scholarly journals Characterization of Colletotrichum Species Causing Anthracnose of Pomegranate in the Southeastern United States

Plant Disease ◽  
2019 ◽  
Vol 103 (11) ◽  
pp. 2771-2780 ◽  
Author(s):  
Katia V. Xavier ◽  
Achala N. KC ◽  
Natalia A. Peres ◽  
Zhanao Deng ◽  
William Castle ◽  
...  
Keyword(s):  
United States ◽  
Species Complex ◽  
Southeastern United States ◽  
Leaf Blight ◽  
Fruit Rot ◽  
Internal Transcribed Spacer Region ◽  
Colletotrichum Species ◽  
Species Complexes ◽  
Commercially Important ◽  
Pomegranate Fruit

Anthracnose fruit rot and leaf blight caused by Colletotrichum species are important diseases of pomegranate in the southeastern United States. In this study, 26 isolates from pomegranate were identified based on pathological and molecular characterization. Isolates were identified to species based on multilocus sequence analysis with the internal transcribed spacer region, glyceraldehyde-3-phosphate dehydrogenase, β-tubulin, and chitin synthase genomic genes. Pomegranate isolates grouped within the C. acutatum and C. gloeosporioides species complexes, with more than 73% belonging to the latter group. Three species were identified within the C. acutatum species complex (C. nymphaeae [n = 5], C. fioriniae [n = 1], and C. simmondsii [n = 1]), and three other species were identified within the C. gloeosporioides species complex (C. theobromicola [n = 11], C. siamense [n = 6], and C. gloeosporioides [n = 2]). Inoculations of pomegranate fruit showed that isolates from the C. acutatum species complex were more aggressive than isolates from the C. gloeosporioides species complex. Interestingly, opposite results were observed when leaves of rooted pomegranate cuttings were inoculated. In addition, Colletotrichum isolates from pomegranate, strawberry, blueberry, mango, and citrus were cross-pathogenic when inoculated to fruit. This is the first study identifying six different species of Colletotrichum causing pomegranate leaf blight and fruit anthracnose in the southeastern United States and the potential cross-pathogenic capability of pomegranate isolates to other commercially important crops.

scholarly journals Fungicide Rotation Programs for Managing Phytophthora Fruit Rot of Watermelon in Southeastern United States

2017 ◽  
Vol 18 (1) ◽  
pp. 28-34 ◽  
Author(s):  
Chandrasekar (Shaker) S. Kousik ◽  
Pingsheng Ji ◽  
Daniel S. Egel ◽  
Lina M. Quesada-Ocampo
Keyword(s):  
United States ◽  
South Carolina ◽  
Phytophthora Capsici ◽  
Southeastern United States ◽  
Heavy Rain ◽  
Integrated Approach ◽  
The United States ◽  
Fruit Rot ◽  
Management Options ◽  
Before And After

About 50% of the watermelons in the United States are produced in the southeastern states, where optimal conditions for development of Phytophthora fruit rot prevail. Phytophthora fruit rot significantly limits watermelon production by causing serious yield losses before and after fruit harvest. Efficacy of fungicide rotation programs and Melcast-scheduled sprays for managing Phytophthora fruit rot was determined by conducting experiments in Phytophthora capsici-infested fields at three locations in southeastern United States (North Carolina, South Carolina, and Georgia). The mini seedless cultivar Wonder and seeded cultivar Mickey Lee (pollenizer) were used. Five weekly applications of fungicides were made at all locations. Significant fruit rot (53 to 91%, mean 68%) was observed in the nontreated control plots in all three years (2013 to 2015) and across locations. All fungicide rotation programs significantly reduced Phytophthora fruit rot compared with nontreated controls. Overall, the rotation of Zampro alternated with Orondis was highly effective across three locations and two years. Rotations of Actigard followed by Ranman+Ridomil Gold, Presidio, V-10208, and Orondis, or rotation of Revus alternated with Presidio were similarly effective. Use of Melcast, a melon disease-forecasting tool, may occasionally enable savings of one spray application without significantly impacting control. Although many fungicides are available for use in rotations, under very heavy rain and pathogen pressure, the fungicides alone may not offer adequate protection; therefore, an integrated approach should be used with other management options including well-drained fields.

