scholarly journals Marrying molecules and morphology: first steps towards a reevaluation of solariellid genera (Gastropoda: Trochoidea) in the light of molecular phylogenetic studies

2020 ◽  
Vol 86 (1) ◽  
pp. 1-26
Author(s):  
S T Williams ◽  
Y Kano ◽  
A Warén ◽  
D G Herbert
Keyword(s):  
Type Species ◽  
Morphological Characters ◽  
Shell Shape ◽  
Molecular Systematic ◽  
The Past ◽  
Phylogenetic Studies ◽  
Clade B ◽  
The Family ◽  
Molecular Phylogenetic ◽  
Anatomical Characters

ABSTRACT The assignment of species to the vetigastropod genus Solariella Wood, 1842, and therefore the family Solariellidae Powell, 1951, is complicated by the fact that the type species (Solariella maculata Wood, 1842) is a fossil described from the Upper Pliocene. Assignment of species to genera has proved difficult in the past, and the type genus has sometimes acted as a ‘wastebasket’ for species that cannot easily be referred to another genus. In the light of a new systematic framework provided by two recent publications presenting the first molecular phylogenetic data for the group, we reassess the shell characters that are most useful for delimiting genera. Shell characters were previously thought to be of limited taxonomic value above the species level, but this is far from the case. Although overall shell shape is not a reliable character, our work shows that shell characters, along with radular and anatomical characters, are useful for assigning species to genera. Sculpture of the early teleoconch (the region immediately following the protoconch) and the columella are particularly useful characters that have not been used regularly in the past to distinguish genera. However, even with the combination of all morphological characters used in this study (shell, radular and eye), a few species are still difficult to assign to genera and in such cases molecular systematic data are essential. In the present study, we discuss 13 genera—12 of which were recovered as well-supported clades in recent molecular systematic studies—and provide morphological characters to distinguish them. We describe several new taxa: Chonospeira n. gen. (referred to as ‘clade B’ in previous molecular systematic studies), Phragmomphalina n. gen. (Bathymophila in part in molecular systematic studies) and Phragmomphalina vilvensi n. sp. (type species of Phragmomphalina n. gen.). We synonymize Hazuregyra Shikama, 1962 with Minolia A. Adams, 1860, Minolia subangulata Kuroda & Habe, 1952 with Minolia punctata A. Adams, 1860 and M. gemmulata Kuroda & Habe, 1971 with M. shimajiriensis (MacNeil, 1960). We also present the following new combinations: Bathymophila bairdii (Dall, 1889), B. dawsoni (Marshall, 1979), B. regalis (Marshall, 1999), B. wanganellica (Marshall, 1999), B. ziczac (Kuroda & Habe in Kuroda, Habe & Oyama, 1971), Chonospeira nuda (Dall, 1896), C. iridescens (Habe, 1961), C. ostreion (Vilvens, 2009), C. strobilos (Vilvens, 2009), Elaphriella corona (Lee & Wu, 2001), E. diplax (Marshall, 1999), E. meridiana (Marshall, 1999), E. olivaceostrigata (Schepman, 1908), E. opalina (Shikama & Hayashi, 1977), Ilanga norfolkensis (Marshall, 1999), I. ptykte (Vilvens, 2009), I. zaccaloides (Vilvens, 2009), Minolia shimajiriensis (MacNeil, 1960), M. watanabei (Shikama, 1962), Phragmomphalina alabida (Marshall, 1979), P. diadema (Marshall, 1999), P. tenuiseptum (Marshall, 1999), Spectamen euteium (Vilvens, 2009), S. basilicum (Marshall, 1999), S. exiguum (Marshall, 1999) and S. flavidum (Marshall, 1999).

scholarly journals The Phalangopsidae crickets (Orthoptera, Grylloidea) of the Seychelles Archipelago: Taxonomy of an ecological radiation

Zootaxa ◽  
2021 ◽  
Vol 5047 (3) ◽  
pp. 201-246
Author(s):  
SYLVAIN HUGEL ◽  
BEN H. WARREN ◽  
LAURE DESUTTER-GRANDCOLAS
Keyword(s):  
New Species ◽  
Type Species ◽  
Morphological Characters ◽  
The Other ◽  
Phylogenetic Studies ◽  
Extensive Field ◽  
Molecular Phylogenetic ◽  
Ecological Radiation ◽  
The One ◽  
First Time

