scholarly journals Occlusion of anion-binding exosite 2 in meizothrombin explains its impaired ability to activate factor V

2018 ◽  
Vol 294 (7) ◽  
pp. 2422-2435
Author(s):  
Harlan N. Bradford ◽  
Sriram Krishnaswamy
1989 ◽  
Vol 257 (1) ◽  
pp. 143-150 ◽  
Author(s):  
F A Ofosu ◽  
J Hirsh ◽  
C T Esmon ◽  
G J Modi ◽  
L M Smith ◽  
...  

We have proposed previously that the steps in coagulation most sensitive to inhibition by heparin are the thrombin-dependent amplification reactions, and that prothrombinase is formed in heparinized plasma only after Factor Xa activates Factor VIII and Factor V. These propositions were based on the demonstration that both heparin and Phe-Pro-Arg-CH2Cl completely inhibited 125I-prothrombin activation for up to 60 s when contact-activated plasma (CAP) was replenished with Ca2+. Furthermore, the addition of thrombin to CAP before heparin or Phe-Pro-Arg-CH2Cl completely reversed their inhibitory effects. Additional support for the above hypotheses is provided in this study by demonstrating that, when the activity of thrombin is suppressed by heparin (indirectly) or by Phe-Pro-Arg-CH2Cl (directly), exogenous Factor Xa reverses the ability of these two agents to inhibit prothrombin activation. Prothrombin activation was initiated by adding Factor Xa (1 nM) or thrombin (1 or 10 nM) simultaneously with CaCl2 to CAP. In the absence of heparin or Phe-Pro-Arg-CH2Cl, prothrombin activation was seen 15 s later in either case. Heparin failed to delay, and Phe-Pro-Arg-CH2Cl delayed for 15 s, prothrombin activation in CAP supplemented with Factor Xa. In contrast, heparin and Phe-Pro-Arg-CH2Cl completely inhibited prothrombin activation for at least 45 s in CAP supplemented with 1 nM-thrombin. Heparin failed to delay prothrombin activation in CAP supplemented with 10 nM-thrombin, whereas Phe-Pro-Arg-CH2Cl completely inhibited prothrombin activation in this plasma for 45 s. These results suggest that in CAP: (1) Factor Xa can effectively activate Factor VIII and Factor V when the proteolytic activity of thrombin is suppressed; (2) heparin-antithrombin III is less able to inhibit Factor Xa than thrombin; (3) suppression of the thrombin-dependent amplification reactions is the primary anticoagulant effect of heparin.


2006 ◽  
Vol 281 (27) ◽  
pp. 18569-18580 ◽  
Author(s):  
Michael A. Bukys ◽  
Tivadar Orban ◽  
Paul Y. Kim ◽  
Daniel O. Beck ◽  
Michael E. Nesheim ◽  
...  

2015 ◽  
Vol 291 (4) ◽  
pp. 1565-1581 ◽  
Author(s):  
Joesph R. Wiencek ◽  
Jamila Hirbawi ◽  
Vivien C. Yee ◽  
Michael Kalafatis

Prothrombin (FII) is activated to α-thrombin (IIa) by prothrombinase. Prothrombinase is composed of a catalytic subunit, factor Xa (fXa), and a regulatory subunit, factor Va (fVa), assembled on a membrane surface in the presence of divalent metal ions. We constructed, expressed, and purified several mutated recombinant FII (rFII) molecules within the previously determined fVa-dependent binding site for fXa (amino acid region 473–487 of FII). rFII molecules bearing overlapping deletions within this significant region first established the minimal stretch of amino acids required for the fVa-dependent recognition exosite for fXa in prothrombinase within the amino acid sequence Ser478–Val479–Leu480–Gln481–Val482. Single, double, and triple point mutations within this stretch of rFII allowed for the identification of Leu480 and Gln481 as the two essential amino acids responsible for the enhanced activation of FII by prothrombinase. Unanticipated results demonstrated that although recombinant wild type α-thrombin and rIIaS478A were able to induce clotting and activate factor V and factor VIII with rates similar to the plasma-derived molecule, rIIaSLQ→AAA with mutations S478A/L480A/Q481A was deficient in clotting activity and unable to efficiently activate the pro-cofactors. This molecule was also impaired in protein C activation. Similar results were obtained with rIIaΔSLQ (where rIIaΔSLQ is recombinant human α-thrombin with amino acids Ser478/Leu480/Gln481 deleted). These data provide new evidence demonstrating that amino acid sequence Leu480–Gln481: 1) is crucial for proper recognition of the fVa-dependent site(s) for fXa within prothrombinase on FII, required for efficient initial cleavage of FII at Arg320; and 2) is compulsory for appropriate tethering of fV, fVIII, and protein C required for their timely activation by IIa.