scholarly journals Veterinary Fusarioses within the United States

2016 ◽  
Vol 54 (11) ◽  
pp. 2813-2819 ◽  
Author(s):  
Kerry O'Donnell ◽  
Deanna A. Sutton ◽  
Nathan Wiederhold ◽  
Vincent A. R. G. Robert ◽  
Pedro W. Crous ◽  
...  
Keyword(s):  
United States ◽  
Dna Sequence ◽  
Species Complex ◽  
Sequence Data ◽  
Phylogenetic Analyses ◽  
Distinct Species ◽  
The United States ◽  
Content Type ◽  
Dna Sequence Data ◽  
Species Complexes

Multilocus DNA sequence data were used to assess the genetic diversity and evolutionary relationships of 67Fusariumstrains from veterinary sources, most of which were from the United States. Molecular phylogenetic analyses revealed that the strains comprised 23 phylogenetically distinct species, all but two of which were previously known to infect humans, distributed among eight species complexes. The majority of the veterinary isolates (47/67 = 70.1%) were nested within theFusarium solanispecies complex (FSSC), and these included 8 phylospecies and 33 unique 3-locus sequence types (STs). Three of the FSSC species (Fusarium falciforme,Fusarium keratoplasticum, andFusariumsp. FSSC 12) accounted for four-fifths of the veterinary strains (38/47) and STs (27/33) within this clade. Most of theF. falciformestrains (12/15) were recovered from equine keratitis infections; however, strains ofF. keratoplasticumandFusariumsp. FSSC 12 were mostly (25/27) isolated from marine vertebrates and invertebrates. Our sampling suggests that theFusarium incarnatum-equisetispecies complex (FIESC), with eight mycoses-associated species, may represent the second most important clade of veterinary relevance withinFusarium. Six of the multilocus STs within the FSSC (3+4-eee, 1-b, 12-a, 12-b, 12-f, and 12-h) and one each within the FIESC (1-a) and theFusarium oxysporumspecies complex (ST-33) were widespread geographically, including three STs with transoceanic disjunctions. In conclusion, fusaria associated with veterinary mycoses are phylogenetically diverse and typically can only be identified to the species level using DNA sequence data from portions of one or more informative genes.

scholarly journals Cercospora cf. flagellaris and Cercospora cf. sigesbeckiae Are Associated with Cercospora Leaf Blight and Purple Seed Stain on Soybean in North America

2016 ◽  
Vol 106 (11) ◽  
pp. 1376-1385 ◽  
Author(s):  
S. Albu ◽  
R. W. Schneider ◽  
P. P. Price ◽  
V. P. Doyle
Keyword(s):  
United States ◽  
Sexual Reproduction ◽  
Mating Type ◽  
Phylogenetic Signal ◽  
Phylogenetic Analyses ◽  
The United States ◽  
Leaf Blight ◽  
Internal Transcribed Spacer Region ◽  
Type Locus ◽  
Purple Seed Stain

Cercospora kikuchii has long been considered the causal agent of Cercospora leaf blight (CLB) and purple seed stain (PSS) on soybean, but a recent study found C. cf. flagellaris associated with CLB and PSS in Arkansas (United States) and Argentina. Here, we provide a broader perspective on the distribution of C. cf. flagellaris on soybean and alternate hosts within the United States (Arkansas, Louisiana, Mississippi, Missouri, and Kansas). We used a multilocus phylogenetic approach with data from actin, calmodulin, translation elongation factor 1-α, histone 3, the internal transcribed spacer region of rDNA and the mating-type locus to determine that two species, C. cf. flagellaris (200 of 205 isolates) and C. cf. sigesbeckiae (five of 205 isolates), are associated with CLB and PSS in the United States. In our phylogenetic analyses, species-level lineages were generally well-supported, though deeper-level evolutionary relationships remained unresolved, indicating that these genes do not possess sufficient phylogenetic signal to resolve the evolutionary history of Cercospora. We also investigated the potential for sexual reproduction in C. cf. flagellaris in Louisiana by determining the frequency of MAT1-1/MAT1-2 mating-type idiomorphs within the Louisiana population of C. cf. flagellaris. Though the MAT 1-2 idiomorph was significantly more common in our collection, the presence of both mating types suggests the potential for sexual reproduction exists.

scholarly journals Evaluation of Pearl Millet Grain Hybrids for Resistance to Meloidogyne spp. and Leaf Blight Caused by Pyricularia grisea

