Zippers: Base Catalysis

Reactions ◽  
2011 ◽  
Author(s):  
Peter Atkins

A base, you should recall from Reaction 2, is the second hand clapping to the acid’s first. That is, whereas an acid is a proton donor, a base is its beneficiary as a proton acceptor. The paradigm base is a hydroxide ion, OH–, which can accept a proton and thereby become H2O. However, in the context of catalysis, the topic of this section, its role is rather different: instead of using its electrons to accept the proton, it uses them to behave as a nucleophile (Reaction 15), a searcher out of positive charge. Instead of forming a hydrogen–oxygen bond with an incoming proton, it sets the electronic fox among the electronic geese of a molecule by forming a new carbon–oxygen bond and thereby loosening the bonds to neighbouring atoms so that they can undergo rearrangement. The OH– ion in effect unzips the molecule and renders it open to further attack. Base catalysis has a lot of important applications. An ancient one is the production of soap from animal fat. To set that scene, I shall consider a simple model system, the ‘hydrolysis’ (severing apart by water) of the two components of an ester, 1 (the same compound I used in Reaction 17, a combination of acetic acid and ethanol), and then turn to soap-making itself. You saw in Reaction 17 how esters can be broken down into their components, a carboxylic acid and an alcohol, by an acid; here we see the analogous reaction in the presence of a base. To be specific, the reagent is a solution of sodium hydroxide, which provides the OH– ions that catalyse the reaction. We watch what happens when a solution of sodium hydroxide is added to an ester and the mixture is boiled. The O oxygen atoms of the ester have already ripened the molecule for nucleophilic attack by drawing some of the electron cloud away from the C atom to which they are both attached, leaving it with a partial positive charge, 2. The negatively charged OH– ion sniffs out that positive charge and jostles in to do its business.

Reactions ◽  
2011 ◽  
Author(s):  
Peter Atkins

I explained the general basis of catalysis in Reaction 11, where I showed that it accelerated a reaction by opening a new, faster route from reactants to products. One of the ways to achieve catalysis in organic chemistry is to carry out a reaction in an acidic or basic (alkaline) environment, and that is what I explore here. In Reaction 27 you will see the enormous importance of processes like this, not just for keeping organic chemists productive but also for keeping us all alive; I give a first glimpse of that later in this section too. Various kinds of acid and base catalysis, sometimes both simultaneously, are going on throughout the cells of our body and ensuring that all the processes of life are maintained; in fact they are the very processes of life. I deal with acid catalysis in this section and base catalysis in the next. The point to remember throughout this section is that an acid is a proton donor (Reaction 2) and a proton is an aggressive, nutty little centre of positive charge. If a proton gets itself attached to a molecule, it can draw electrons towards itself and so expose the nuclei that they formerly surrounded. That is, a proton can cause the appearance of positive charge elsewhere in the molecule where the nuclei shine through the depleted fog of electrons. Because positive charge is attracted to negative charge, one outcome is that a molecule may be converted into a powerful electron-sniffing electrophile (Reaction 16). Another way of looking at the outcome of adding a proton is to note that a C atom with a positive charge is a target for nucleophilic missile attack (Reaction 15). Therefore, if a proton draws the electron cloud away from a nearby atom, then its presence is like a fifth-column agent preparing a target for later attack. Let’s shrink and watch as some acid is added to a molecule that contains a –CO– group, such as acetic acid. The protons provided by the added acid are riding on water molecules, as H3O+ ions, and arrive in the vicinity of the acetic acid molecule.


2018 ◽  
Vol 2018 ◽  
pp. 1-15 ◽  
Author(s):  
Paweł Misiak ◽  
Alina T. Dubis ◽  
Andrzej Łapiński

The formation of an intramolecular hydrogen bond in pyrrolo[1,2-a]pyrazin-1(2H)-one bicyclic diazoles was analyzed, and the influence of N-substitution on HB formation is discussed in this study. B3LYP/aug-cc-pVDZ calculations were performed for the diazole, and the quantum theory of atoms in molecules (QTAIM) approach as well as the natural bond orbital (NBO) method was applied to analyze the strength of this interaction. It was found that the intramolecular hydrogen bond that closes an extra ring between the C=O proton acceptor group and the CH proton donor, that is, C=O⋯H–C, influences the spectroscopic properties of pyrrolopyrazine bicyclic diazoles, particularly the carbonyl frequencies. The influence of N-substitution on the aromaticity of heterocyclic rings is also discussed in this report.


Author(s):  
N.U. Mulloev ◽  
◽  
N.L. Lavrik ◽  
J.O. Yusypova ◽  
N.A. Majidov ◽  
...  

An experimental method is proposed for determining the efficiency of the formation of intermolecular hydrogen bonds by determining the formation constant of the H-complex (K). The essence of the experiment to determine the value of K is that for one initial concentration of the proton donor, it is necessary to register the change in the optical density at the absorption wavelength of the monomers and the change in the optical density of the complexes of IR absorption bands at two concentrations of the proton acceptor. This approach was tested on the example of the interaction of butyl alcohol (proton donor) with 4-chloromethyl-1.3-dioxolane (proton acceptor). The obtained value of the equilibrium constant was 72.2 M-1. It is concluded that the proposed method for determining the value of K can be used not only in IR, but also in UV-visible spectroscopy.


1955 ◽  
Vol 33 (1) ◽  
pp. 128-133 ◽  
Author(s):  
R. U. Lemieux ◽  
G. Huber

3,4,6-Tri-O-acetyl-β-D-glucopyranosyl chloride was found to undergo solvolysis in acetic acid to form 1,3,4,6-tetra-O-acetyl-α-D-glucopyranose as the main reaction product. The much less reactive anomeric α-chloride also appeared to undergo solvolysis with extensive inversion of the anomeric center. It is submitted that the tendencies for inversion obtained in these ionic reactions are due to the conformations imposed on the intermediate ions through distribution of the positive charge to the ring oxygen and the consequent introduction of double-bond character to the carbon-1 to ring-oxygen bond.


1982 ◽  
Vol 60 (10) ◽  
pp. 1183-1186 ◽  
Author(s):  
J. N. Spencer ◽  
E. S. Holmboe ◽  
M. R. Kirshenbaum ◽  
S. W. Barton ◽  
K. A. Smith ◽  
...  

The proton-donating and -accepting abilities of water and methanol to various nitrogen-containing compounds have been determined by calorimetric analysis. Water is a better proton donor than methanol but methanol is a better proton acceptor than water. The interactions by water and methanol at the nitrogens of the diazines follow trends expected from relative proton affinities, pK's, and theoretical calculations. Electrostatic interactions by the diazine nitrogens with pyridine parallel the interactions found for methanol and water at these nitrogens.


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