scholarly journals Bean dwarf mosaic virus BV1 Protein Is a Determinant of the Hypersensitive Response and Avirulence in Phaseolus vulgaris

2000 ◽  
Vol 13 (11) ◽  
pp. 1184-1194 ◽  
Author(s):  
E. R. Garrido-Ramirez ◽  
M. R. Sudarshana ◽  
W. J. Lucas ◽  
R. L. Gilbertson
Keyword(s):  
Phaseolus Vulgaris ◽  
Mosaic Virus ◽  
Hypersensitive Response ◽  
Yellow Mosaic Virus ◽  
Reading Frame ◽  
Golden Yellow ◽  
Green Florescent Protein ◽  
Bean Hypocotyl ◽  
Bean Dwarf Mosaic Virus ◽  
Viral Determinants

The capacities of the begomoviruses Bean dwarf mosaic virus (BDMV) and Bean golden yellow mosaic virus (BGYMV) to differentially infect certain common bean (Phaseolus vulgaris) cultivars were used to identify viral determinants of the hypersensitive response (HR) and avirulence (avr) in BDMV. A series of hybrid DNA-B components, containing BDMV and BGYMV sequences, was constructed and coinoculated with BDMV DNA-A (BDMV-A) or BDMVA-green florescent protein into seedlings of cv. Topcrop (susceptible to BDMV and BGYMV) and the BDMV-resistant cvs. Othello and Black Turtle Soup T-39 (BTS). The BDMV avr determinant, in bean hypocotyl tissue, was mapped to the BDMV BV1 open reading frame and, most likely, to the BV1 protein. The BV1 also was identified as the determinant of the HR in Othello. However, the HR was not required for resistance in Othello nor was it associated with BDMV resistance in BTS. BDMV BV1, a nuclear shuttle protein that mediates viral DNA export from the nucleus, represents a new class of viral avr determinant. These results are discussed in terms of the relationship between the HR and resistance.

scholarly journals TEMPORAL AND SPATIAL DISSEMINATION OF BEAN GOLDEN YELLOW MOSAIC VIRUS (BEGOMOVIRUS) IN PHASEOLUS VULGARIS 'JAMAICA RED’

1969 ◽  
Vol 91 (3-4) ◽  
pp. 207-214
Author(s):  
Lydia I. Rivera-Vargas ◽  
Vilmaris Bracero-Acosta ◽  
James S. Beaver
Keyword(s):  
Phaseolus Vulgaris ◽  
Mosaic Virus ◽  
Yellow Mosaic Virus ◽  
Golden Yellow ◽  
Temporal And Spatial

TEMPORAL AND SPATIAL DISSEMINATION OF BEAN GOLDEN YELLOW MOSAIC VIRUS (BEGOMOVIRUS) IN PHASEOLUS VULGARIS 'JAMAICA RED’

scholarly journals Screening Metagenomic Data for Viruses Using the E-Probe Diagnostic Nucleic Acid Assay

2014 ◽  
Vol 104 (10) ◽  
pp. 1125-1129 ◽  
Author(s):  
A. H. Stobbe ◽  
W. L. Schneider ◽  
P. R. Hoyt ◽  
U. Melcher
Keyword(s):  
Nucleic Acid ◽  
Mosaic Virus ◽  
Yellow Mosaic Virus ◽  
Metagenomic Data ◽  
Data Sets ◽  
Virus Species ◽  
Data Set ◽  
Golden Yellow ◽  
Nucleic Acid Assay ◽  
Ngs Data

Next generation sequencing (NGS) is not used commonly in diagnostics, in part due to the large amount of time and computational power needed to identify the taxonomic origin of each sequence in a NGS data set. By using the unassembled NGS data sets as the target for searches, pathogen-specific sequences, termed e-probes, could be used as queries to enable detection of specific viruses or organisms in plant sample metagenomes. This method, designated e-probe diagnostic nucleic acid assay, first tested with mock sequence databases, was tested with NGS data sets generated from plants infected with a DNA (Bean golden yellow mosaic virus, BGYMV) or an RNA (Plum pox virus, PPV) virus. In addition, the ability to detect and differentiate among strains of a single virus species, PPV, was examined by using probe sets that were specific to strains. The use of probe sets for multiple viruses determined that one sample was dually infected with BGYMV and Bean golden mosaic virus.

scholarly journals Detecting bean golden yellow mosaic virus in bean breeding lines and in the common legume weed Macroptilium lathyroides in Puerto Rico.