Plant Disease ◽  
2002 ◽  
Vol 86 (8) ◽  
pp. 909-914 ◽  
Author(s):  
P. Timper ◽  
J. P. Wilson ◽  
A. W. Johnson ◽  
W. W. Hanna
Keyword(s):  
United States ◽  
Disease Severity ◽  
Pearl Millet ◽  
Pennisetum Glaucum ◽  
Southeastern United States ◽  
Leaf Blight ◽  
Pyricularia Grisea ◽  
Race 1 ◽  
Grain Crop ◽  
Meloidogyne Spp

Pearl millet, Pennisetum glaucum, has potential as a grain crop in the southeastern United States. Our objectives were to (i) determine the resistance and/or tolerance of pearl millet hybrids to Meloidogyne incognita race 3 and M. arenaria race 1; (ii) compare reproduction of Meloidogyne spp. on pearl millet and corn; and (iii) determine the disease severity of leaf blight caused primarily by Pyricularia grisea. In a field naturally infested with M. incognita, experimental pearl millet hybrids with inbreds 114 and 117 as the pollinators had fewer numbers of second-stage juveniles and more severe leaf blight than did HGM-100, a nematode-susceptible hybrid; hybrids with inbred 115 as the pollinator were similar to HGM-100 in both nematode numbers and foliar disease severity. Grain yields in pearl millet were greater in plots treated with 1,3-dichloropropene than in control plots and were negatively correlated with leaf blight severity. In a greenhouse experiment, both M. incognita and M. arenaria produced fewer eggs on pearl millet hybrids with pollinators 114, 117, 101, 102, and 103 than on hybrid HGM-100. Reproduction of M. incognita was less on the resistant pearl millet hybrids than on corn. Because both M. incognita and P. grisea can reduce grain yield of pearl millet, hybrids developed for the southeastern United States should be resistant to both pathogens.

scholarly journals Development of Pre- and Postharvest Phytophthora Fruit Rot on Watermelons Treated with Fungicides in the Field

2014 ◽  
Vol 15 (3) ◽  
pp. 145-150 ◽  
Author(s):  
Chandrasekar S. Kousik ◽  
Jennifer L. Ikerd ◽  
Howard F. Harrison
Keyword(s):  
United States ◽  
Management Strategy ◽  
Phytophthora Capsici ◽  
Southeastern United States ◽  
Fruit Rot ◽  
Copper Hydroxide ◽  
The Past ◽  
Potassium Phosphite ◽  
Infested Field ◽  
Serious Disease

Fruit rot, caused by Phytophthora capsici, is a serious disease in most watermelon producing regions in the southeastern United States and has caused devastating losses over the past few years. Experiments were conducted from 2010 to 2013 in a P. capsici-infested field to identify fungicides effective for managing pre- and postharvest development of Phytophthora fruit rot. Weekly treatments of OXTP (Oxathiapiprolin), V-10208 (ethaboxam), Zampro (ametoctradin+dimethomorph), Forum (dimethomorph), Prophyt (potassium phosphite) + Kocide 2000 (copper hydroxide), Revus (mandipropamid) rotated with Prophyt + Kocide, and rotations of Revus with Presidio (fluopicolide) and Actigard with Revus significantly reduced preharvest fruit rot in the field compared to nontreated control. Symptomless fruit harvested four days after the last spray was inoculated with P. capsici and maintained in a humid chamber to evaluate postharvest fruit rot development. OXTP, Zampro, Forum, V-10208, Presidio rotated with Revus, and Actigard rotated with Revus applied in the field provided extended postharvest protection compared to nontreated control. Many of these fungicides belonging to different FRAC group should be used in rotations to manage Phytophthora fruit rot of watermelon and should be part of an overall management strategy that also includes use of well drained fields and proper irrigation practices. Accepted 25 August 2014. 29 September 2014.

scholarly journals Three Colletotrichum Species, Including a New Species, are Associated to Leaf Anthracnose of Rubber Tree in Hainan, China

Plant Disease ◽  
2019 ◽  
Vol 103 (1) ◽  
pp. 117-124 ◽  
Author(s):  
Xueren Cao ◽  
Xiangming Xu ◽  
Haiyan Che ◽  
Jonathan S. West ◽  
Daquan Luo
Keyword(s):  
New Species ◽  
Species Complex ◽  
Phylogenetic Analyses ◽  
Rubber Tree ◽  
The Other ◽  
Effective Control ◽  
Anthracnose Disease ◽  
Colletotrichum Species ◽  
Species Complexes ◽  
A New Species