The Phalangopsidae crickets (Grylloidea) of the Seychelles are examined following extensive field sampling on several main islands of the archipelago (Mahé, Silhouette, Praslin, La Digue). Despite the small area of these islands, six genera (12 species) are documented, including one new genus and five new species. The type species of the genus Seychellesia Bolivar, 1912 is transferred to the genus Paragryllodes Karny, 1909 as Paragryllodes nitidula (Bolivar, 1912) n. comb. The other species described in Seychellesia are transferred to the genus Seselia Hugel & Desutter-Grandcolas, n. gen., as Seselia longicercata (Bolivar, 1912) n. comb. and Seselia patellifera (Bolivar, 1912) n. comb. Two new species are also described in the genus Seselia Hugel & Desutter-Grandcolas, n. gen., Seselia coccofessei Hugel & Desutter-Grandcolas, n. gen., n. sp. (type species of the genus) and Seselia matyoti Hugel & Desutter-Grandcolas, n. gen., n. sp. The genera Phaeogryllus Bolivar, 1912 and Phalangacris Bolivar, 1895 are redescribed, including Phalangacris ferlegro Hugel & Desutter-Grandcolas, n. sp. and Phalangacris sotsote Hugel & Desutter-Grandcolas, n. sp. that are new to science. The genus Gryllapterus Bolivar, 1912 is redescribed and transferred from the Landrevinae (Gryllidae) to the Cachoplistinae (Phalangopsidae). New tribes are defined for the genus Paragryllodes (Paragryllodini Hugel & Desutter-Grandcolas, n. tribe) on the one hand, and for Seselia Hugel & Desutter-Grandcolas, n. gen., Phalangacris, Phaeogryllus and Gryllapterus (Seselini Hugel & Desutter-Grandcolas, n. tribe) on the other, using morphological characters and the results of molecular phylogenetic studies (Warren et al. 2019). Phaloria (Papuloria) insularis (Bolivar, 1912) (Phaloriinae) is redescribed and restricted to Mahé, and its calling song is documented for the first time, while Phaloria (Papuloria) bolivari Hugel & Desutter-Grandcolas, n. sp. is newly described from Silhouette. Identification keys are proposed for the genera of Seselini Hugel & Desutter-Grandcolas, n. tribe, and for the species of Seselia Hugel & Desutter-Grandcolas, n. gen. and Phalangacris. The confusion between the Mogoplistidae Ornebius succineus Bolivar, 1912 and the Phalangopsidae Heterotrypus succineus Bolivar, 1910 is discussed, and the name Subtiloria succineus (Bolivar, 1912) considered a nomen nudum.  

Molecular phylogenetic studies of Turkish boletes with emphasis on some recently described species

Nova Hedwigia ◽  
2020 ◽  
Vol 110 (1) ◽  
pp. 99-129 ◽  
Author(s):  
Fuat Bozok ◽  
Boris Assyov ◽  
Hatıra TaşKın ◽  
Hasan Hüseyin Doğan ◽  
Saadet Büyükalaca
Keyword(s):  
Eastern Mediterranean ◽  
Original Description ◽  
Mediterranean Area ◽  
Morphological Characters ◽  
Its Rdna ◽  
Rdna Sequences ◽  
Phylogenetic Studies ◽  
The Family ◽  
Molecular Phylogenetic ◽  
Eastern Mediterranean Area

The paper presents the results of the first molecular phylogenetic assessment of ITS rDNA sequences of members of the family Boletaceae in Turkey. The still little-known species Neoboletus xanthopus and Rubroboletus demonensis are discussed based on Turkish records, which are second after their original description. Data suggest that N. xanthopus may be much more vari- able than currently known, especially what concerns the perceived distinguishing characters from N. erythropus. In addition, first collections of Rubroboletus lupinus s. l. in Turkey are also studied, showing some genetic distinction, seemingly related to the recently communicated from adjacent countries in the Eastern Mediterranean area. An updated key for identification of Turkish and extra-limital European boletes from the former Boletus s. l. is included, based on macroscopic and micro-morphological characters.

scholarly journals Molecular phylogeny, morphology and their implications for the taxonomy of Eriocaulaceae

