidly evaluate the adsorption performance of a large set of MOFs. This allows subsequent experiments to focus only on a small subset of the most promising MOFs. In many instances, however, even molecular simulation becomes prohibitively time consuming, underscoring the need for alternative screening methods, such as machine learning, to precede molecular simulation efforts. In this study, as a proof of concept, we trained a neural network as the first example of a machine learning model capable of predicting full adsorption isotherms of different molecules not included in the training of the model. To achieve this, we trained our neural network only on alchemical species, represented only by their geometry and force field parameters, and used this neural network to predict the loadings of real adsorbates. We focused on predicting room temperature adsorption of small (one- and two-atom) molecules relevant to chemical separations. Namely, argon, krypton, xenon, methane, ethane, and nitrogen. However, we also observed surprisingly promising predictions for more complex molecules, whose properties are outside the range spanned by the alchemical adsorbates. Prediction accuracies suitable for large-scale screening were achieved using simple MOF (e.g. geometric properties and chemical moieties), and adsorbate (e.g. forcefield parameters and geometry) descriptors. Our results illustrate a new philosophy of training that opens the path towards development of machine learning models that can predict the adsorption loading of any new adsorbate at any new operating conditions in any new MOF.</div>

Sites of Herbicidal Action on Photosynthesis: A Fluorescence Assay Study

Weed Science ◽  
1981 ◽  
Vol 29 (4) ◽  
pp. 371-375 ◽  
Author(s):  
H. Böhme ◽  
K. J. Kunert ◽  
P. Böger
Keyword(s):  
Chlorophyll Fluorescence ◽  
Membrane Lipids ◽  
Diphenyl Ether ◽  
Algal Growth ◽  
Fluorescence Induction ◽  
Rapid Screening ◽  
Diphenyl Ethers ◽  
Total Fluorescence ◽  
Transport Inhibitors ◽  
Weak Electron

The effect of the bleaching and non-bleaching phenylpyridazinones, norflurazon [4-chloro-5-(methylamino)-2-(α,α,α-trifluoro-m-tolyl)-3(2H)-pyridazinone] and BAS 29095 [4,5-dimethoxy-2-phenyl-3(2H)-pyridazinone], on chlorophyll fluorescence of the green alga,Scenedesmus acutus, was investigated and compared to other bleaching herbicides, difunon3[EMD-IT 5914, 5(dimethylamino-methylene)-2-oxo-4-phenyl-2,5-dihydrofuranecarbonitrile-(3)] and the diphenyl ether, oxyfluorfen [2-chloro-1-(3-ethoxy-4-nitrophenoxy)-4-(trifluoromethyl)benzene]. Following chlorophyll fluorescence during short-term cultivation in the presence of herbicides and comparing it to physiological parameters such as chlorophyll content and packed cell volume allowed for rapid screening to detect different primary herbicidal modes of action. Two primary bleaching effects caused by either inhibition of carotene biosynthesis (certain substituted pyridazinones and difunon) or peroxidative degradation of membrane lipids (certain diphenyl ethers) led to completely different fluorescence signals. Growth of algae in the presence of a carotene biosynthesis inhibitor resulted in a rapid rise to maximum fluorescence, followed by a single decay phase, whereas bleaching diphenyl ethers led to a rapid loss of total fluorescence. Non-bleaching phenylpyridazinones, which act as weak electron transport inhibitors, inhibited variable fluorescence. Detoxication during algal growth became evident by recovery of the fluorescence induction.

scholarly journals Spatial variation and mechanisms of leaf water content in grassland plants at the biome scale: evidence from three comparative transects

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Ruomeng Wang ◽  
Nianpeng He ◽  
Shenggong Li ◽  
Li Xu ◽  
Mingxu Li
Keyword(s):  
Spatial Variation ◽  
Water Content ◽  
Large Scale ◽  
Life Forms ◽  
Important Variable ◽  
Leaf Water ◽  
Leaf Water Content ◽  
Desert Grassland ◽  
Large Spatial Scale ◽  
Grassland Plants

AbstractLeaf water content (LWC) has important physiological and ecological significance for plant growth. However, it is still unclear how LWC varies over large spatial scale and with plant adaptation strategies. Here, we measured the LWC of 1365 grassland plants, along three comparative precipitation transects from meadow to desert on the Mongolia Plateau (MP), Loess Plateau, and Tibetan Plateau, respectively, to explore its spatial variation and the underlying mechanisms that determine this variation. The LWC data were normally distributed with an average value of 0.66 g g−1. LWC was not significantly different among the three plateaus, but it differed significantly among different plant life forms. Spatially, LWC in the three plateaus all decreased and then increased from meadow to desert grassland along a precipitation gradient. Unexpectedly, climate and genetic evolution only explained a small proportion of the spatial variation of LWC in all plateaus, and LWC was only weakly correlated with precipitation in the water-limited MP. Overall, the lasso variation in LWC with precipitation in all plateaus represented an underlying trade-off between structural investment and water income in plants, for better survival in various environments. In brief, plants should invest less to thrive in a humid environment (meadow), increase more investment to keep a relatively stable LWC in a drying environment, and have high investment to hold higher LWC in a dry environment (desert). Combined, these results indicate that LWC should be an important variable in future studies of large-scale trait variations.