Colletotrichum gloeosporioides and C. acutatum have been reported to be causal agents of anthracnose disease of rubber tree. Recent investigations have shown that both C. gloeosporioides and C. acutatum are species complexes. The identities of Colletotrichum species causing anthracnose disease of rubber tree in Hainan, China, are unknown. In this study, 106 isolates obtained from rubber tree with symptoms of anthracnose were collected from 12 counties of Hainan and identified at the species complex level based on the ITS sequences and colony morphologies. Seventy-four isolates were identified as C. gloeosporioides species complex and the other 32 isolates as C. acutatum species complex. Forty-two isolates were selected for further multilocus phylogenetic analyses in order to identify the isolates to the species level. Twenty-six isolates from the C. gloeosporioides species complex were characterized for partial sequences of seven gene regions (ACT, TUB2, CHS-1, GAPDH, ITS, ApMat, and GS), and the other 16 isolates from the C. acutatum species complex for five gene regions (ACT, TUB2, CHS-1, GAPDH, and ITS). Three species were identified: C. siamense and C. fructicola from the C. gloeosporioides species complex, and a new species C. wanningense from the C. acutatum species complex. Artificial inoculation of rubber tree leaves confirmed the pathogenicity of the three species. The present study improves the understanding of species causing anthracnose on rubber tree and provides useful information for the effective control of the disease.

scholarly journals New endemic Fusarium species hitch-hiking with pathogenic Fusarium strains causing Panama disease in small-holder banana plots in Indonesia

2019 ◽  
Vol 43 (1) ◽  
pp. 48-69 ◽  
Author(s):  
N. Maryani ◽  
M. Sandoval-Denis ◽  
L. Lombard ◽  
P.W. Crous ◽  
G.H.J. Kema
Keyword(s):  
Rna Polymerase Ii ◽  
Fusarium Wilt ◽  
Species Complex ◽  
Plant Pathogens ◽  
Fusarium Species ◽  
Large Subunit ◽  
Fusarium Fujikuroi ◽  
Internal Transcribed Spacer Region ◽  
Species Complexes ◽  
Fusarium Wilt Of Banana

Fusarium species are well known for their abundance, diversity and cosmopolitan life style. Many members of the genus Fusarium are associated with plant hosts, either as plant pathogens, secondary invaders, saprotrophs, and/or endophytes. We previously studied the diversity of Fusarium species in the Fusarium oxysporum species complex (FOSC) associated with Fusarium wilt of banana in Indonesia. In that study, several Fusarium species not belonging to the FOSC were found to be associated with Fusarium wilt of banana. These Fusarium isolates belonged to three Fusarium species complexes, which included the Fusarium fujikuroi species complex (FFSC), Fusarium incarnatum-equiseti species complex (FIESC) and the Fusarium sambucinum species complex (FSSC). Using a multi-gene phylogeny that included partial fragments of the beta-tubulin (tub), calmodulin (cmdA), translation elongation factor 1-alpha (tef1), the internal transcribed spacer region of the rDNA (ITS), the large subunit of the rDNA (LSU), plus the RNA polymerase II large subunit (rpb1) and second largest subunit (rpb2) genes, we were able to identify and characterise several of these as new Fusarium species in the respective species complexes identified in this study.

scholarly journals Endophytic Colletotrichum Species from Aquatic Plants in Southwest China

2022 ◽  
Vol 8 (1) ◽  
pp. 87
Author(s):  
Hua Zheng ◽  
Zefen Yu ◽  
Xinwei Jiang ◽  
Linlin Fang ◽  
Min Qiao
Keyword(s):  
Aquatic Plants ◽  
Species Complex ◽  
Plant Pathogens ◽  
Fruits And Vegetables ◽  
Southwest China ◽  
Phylogenetic Analyses ◽  
Its Region ◽  
Morphological Characterization ◽  
Colletotrichum Species ◽  
Species Complexes