Rodriguésia ◽  
2012 ◽  
Vol 63 (1) ◽  
pp. 001-019 ◽  
Author(s):  
Ana M. Giulietti ◽  
Maria José G. Andrade ◽  
Vera L. Scatena ◽  
Marcelo Trovó ◽  
Alessandra I. Coan ◽  
...  
Keyword(s):  
Population Genetics ◽  
Bayesian Inference ◽  
Molecular Phylogeny ◽  
New World ◽  
Additional Data ◽  
Phylogenetic Studies ◽  
The Family ◽  
Molecular Phylogenetic ◽  
Taxonomic Changes ◽  
Anatomical Characters

The pantropical family Eriocaulaceae includes ten genera and c. 1,400 species, with diversity concentrated in the New World. The last complete revision of the family was published more than 100 years ago, and until recently the generic and infrageneric relationships were poorly resolved. However, a multi-disciplinary approach over the last 30 years, using morphological and anatomical characters, has been supplemented with additional data from palynology, chemistry, embryology, population genetics, cytology and, more recently, molecular phylogenetic studies. This led to a reassessment of phylogenetic relationships within the family. In this paper we present new data for the ITS and trnL-F regions, analysed separately and in combination, using maximum parsimony and Bayesian inference. The data confirm previous results, and show that many characters traditionally used for differentiating and circumscribing the genera within the family are homoplasious. A new generic key with characters from various sources and reflecting the current taxonomic changes is presented.

Taxonomic novelties in Neotropical Chrysobalanaceae: towards a monophyletic Couepia

Phytotaxa ◽  
2014 ◽  
Vol 172 (3) ◽  
pp. 176 ◽  
Author(s):  
Cynthia Sothers ◽  
Ghillean Prance ◽  
Sven Buerki ◽  
Rogier De Kok ◽  
Mark Chase
Keyword(s):  
Type Species ◽  
New Genus ◽  
Phylogenetic Studies ◽  
The Family ◽  
Cast Doubt ◽  
Molecular Phylogenetic ◽  
Taxonomic Changes ◽  
Taxonomic Novelties

Recent molecular phylogenetic studies in Chrysobalanaceae as well as new analyses presented in this study cast doubt on the monophyly of the three largest genera in the family, Couepia, Hirtella and Licania. Couepia, a Neotropical genus, had species appearing in four separate clades, the majority of species sequenced, however, form a highly supported clade, referred to here as core Couepia (including the type species). These results lend support to a revised taxonomy of the genus, and to resolve Couepia as monophyletic the following taxonomic changes are here proposed: Couepia recurva should be transferred to Hirtella, C. platycalyx transferred to Licania, C. longipendula and C. dolichopoda transferred to Acioa, and a new genus, Gaulettia, is proposed to accommodate species of the Gaulettia clade and allies.

Elatostema perryi a new name for Elatostema humile L.M. Perry (Urticaceae)

Phytotaxa ◽  
2019 ◽  
Vol 394 (1) ◽  
pp. 118
Author(s):  
L. RASINGAM ◽  
K. KARTHIGEYAN
Keyword(s):  
New Guinea ◽  
Morphological Characters ◽  
New Name ◽  
Phylogenetic Studies ◽  
The Family ◽  
Molecular Phylogenetic

The genus Elatostema J. R. Forst. & G. Forst. belongs to the tribe Elatostemateae Gaudich. (1830: 493) of the family Urticaceae. It is one of the largest genera in the family with c. 626 accepted names and mostly distributed from tropical to subtropical regions of Africa, Asia and Oceania (Tseng & Hu, 2015; Lin et al. 2018; Fu et al. 2019). Recently, Tseng et al. (2019) provided a new circumscription for the Elatostema S.l. based on the molecular phylogenetic studies and morphological characters. Perry (1951), while studying the New Guinean flora, described Elatostema humile L. M. Perry (1951: 378) from the Idenburg river of New Guinea. This is a later homonym of the Fijian species Elatostema humile A.C. Sm. (1942: 22) and so illegitimate according to article 53.1 of ICN (Turland et al. 2018). Therefore, a replacement name, Elatostema perryi is proposed here.