Blood ◽  
2011 ◽  
Vol 118 (2) ◽  
pp. 437-445 ◽  
Author(s):  
Anton Matafonov ◽  
Suryakala Sarilla ◽  
Mao-fu Sun ◽  
John P. Sheehan ◽  
Vladimir Serebrov ◽  
...  

AbstractThe prothrombinase complex converts prothrombin to α-thrombin through the intermediate meizothrombin (Mz-IIa). Both α-thrombin and Mz-IIa catalyze factor (F) XI activation to FXIa, which sustains α-thrombin production through activation of FIX. The interaction with FXI is thought to involve thrombin anion binding exosite (ABE) I. α-Thrombin can undergo additional proteolysis to β-thrombin and γ-thrombin, neither of which have an intact ABE I. In a purified protein system, FXI is activated by β-thrombin or γ-thrombin, and by α-thrombin in the presence of the ABE I-blocking peptide hirugen, indicating that a fully formed ABE I is not absolutely required for FXI activation. In a FXI-dependent plasma thrombin generation assay, β-thrombin, γ-thrombin, and α-thrombins with mutations in ABE I are approximately 2-fold more potent initiators of thrombin generation than α-thrombin or Mz-IIa, possibly because fibrinogen, which binds to ABE I, competes poorly with FXI for forms of thrombin lacking ABE I. In addition, FXIa can activate factor FXII, which could contribute to thrombin generation through FXIIa-mediated FXI activation. The data indicate that forms of thrombin other than α-thrombin contribute directly to feedback activation of FXI in plasma and suggest that FXIa may provide a link between tissue factor-initiated coagulation and the proteases of the contact system.


Blood ◽  
2010 ◽  
Vol 116 (21) ◽  
pp. 2219-2219
Author(s):  
Roisin Walshe ◽  
Mettine H.A. Bos ◽  
Rodney M. Camire

Abstract Abstract 2219 Blood coagulation factor V (FV) is a multi-domain protein (A1-A2-B-A3-C1-C2) with little or no procoagulant activity and circulates in blood as a procofactor. Recent data indicate that specific sequences within the B-domain (963-1008) play a predominant role in keeping FV inactive. Removing these sequences via deletion or mutagenesis drives the activation of FV. In normal physiological situations, proteolytic processing of FV by thrombin within the B-domain (710-1545) ultimately removes these inhibitory sequences. Thrombin cleaves FV at three sites in a kinetically preferred order at Arg709, Arg1018 followed by Arg1545 to ultimately generate the active cofactor species, FVa consisting of a heavy and light chain. The need for three thrombin cleavage sites to generate an active cofactor species is not entirely obvious considering that RVV-V, a snake venom protease, activates FV following a single cleavage at Arg1545. Here we uncover new structure/function insights into how specific B-domain sequences restrict thrombin recognition of FV thereby forcing the need for three cleavage sites. To investigate this, we generated a panel of recombinant FV derivatives in BHK cells with different regions of the B-domain eliminated and combined functional measurements with SDS-PAGE to examine FV activation. As a control, we generated FV-1033 (residues 1034–1491 deleted) which is functionally equivalent to full-length FV and retains all three thrombin cleavage sites. Like FV, incubation of FV-1033 with thrombin resulted in rapid cleavage at Arg709, to generate the heavy chain (105 kDa) followed by cleavage at Arg1018 and Arg1545 to produce the light chain (74 kDa). In contrast to these results, elimination of the Arg1018 cleavage site via mutagenesis (FV-1033R1018Q) or deletion (FV-1015; 1016–1491 deleted) dramatically delayed cleavage at Arg1545 while proteolysis at Arg709 was unaltered compared to FV-1033. Control experiments with RVV-V revealed that FV-1033R1018Q and FV-1015 were rapidly cleaved at Arg1545 similar to FV-1033. These data are consistent with prior mutagenesis studies with full length FV and collectively suggest that the middle cleavage site somehow potentiates cleavage at 1545. However, further elimination of the B-domain using FV-902 (903-1491 deleted; Arg1018 not present) surprisingly restored rapid cleavage at Arg1545. These data suggest that sequences N-terminal to the 1018 site (902-1017) are involved in regulating thrombin cleavage at Arg1545 and that the purpose of cleavage at Arg1018 is to remove these constraints. In support of this, FV derivatives in which these sequences are exchanged with non-homologous regions of the FVIII B-domain were rapidly cleaved at Arg1545 whether or not Arg1018 was present. Furthermore, we were able to demonstrate that residues 964–1007 are the principal determinants in restricting thrombin cleavage at Arg1545. Functional measurements, including clotting assays, thrombin generation assays, and purified component systems revealed that FV derivatives which exhibited delayed cleavage at Arg1545 all have a markedly reduced ability to generate thrombin compared to FV-1033 or FV. Collectively these data demonstrate that FV cleavage site preferences are not only influenced by the geometric constraints imposed on thrombin but are also influenced in a dramatic way by specific B-domain sequences adjacent to Arg1018. These sequences, which conformationally restrict the ability of thrombin to access Arg1545, affect the rate and order of bond cleavage. Thus proteolysis at Arg1018 is required to alleviate these constraints allowing for accelerated cleavage at Arg1545 by thrombin. Furthermore, initial cleavage at Arg709 appears unaltered by any region of the B-domain as each of FV derivatives studied show equivalent processing at this site. These data provide new structure/function insights into the relationship between the removal of B-domain constraints and accessibility of thrombin cleavage sites which lead to the activation of FV. Disclosures: Camire: Pfizer: Patents & Royalties, Research Funding.