Colletotrichum species are plant pathogens, saprobes, and endophytes in many economically important hosts. Many studies have investigated the diversity and pathogenicity of Colletotrichum species in common ornamentals, fruits, and vegetables. However, Colletotrichum species occurring in aquatic plants are not well known. During the investigation of the diversity of endophytic fungi in aquatic plants in southwest China, 66 Colletotrichum isolates were obtained from aquatic plants there, and 26 of them were selected for sequencing and analyses of actin (ACT), chitin synthase (CHS-1), glyceraldehyde-3-phosphate dehydrogenase (GAPDH), the internal transcribed spacer (ITS) region, and β-tubulin (TUB2) genomic regions. Based on morphological characterization and multi-locus phylogenetic analyses, 13 Colletotrichum species were recognized, namely, C. baiyuense sp. nov., C. casaense sp. nov., C. demersi sp. nov., C. dianense sp. nov., C. fructicola, C. garzense sp. nov., C. jiangxiense, C. karstii, C. philoxeroidis sp. nov., C. spicati sp. nov., C. tengchongense sp. nov., C. vulgaris sp. nov., C. wuxuhaiense sp. nov. Two species complexes, the C. boninense species complex and C. gloeosporioides species complex, were found to be associated with aquatic plants. Pathogenicity tests revealed a broad diversity in pathogenicity and aggressiveness among the eight new Colletotrichum species.

scholarly journals First Report of Flower Anthracnose Caused by Colletotrichum karstii in White Phalaenopsis Orchids in the United States

Plant Disease ◽  
2012 ◽  
Vol 96 (8) ◽  
pp. 1227-1227 ◽  
Author(s):  
I. Jadrane ◽  
M. Kornievsky ◽  
D. E. Desjardin ◽  
Z.-H. He ◽  
L. Cai ◽  
...  
Keyword(s):  
United States ◽  
Species Complex ◽  
The United States ◽  
Likelihood Method ◽  
Conidial Suspension ◽  
Necrotic Tissue ◽  
Internal Transcribed Spacer Region ◽  
First Report ◽  
Whole Plant ◽  
Pure Cultures

In October 2010, a Colletotrichum species was isolated from white Phalaenopsis flowers growing in a greenhouse in San Francisco, CA. This Phalaenopsis is a common commercial orchid hybrid generated mostly likely from Phalaenopsis amabilis and P. aphrodite. The white petals showed anthracnose-like lesions where necrotic tissue is surrounded by a ring of green tissue. The green halo tissues around the necrotic tissue contain functional chloroplasts. One-centimeter disks were cut around the necrotic sites and surface-sterilized with 95% ethanol and 0.6% sodium hypochlorite. The disks were placed on potato dextrose agar (PDA) medium to establish cultures. Pure cultures were obtained by subculturing hyphal tips onto fresh PDA plates. The generated colonies had white aerial mycelia and orange conidial mass. The color of the reverse colony varies between colorless and pale orange. Microscopic observations identified the conidia as cylindrical, straight, and rounded at both ends. In addition, the conidia were approximately 15.0 to 18.0 μm long and 5.0 to 6.5 μm in diameter. These observed morphological features suggested that these isolates possessed the same characteristics as previously described for Colletotrichum karstii, a species considered as part of the C. boninense species complex (1). Four putative independent Colletotrichum isolates were recovered (DED9596, DED9597, DED9598, and DED9599). To confirm the Colletotrichum isolates as the causative pathogen, healthy white Phalaenopsis flowers (five total) in a whole plant were sprayed with a conidial suspension (approximately 1.2 × 106 conidia/ml) of the isolates and incubated at 20°C and 100% relative humidity with cycles of 16 h light and 8 h of darkness. Approximately 1 ml of conidial suspension solution was used for each flower. The plants were watered regularly and flowers were sprayed with sterile double-distilled water daily. As negative controls, five flowers in a whole plant were sprayed with water. Fifteen to twenty days after inoculation, lesions started to form on the petals sprayed with the putative Colletotrichum isolates. All controls remained healthy. The Colletotrichum-inoculated flowers remained alive and did not die as a result of the infection. This same experiment was repeated and the same results were obtained. DNA was extracted from the necrotic regions of the petals infected by the pure cultures of the four isolates and used to sequence the 18S rRNA ITS (internal transcribed spacer) region. All four isolates gave identical ITS sequences. Analysis of the obtained representative sequences (GenBank Accession No. JQ277352) suggested that the isolated pathogen as C. karstii. Using the published ITS data for the C. boninense species complex (1), a phylogenetic tree was generated via the maximum likelihood method. This created tree places the isolates in the same group as C. karstii. This type of C. karstii infection in Phalaenopsis orchid petals was not documented in the U.S. before, although it has been reported in China and Thailand (2). To our knowledge, this is the first report of infection and green island formation caused by C. karstii on orchid flower in the United States. References: (1) Damm et al. Studies in Mycology 73:1, 2012. (2) Yang et al. Cryptogamie Mycologie 32:229, 2011.

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