The effect of water deficit on some physiological indices of Indian lettuce (Lactuca indica L.)

2021 ◽  
Vol 66 (1) ◽  
pp. 80-86
Author(s):  
Thin Pham Thi Thanh ◽  
Bang Cao Phi ◽  
Hai Nguyen Thi Thanh ◽  
Khuynh Bui The ◽  
Mai Nguyen Phuong ◽  
...  
Keyword(s):  
Chlorophyll Fluorescence ◽  
Water Stress ◽  
Water Content ◽  
Flowering Time ◽  
Water Deficit ◽  
Physiological Responses ◽  
Water Deficit Stress ◽  
Flower Formation ◽  
Lactuca Indica ◽  
Wilting Rate

Indian Lettuce (Lactuca indica L.) is a valuable medicinal herb but there are still no many researches about this plant. In this work, the physiological responses of Indian lettuce plants under water deficit conditions (5, 8, and 11 days of water stress) were investigated. The Indian lettuce wilted after 5 days of water stress (66.66%), the wilting rate increased after 8 (93.33%) and 11 days (100%) of water stress. The longer duration of water deficit stress caused the slower recovery of plants after rewatering. The water deficit stress caused a decrease in chlorophyll fluorescence, non-associated water content as well as flower formation of Indian lettuce. But the water deficit stress increases the associated water content and the flowering time of this plant.

scholarly journals Ploidy levels in Citrus clementine affects leaf morphology, stomatal density and water content

2013 ◽  
Vol 25 (4) ◽  
pp. 283-290 ◽  
Author(s):  
Diego Padoan ◽  
Amr Mossad ◽  
Benedetta Chiancone ◽  
Maria Antonietta Germana ◽  
Patan Shaik Sha Valli Khan
Keyword(s):  
Water Content ◽  
Leaf Morphology ◽  
Stomatal Density ◽  
Ploidy Levels

scholarly journals DEHYDRIN PROFILES OF SOME IRANIAN MELON VARIETIES (Cucumis melo L. Merr) UNDER DROUGHT STRE SS CONDITIONS

2019 ◽  
Vol 18 (6) ◽  
pp. 75-84
Author(s):  
Alireza Motallebi-Azar ◽  
István Papp ◽  
Anita Szegő
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Water Content ◽  
Water Status ◽  
Field Capacity ◽  
Total Protein Content ◽  
Severe Drought ◽  
Molecular Weights ◽  
Potential Marker ◽  
Relative Water

Dehydrins are proteins that play a role in the mechanism of drought tolerance. This study aimed at establishing dehydrin profile and accumulation in four local melon varieties of Iran: Mino, Dargazi, Saveii, and Semsori, as well as in a commercial variety Honeydew. Plants were treated with drought stress by adjusting the soil water content to 75, 50, 40, 30 and 20% of field capacity (FC) by withholding water. Water status of plants was monitored based on the seedling fresh weight (FW) and relative water content of leaves (RWC). Total protein content was extracted, then heat-stable protein (HSP) fraction was isolated for each variety and water stress treatment. After SDS-PAGE of HSP, Western blotting analysis was carried out with Anti-dehydrin rabbit (primary) and Goat anti rabbit (secondary) antibodies. ANOVA results showed that with decreasing FC below 75%, FW and RWC decreased, but these changes significantly varied among genotypes. On the basis of FW and RWC data under different drought stress treatments, the following drought-tolerant ranking was established: Mino > Dargazi > Saveii and Honeydew > Semsori, from tolerant to sensitive order. Results of Western blot analysis showed that expression of some proteins with molecular weights of 19–52 kDa was induced in the studied varieties under drought stress (% FC). Expression level of the dehydrin proteins in different varieties was variable and also depending on the drought stress level applied. However, dehydrin proteins (45 and 50 kDa) showed strong expression levels in all varieties under severe drought stress (20% FC). The abundance of dehydrin proteins was higher in tolerant varieties (Mino and Dargazi) than in moderate and drought sensitive genotypes. Consequently, dehydrins represent a potential marker for selection of genotypes with enhanced drought tolerance.

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