Transfer of the Kobresia taxa of the flora of Russia and adjacent countries to the genus Carex (Cyperaceae)

2020 ◽  
pp. 125-129
Author(s):  
D. G. Melnikov ◽  
L. I. Krupkina
Keyword(s):  
International Collaboration ◽  
Morphological Characters ◽  
Published Data ◽  
Phylogenetic Studies ◽  
Molecular Phylogenetic ◽  
New Nomenclatural Combinations

Based on the published data of molecular phylogenetic studies of the tribe Cariceae Dumort. genera (Cyperaceae), obtained by an international collaboration (The Global Carex Group, 2016; et al.), and morphological characters of the genera (Kukkonen, 1990; and others), new nomenclatural combinations and replacement names in the genus Carex L. are published for 11 species, one subspecies and two sections previously included in the genus Kobresia Willd.

Three new species, two new genera, and new family Biphragmosagittidae (Сhaetognatha) from Southwest Pacific Ocean

2011 ◽  
Vol 20 (1) ◽  
pp. 161-173
Author(s):  
A.P. Kassatkina
Keyword(s):  
New Species ◽  
Type Species ◽  
Morphological Characters ◽  
The Body ◽  
New Order ◽  
New Genera ◽  
New Family ◽  
The Family ◽  
Three New Species

Resuming published and own data, a revision of classification of Chaetognatha is presented. The family Sagittidae Claus & Grobben, 1905 is given a rank of subclass, Sagittiones, characterised, in particular, by the presence of two pairs of sac-like gelatinous structures or two pairs of fins. Besides the order Aphragmophora Tokioka, 1965, it contains the new order Biphragmosagittiformes ord. nov., which is a unique group of Chaetognatha with an unusual combination of morphological characters: the transverse muscles present in both the trunk and the tail sections of the body; the seminal vesicles simple, without internal complex compartments; the presence of two pairs of lateral fins. The only family assigned to the new order, Biphragmosagittidae fam. nov., contains two genera. Diagnoses of the two new genera, Biphragmosagitta gen. nov. (type species B. tarasovi sp. nov. and B. angusticephala sp. nov.) and Biphragmofastigata gen. nov. (type species B. fastigata sp. nov.), detailed descriptions and pictures of the three new species are presented.

Phylogenetic relationships of Mediterranean black corals (Cnidaria : Anthozoa : Hexacorallia) and implications for classification within the order Antipatharia

2018 ◽  
Vol 32 (5) ◽  
pp. 1102 ◽  
Author(s):  
M. Bo ◽  
M. Barucca ◽  
M. A. Biscotti ◽  
M. R. Brugler ◽  
A. Canapa ◽  
...  
Keyword(s):  
Type Species ◽  
Sequence Data ◽  
Coral Fauna ◽  
Black Coral ◽  
Phylogenetic Studies ◽  
Black Corals ◽  
The Family ◽  
The Mediterranean ◽  
Its1 And Its2 Rdna ◽  
Its1 And Its2

The Mediterranean black coral fauna includes type species of four antipatharian genera belonging to four different families, therefore phylogenetic studies hold great potential for enhancing systematics within the order. The analysis of six Mediterranean antipatharian species by means of nuclear sequence data of internal transcribed spacer (ITS1 and ITS2) rDNA confirms the separation into different families, as was previously noted on a morphological basis, with a clear distinction of the family Leiopathidae, whose position is supported by a unique number of mesenteries and lack of spines on thicker ramifications. The position of a newly recorded black coral species for the Mediterranean basin belonging to the genus Phanopathes is discussed. Antipathes dichotoma, the type species of the genus Antipathes, on which the order Antipatharia was based, does not group with other members of the family Antipathidae. Supporting a recent finding based on mitochondrial markers, this suggests a critical need for revision of the families that will be impacted by reassignment of this nomenclaturally important taxon.