1969 ◽  
Vol 85 (3-4) ◽  
pp. 165-176
Author(s):  
Lydia I. Rivera-Vargas ◽  
Vilmaris Bracero-Acosta ◽  
James S. Beaver ◽  
Dan E. Purcifull ◽  
Jane E. Polston ◽  
...  
Keyword(s):  
Puerto Rico ◽  
Mosaic Virus ◽  
Yellow Mosaic Virus ◽  
Phaseolus Vulgaris L ◽  
Breeding Lines ◽  
Golden Yellow ◽  
Enzymelinked Immunosorbent Assay ◽  
The Common ◽  
Polymerase Chain ◽  
Macroptilium Lathyroides

Bean golden yellow mosaic virus (BGYMV) is a geminivirus transmitted by whiteflies (Genus: Bemisia). This virus causes significant fosses in common bean (Phaseolus vulgaris L.). Serological techniques such as enzymelinked immunosorbent assay (ELISA) have been widely used for detection of viruses. We evaluated existing monoclonal antibodies (3F7,2G5 and 5C5) for the detection of BGYMV isolates in bean fines in Puerto Rico. Monoclonal antibody 3F7 was the most effective in detecting the virus in tissues of line DOR 364 and susceptible cuftivars Top Crop and Quest. However, it was not effective in the detection of BGYMV in lines of DOR 303, which showed typical symptoms. Sampfes from Macroptilium lathyroides, a weed that might be a possible reservoir of the virus, were also tested for viraf infection. ELISA tests were inconclusive for detection of geminiviruses in M. lathyroides. Polymerase Chain Reaction (PCR) was also used to complement BGYMV diagnosis in M. lathyroides and in bean lines that showed symptoms but were negative for the ELfSA test. Two sets of primers, specific for Begomovirus such as BGYMV, were used in PCR experiments. Using PCR, we were able to detect the virus in the line DOR 303 and in M. lathyroides tissues.

scholarly journals Two Newly Described Begomoviruses of Macroptilium lathyroides and Common Bean

2003 ◽  
Vol 93 (7) ◽  
pp. 774-783 ◽  
Author(s):  
A. M. Idris ◽  
E. Hiebert ◽  
J. Bird ◽  
J. K. Brown
Keyword(s):  
Common Bean ◽  
Mosaic Virus ◽  
Dna Sequences ◽  
Western Hemisphere ◽  
Yellow Mosaic Virus ◽  
Nucleotide Identity ◽  
Caribbean Region ◽  
Golden Yellow ◽  
The Caribbean ◽  
Macroptilium Lathyroides

Macroptilium lathyroides, a perennial weed in the Caribbean region and Central America, is a host of Macroptilium yellow mosaic Florida virus (MaYMFV) and Macroptilium mosaic Puerto Rico virus (MaMPRV). The genomes of MaYMFV and MaMPRV were cloned from M. lathyroides and/or field-infected bean and the DNA sequences were determined. Cloned A and B components for both viruses were infectious when inoculated to M. lathyroides and common bean. Comparison of the DNA sequences for cloned A and B components with well-studied begomovirus indicated that MaMPRV (bean and M. lathyroides) and MaYMFV (M. lathyroides) are unique, previously undescribed begomo-viruses from the Western Hemisphere. Phylogenetic analysis of viral A components indicated that the closest relative of MaYMFV are members of the Bean golden yellow mosaic virus (BGYMV) group, at 76 to 78% nucleotide identity, whereas the closest relative for the A component of MaMPRV was Rhynchosia golden mosaic virus at 78% nucleotide identity. In contrast, BGYMV is the closest relative for the B component of both MaYMFV and MaMPRV, with which they share ≈68.0 and ≈72% identity, respectively. The incongruent taxonomic placement for the bipartite components for MaMPRV indicates that they did not evolve entirely along a common path. MaYMFV and MaMPRV caused distinctive symptoms in bean and M. lathyroides and were transmissible by the whitefly vector and by grafting; however, only MaYMFV was mechanically transmissible. The experimental host range for the two viruses was similar and included species within the families Fabaceae and Malvaceae, but only MaYMFV infected Malva parviflora and soybean. These results collectively indicate that MaMPRV and MaYMFV are new, previously undescribed species of the BGYMV group, a clade previously known to contain only strains and isolates of BGYMV from the Caribbean region that infect Phaseolus spp. Both MaYMFV and MaMPRV may pose an economic threat to bean production in the region.