Blood ◽  
2004 ◽  
Vol 104 (11) ◽  
pp. 1719-1719
Author(s):  
Tivadar Orban ◽  
Adrian Grozav ◽  
Michael Buckys ◽  
Valentin Gogonea3 ◽  
Michael Kalafatis4

Abstract We have recently characterized a pentapeptide, DYDYQ, from coagulation factor V (Beck et. al. 2004J. Biol. Chem.279, 3084) that inhibits both factor V activation and prothrombinase function. The pentapeptide does not interfere with the active site of thrombin but rather interferes with substrate attachment. Our aim was to characterize at the molecular level the binding site of DYDYQ on thrombin. First we used computational methods (blind and focused docking) to propose a hypothetical binding site. Blind docking of the pentapeptide (structure obtained from a 20 ns molecular dynamics simulation) on thrombin was performed using a docking grid with large spacing. This approach provided us a favorable site (−4.8 kcal/mol) that was further investigated using a smaller spaced docking grid. Hydrogen bonding was analyzed between thrombin and DYDYQ. The final free energy of binding was −9.69 kcal/mol. Amino acids Y76R77I79I82 from thrombin anion binding exosite I (ABE-I), were identified to participate in the interaction of the enzyme with DYDYQ. We next investigated the Thrombin-DYDYQ interaction following cross-linking with 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide(EDC) and mass spectrometry. In these experiments purified thrombin was inhibited in the active site with a chloromethyl ketone, and treated with the DYDYQ peptide in the presence of EDC. Two bands were observed, one corresponding to thrombin cross linked to the peptide (CT) and another band corresponding to free thrombin (T). The proteins were either (i) stained with Coomassie blue for further digestion with trypsin or (ii) transferred to nitrocellulose membranes following by staining with Coomassie blue for treatment with cyanogen bromide (CNBr). Stained bands were isolated from the gel and subjected to trypsin digestion and liquid chromatography/mass spectrometry (LC-MS). Following trypsin digestion thrombin presence in both, T and CT samples was confirmed and the peptides identified in both samples covered approximately 63% of the entire thrombin sequence. The only difference observed between the sets of peptides obtained from T and CT following digestion with trypsin, was the peptide N78IEKISM*LEK87 (M* = oxidized Methionine), which was present in the T sample but was absent in the CT sample. These results suggest that the binding site of DYDYQ to thrombin is localized in the area of the above mentioned peptide protecting it from hydrolysis by trypsin. We next analyzed T and CT by LC-MS following CNBr digestion. Three important bands (peptide products from CNBr digestion) were detected in the sample containing the T, having an approximate molecular weight of ~4,500, ~7,500, and ~9,000. CNBr digestion products of CT lacked the median band (peptide mass: ~7,500). This band corresponded to the sequence L33…Y76ERN78IEKISM84 - as confirmed by ESI-ion trap mass spectrometry amino acid sequence of its first eleven amino acid residues. The difference between the two in gel CNBr digest profiles of T and CT, confirms the conclusion drawn from the MS analysis of the triptic digests which in turn was predicted by our computational analyses. Overall our data demonstrate that 1) amino acid residues Y76R77I79I82 from thrombin provide an interactive site for DYDYQ, and 2) our results from computational methods that identify protein-peptide interaction are valid and can be confirmed by mass spectrometry.