Bursaphelenchus rufipennis n. sp. (Nematoda: Parasitaphelenchinae) and redescription of Ektaphelenchus obtusus (Nematoda: Ektaphelenchinae), associates from nematangia on the hind wings of Dendroctonus rufipennis (Coleoptera: Scolytidae)

Nematology ◽  
2008 ◽  
Vol 10 (6) ◽  
pp. 925-955 ◽  
Author(s):  
Natsumi Kanzaki ◽  
Robin M. Giblin-Davis ◽  
Yasmin J. Cardoza ◽  
Weimin Ye ◽  
Kenneth F. Raffa ◽  
...  
Keyword(s):  
New Species ◽  
Morphological Characters ◽  
Morphological Examination ◽  
Dendroctonus Rufipennis ◽  
Lateral Field ◽  
The Past ◽  
Female Tail ◽  
Molecular Phylogenetic ◽  
Voucher Specimens ◽  
Tail Tip

Abstract Two species of aphelench, Bursaphelenchus rufipennis n. sp. and Ektaphelenchus obtusus, were isolated from the 'nematangia', cocoon-like structures found at the base of the hind wings of Dendroctonus rufipennis. The nematangia contained adult females of E. obtusus and the dauer juveniles of B. rufipennis n. sp. Only B. rufipennis n. sp. could be cultured on Monilinia fructicola on LGPDA (lactic acid-treated, glycerol-supplemented, potato dextrose agar). The new species of Bursaphelenchus is described and figured and some additional morphological characters are ascribed to E. obtusus, E. josephi, E. sandiaensis, E. smaelus (= E. prolobos) and E. terebranus after examination of type and/or voucher specimens. Bursaphelenchus rufipennis n. sp. has an adult body length of ca 500-1000 μm, medium a ratios (ca 25-38 for females and ca 30-40 for males), b ratios of ca 8-13 (female) and 7-11 (male), c ratios of ca 15-22 (female and male), c′ ratios of ca 3-4 (female) and ca 2-3 (male), and is characterised by three incisures in the lateral field, mitten-shaped spicules and a conical female tail that curves ventrally and possesses a variable tail tip. The new species is morphologically closest to B. corneolus, B. curvicaudatus, B. gerberae, B. paracorneolus and B. talonus. Morphological examination of type and/or voucher specimens of five Ektaphelenchus species revealed coarse transverse body annulation and three pairs of male caudal papillae (except for the two species where males are not described). Clear typological differences were observed among these five Ektaphelenchus species in the structure of the lip region, presence/absence of stylet knobs and male spicule morphology. Although these characters have not been consistently documented in the past, they may be diagnostic for species in the genus. Molecular phylogenetic analysis based on SSU and D2/D3 LSU sequences revealed that B. rufipennis n. sp. was closest to B. paracorneolus and that E. obtusus was closest to species of Ektaphelenchoides and a Cryptaphelenchus sp.

Paracarphalea, a new genus of the coffee family segregated from the Malagasy endemic genus Carphalea (Rubiaceae, Rubioideae, Knoxieae)

Phytotaxa ◽  
2016 ◽  
Vol 263 (2) ◽  
pp. 98 ◽  
Author(s):  
JULIA FERM ◽  
JESPER KÅREHED ◽  
BIRGITTA BREMER ◽  
SYLVAIN G. RAZAFIMANDIMBISON
Keyword(s):  
Bayesian Methods ◽  
Type Species ◽  
New Genus ◽  
Sequence Data ◽  
Conservation Status ◽  
Endemic Genus ◽  
Phylogenetic Studies ◽  
Molecular Phylogenetic ◽  
Nuclear Its ◽  
Iucn Criteria

The Malagasy genus Carphalea (Rubiaceae) consists of six species (C. angulata, C. cloiselii, C. kirondron, C. linearifolia, C. madagascariensis, C. pervilleana) of shrubs or small trees and is recognizable by a distinctly lobed calyx, 2(–4)-locular ovaries, each locule with several ovules on a rod-like stalk arising from the base of the locule, and indehiscent fruits. Carphalea linearifolia, rediscovered in 2010, has not previously been included in any Rubiaceae molecular phylogenetic studies. We re-investigated the monophyly of Carphalea using sequence data from chloroplast (rps16 and trnT-F) and nuclear (ITS and ETS) markers analysed with parsimony and Bayesian methods. Carphalea linearifolia forms a clade with C. cloiselii and the type species C. madagascariensis. This clade is sister to a clade consisting of the rest of the Carphalea species plus the genus Triainolepis. According to these results, the new genus Paracarphalea is here described to accommodate Carphalea angulata, C. kirondron, and C. pervilleana. The conservation status of Carphalea linearifolia is assessed as critically endangered according to IUCN criteria.

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