scholarly journals DNA Analysis Confirms Macroptilium lathyroides as Alternative Host of Bean golden yellow mosaic virus

Plant Disease ◽  
2003 ◽  
Vol 87 (9) ◽  
pp. 1022-1025 ◽  
Author(s):  
V. Bracero ◽  
L. I. Rivera ◽  
J. S. Beaver
Keyword(s):  
Sequence Analysis ◽  
Nucleotide Sequence ◽  
Mosaic Virus ◽  
Yellow Mosaic Virus ◽  
Nucleotide Sequence Analysis ◽  
Alternative Host ◽  
Degenerate Primers ◽  
Viral Dna ◽  
Golden Yellow ◽  
Macroptilium Lathyroides

The leguminous weed Macroptilium lathyroides is considered a potential host of the Bean golden yellow mosaic virus (BGYMV; BGMV = Mesoamerican isolates). To determine if M. lathyroides could be a host for BGYMV, an infectivity cycle was established between this weed and Phaseolus vulgaris. Virus transmission was carried out using the whitefly, Bemisia argentifolli, as a vector. Inoculated plants of both species were examined for symptoms such as mosaic, stunting, and leaf distortion. P. vulgaris and M. lathyroides showed golden yellow mosaic symptoms during all infectivity cycle stages. Symptomatic plants of both species were tested for BGYMV using polymerase chain reaction (PCR) and nucleotide sequence analysis. Two degenerate primers sets were used for PCR to detect viral DNA: PAL1v1978/PAR1c715 and PCRc2/PBL12039. PCR analysis using primers PCRc2/PBL12039 amplified viral DNA for component B from both plant species. Nucleotide sequence analysis revealed a 93% identity between the virus isolated from M. lathyroides and the Puerto Rican isolate of BGYMV. These results confirmed that M. lathyroides could serve as an alternative host of BGYMV and that an infectivity cycle of BGYMV could possibly occur between P. vulgaris and M. lathyroides in Puerto Rico.

scholarly journals Calopogonium golden mosaic virus Identified in Phaseolus vulgaris from Western and Northern Regions of Costa Rica

Plant Disease ◽  
2002 ◽  
Vol 86 (2) ◽  
pp. 188-188 ◽  
Author(s):  
M. Diaz ◽  
D. P. Maxwell ◽  
J. P. Karkashian ◽  
P. Ramírez
Keyword(s):  
Costa Rica ◽  
Phaseolus Vulgaris ◽  
Mosaic Virus ◽  
Central America ◽  
Western Hemisphere ◽  
Degenerate Primer ◽  
Yellow Mosaic Virus ◽  
Agricultural Crop ◽  
Sequence Comparisons ◽  
Northern Regions