Blood ◽  
2005 ◽  
Vol 106 (11) ◽  
pp. 1951-1951
Author(s):  
Michael A. Bukys ◽  
Tivadar Orban ◽  
Paul Y. Kim ◽  
Michael E. Nesheim ◽  
Michael Kalafatis

Abstract The intrinsic tenase complex and the prothrombinase complex are composed of an enzyme, a cofactor, and the substrate associated on a cell surface in the presence of divalent metal ions. Incorporation of the protein cofactor in both complexes results in a substantial increase in the catalytic efficiency of both enzymes, factor IXa and factor Xa, for cleavage and activation of factor X and prothrombin respectively, resulting in normal hemostasis. The procofactors, factor V (FV) and factor VIII (fVIII), do not interact with the components of prothrombinase and intrinsic tenase respectively and must be activated. α-Thrombin has two separate electropositive binding exosites (anion binding exosite I, ABE-I and anion binding exosite II, ABE-II) that are involved in substrate binding necessary for efficient catalysis. α-Thrombin catalyzes the activation of fV and fVIII following discrete proteolytic cleavages. Requirement for both anion binding exosites of the enzyme has been suggested for the activation of both procofactors by α-thrombin. We have used plasma-derived α-thrombin, β-thrombin (a thrombin molecule that has only ABE-II available) and a recombinant prothrombin molecule rMz-II (R155A/R284A/R271A) that can only be cleaved at Arg320 (resulting in an enzymatically active molecule that has only ABE-I exposed, rMZ-IIa) to ascertain the role of each exosite for procofactor activation. We have also employed a sulfated pentapeptide (DY(SO3−)DY(SO3−)Q, named D5Q1,2) as exosite-directed inhibitor of thrombin. D5Q1,2 was found to increase thrombin time in a dose dependent manner yielding an eight-fold increase in thrombin time at 250 μM in the presence of 10 nM α-thrombin. This clotting time was equivalent to the thrombin time obtained with 10 nM β-thrombin alone. The clotting time of rMZ-IIa was increased four-fold compared to the clotting time of α-thrombin under similar experimental conditions. α-Thrombin readily activated fV following cleavages at Arg709, Arg1018, and Arg1545 and fVIII following proteolysis at Arg372, Arg740, and Arg1689. Cleavage of both procofactors by α-thrombin was significantly inhibited by D5Q1,2. In contrast, β-thrombin was unable to cleave fV at Arg1545 and fVIII at both Arg372 and Arg1689. The former is required for expression of factor Va (fVa) cofactor activity while the latter two cleavages are a prerequisite for expression of factor VIIIa (fVIIIa) cofactor activity. β-Thrombin was found to cleave fV at Arg709 and fVIII at Arg740, albeit less efficiently than α-thrombin. D5Q1,2 inhibited moderately both cleavages by β-thrombin. Under similar experimental conditions, membrane-bound rMZ-IIa cleaved and activated both procofactor molecules with a rate similar to that observed for the activation of fV and fVIII by α-thrombin. Activation of the two procofactors by membrane-bound rMZ-IIa was severely impaired by D5Q1,2. These data demonstrate that ABE-I alone of α-thrombin can account for the interaction of both procofactors with α-thrombin resulting in their timely and efficient activation. Our data also show that a sulfated pentapeptide inhibits several procoagulant ABE-I-related functions of α-thrombin and provide a target as well as the scaffold for the synthesis of an exosite-directed anticoagulant molecule that could inhibit and/or attenuate therapeutically thrombin function in individuals with thrombotic tendencies.