Bean golden yellow mosaic virus (BGYMV, GenBank Accession No. M91604) is reported to be the main bean-infecting (Phaseolus vulgaris) begomovirus in Central America (1,2). Another begomovirus, Bean calico mosaic virus (BCaMV, GenBank Accession No. AF110189), is known to infect P. vulgaris in central Mexico. Bean samples with the viral symptom of foliar chlorosis were collected in different regions of Costa Rica from 1994 to 2001. Total nucleic acids were extracted and tested using polymerase chain reaction (PCR) with degenerate primer pair PBL1v2039/PCRc2 for DNA-B, which can give a different fragment size for some begomoviruses (4). PCR fragments were obtained from 119 bean samples. Fifty samples from the central valley produced 600-bp PCR fragments, which is typical for BGYMV (4), and one sample produced two fragments (500 and 600 bp). One sample from western Costa Rica had a 550-bp fragment, and 69 samples from the western and northern regions produced 500-bp fragments. One of the latter samples (No. 01-1152) was selected for PCR with degenerate primer pairs PAL1v1978/PAR1c715 for DNA-A and PBL1v2039/PBR1v800 for DNA-B (4). The amplified PCR fragments were 1.35 and 1.4 kb for DNA-A and DNA-B, respectively. These are expected sizes for a Western Hemisphere begomovirus. The DNA-A fragment was cloned and sequenced (GenBank Accession No. AF439402). Sequence comparisons indicated that this uncharacterized begomovirus (No. 01-1152) had 98, 97, and 93% nucleotide identities with the rep gene, common region, and coat protein gene promoter of Calopogonium golden mosaic virus (CalGMV, GenBank Accession Nos. AF439748 and AF439749, respectively) (3). CalGMV had been isolated from a weed, Calopogonium sp., collected in 1991 near Quepos in the west and Tilaran in the north of Costa Rica (3). Phylogenetic analysis of the viral sequence of the begomovirus associated with No. 01-1152 placed it in the Squash leaf curl virus clade (1). BCaMV is also in this phylogenetic clade, but sequence comparisons between CalGMV and BCaMV had <90% nucleotide identity, and so are distinct species. CalGMV is the begomovirus associated with No. 01-1152, and this is an example of the movement of a weed-infecting begomovirus into an agricultural crop. Since this Calopogonium sp. is widespread in Central America, it is important to determine if CalGMV is present in beans in other regions. The data also indicate that BGYMV and CalGMV infect beans in two geographically distinct regions of Costa Rica. References: (1) J. C. Faria et al. Phytopathology 84:321, 1994. (2) W. McLaughlin et al. Plant Dis. 78:1220, 1994. (3) M. R. Rojas et al. Annu. Rep. Bean Improv. Coop. 35:150, 1992. (4) M. R. Rojas et al. Plant Dis. 77:340, 1993.

scholarly journals Serological Studies Using Polyclonal Antisera Prepared Against the Viral Coat Protein of Four Begomoviruses Expressed in Escherichia coli

Plant Disease ◽  
2002 ◽  
Vol 86 (10) ◽  
pp. 1109-1114 ◽  
Author(s):  
A. M. Abouzid ◽  
J. Freitas-Astua ◽  
D. E. Purcifull ◽  
J. E. Polston ◽  
K. A. Beckham ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Coat Protein ◽  
Mosaic Virus ◽  
Yellow Mosaic Virus ◽  
Enzyme Linked Immunosorbent Assay ◽  
Thin Sections ◽  
Golden Yellow ◽  
Polyclonal Antisera ◽  
Leaf Curl Virus ◽  
Leaf Curl

Polyclonal rabbit antisera were produced to the coat protein of Bean golden mosaic virus Brazil isolate (BGMV), Cabbage leaf curl virus (CabLCV), Tomato yellow leaf curl virus (TYLCV), and Tomato mottle virus (ToMoV), all expressed in Escherichia coli by the pETh expression vector. The expressed coat protein of each virus was purified by sodium dodecyl sulfate-polyacrylamide gel electrophoresis for use as an immunogen. The antisera to BGMV, CabLCV, TYLCV, and ToMoV reacted in indirect (plate-trapping) enzyme-linked immunosorbent assay (ELISA) with extracts from begomovirus-infected tissue. The antisera to BGMV, CabLCV, TYLCV, and ToMoV also reacted specifically with the test begomovirus antigens in leaf imprint blots and Western blots. The CabLCV and TYLCV antisera were used to detect Bean golden yellow mosaic virus antigens by immunogold labeling of thin sections of infected bean tissues. In tissue blot immunoassays, the TYLCV antiserum reacted well with TYLCV antigens but not with ToMoV antigens, while CabLCV antiserum reacted well with ToMoV antigens and weakly with TYLCV antigens. The results indicate that polyclonal antisera prepared to expressed begomovirus coat proteins were useful for the detection of begomoviruses in an array of assays.

Sign in / Sign up

Export Citation Format

Share Document