Blood ◽  
2018 ◽  
Vol 132 (Supplement 1) ◽  
pp. 3771-3771
Author(s):  
Manjunath Goolyam Basavaraj ◽  
Sriram Krishnaswamy

Abstract Factor VIII (FVIII) has a multi-domain structure (A1-a1-A2-a2-B-a3-A3-C1-C2), and intracellular processing within the B domain results in its secretion as a heterodimeric procofactor consisting of a variably sized heavy chain (A1-a1-A2-a2-B) and a light chain (a3-A3-C1-C2). Proteolytic cleavage by thrombin at R372, R740, and R1689 removes the B-domain, releases it from vWF by cleaving the a3-acidic region and activates FVIII to the heterotrimeric cofactor, FVIIIa (A1-a1/A2-a2/A3-C1-C2). The requirement for cleavage following a1 to generate active cofactor sets FVIII/FVIIIa apart from factor V, its structural and functional homolog. FVIII binds its cognate protease, factor IXa (FIXa) with high affinity in a membrane-dependent way. However, this complex does not efficiently activate factor X (FX) until R372 is cleaved, indicating that this cleavage reaction is important in facilitating FX recognition and its enhanced activation by intrinsic tenase complex. We speculated that separation of A1-a1 and A2-a2 domains through cleavage at R372 might be replicated by inserting a linker between A1-a1 and A2-a2 domains even when the 372 site was rendered uncleavable. We chose canine FVIII (cFVIII) to test our ideas due to its higher expression levels in cell culture compared to human FVIII. We made cDNA constructs encoding cFVIII variants with flexible (GGGGS, [GGGGS]3, GGGGGG) or rigid (EAAAK, [EAAAK]3, PAPAP) linkers between A1-a1 and A2-a2 domains on the R366Q backbone (corresponding to R372 in human FVIII). All constructs were stably transfected into BHK cells and high expressing clones were selected by one stage aPTT and western blotting of expression media. Clotting times of cFVIII variants with flexible linkers were very similar to cFVIII R366Q without linker (~64 sec). In contrast, clotting times of cFVIII variants with rigid linkers were consistently lower (16 - 26 sec). cFVIII variants (R366Q, R366Q-EAAAK, R366Q-PAPAP) were purified from 15L of expression media each. In one stage aPTT assays purified cFVIII variants (10 nM) showed clotting times (R366Q-EAAAK, 33.3 s, R366Q-PAPAP, 26 s) that were considerably shorter than the R366Q variant (52.2 s) and more in line with wild type cFVIII (cFVIII-WT,19.3 s). To assess possible cleavage at the 366 site, purified cFVIII variants were analyzed by SDS-PAGE following treatment with a high concentration of thrombin. As expected, cFVIII-WT was quantitatively cleaved at R366, R734 and R1689 to produce bands corresponding to A1-a1, A2-a2 and A3-C1-C2. In contrast, both R366Q and R366Q-PAPAP variants were resistant to cleavage at 366, yielding bands corresponding to A1-a1-A2-a2 and A3-C1-C2. The cFVIII-R366Q-EAAAK variant was susceptible to some cleavage, likely at the lysine present within linker. We also performed steady state kinetic studies of FX activation using limiting concentrations of IXa, saturating concentrations of cFVIII variants pretreated with thrombin, membranes and increasing concentrations of FX. Vmax/[E] for FXa formation was 140 ± 7 min-1 with cFVIIIa-WT, 4 ± 0.3 min-1 with cFVIIIa-R366Q, and 42 ± 4 min-1 with cFVIIIa-R366Q-PAPAP. The Km for FX remained unaffected for all variants. The results indicate that the impaired cofactor activity of the FVIII variant that is not cleaved at the 366 site can be substantially rescued by insertion of the PAPAP linker after 366Q. Further optimization of the linker might completely correct defective FX activation associated with the lack of proteolytic cleavage between A1-a1 and A2-a2 domains. Our study indicates that cleavage at the 366 site is not an absolute determinant of FVIII activation and provides new insights into the function of FVIIIa as a cofactor within the intrinsic tenase complex. Disclosures Goolyam Basavaraj: Bayer: Research Funding; Grifols: Research Funding. Krishnaswamy:Portola: Research Funding; Baxalta: Consultancy; Janssen Research & Development: Research Funding.


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