Conceptual aspects of the quantification of the extent of biological diversity

This paper begins by asking to what extent numbers of species are an adequate measure of biological diversity, either locally or globally; both for evolutionary understanding and for practical applications, biodiversity may often be better quantified at lower or higher levels, from genes to ecosystems. The subsequent discussion, however, focuses on species, and discusses questions that arise in estimating how many species there have ever been, how many there currently are in various taxonomic groups, and how we may quantify the differing degrees of ‘independent evolutionary history’ or ‘taxonomic distinctiveness’ in different species or groups. I conclude with opinions about how the practical task of identifying and recording species diversity might be better managed.

Author(s):  
Ron Vannimwegen ◽  
Diane Debinski

The loss of biological diversity has become a global concern during the last decade (Wilson, 1988; Reid and Miller, 1989). The need to predict those species of concern and areas of high species richness is even more pressing as we enter an era of potential global climate change. Prerequisites to good decision-making with regard to the management of biological diversity are adequate floral and faunal inventories for the lands in question and a rigorous understanding of species-habitat relationships (e.g., Noss, 1983; Davis et al., 1990; Scott et al., 1990; Scott et al., 1993). The emergence of landscape ecology as a discipline has been instrumental in helping scientists understand spatial patterns of species distribution (Noss, 1983; Urban et al., 1987; Turner, 1989). Once these relationships are understood, it may be possible to predict species diversity based upon landscape level habitat analysis using geographic information systems (GIS) and remotely sensed data (Urban et al., 1987; Turner, 1989) at fine-scale resolutions (e.g., 20 - 50 meter sampling sites). Conversely, such analyses can help optimize sampling strategies or allow us to test hypotheses regarding the spatial correspondence of species diversity "hotspots" among taxonomic groups (e.g. Prendergast et al., 1993). The debate over global climate change has created renewed interest in documenting baseline variability in biodiversity. Goals of the Committee on Earth Sciences (1989) regarding the U.S. Global Change Research Program focus on the development of sound scientific strategies for monitoring and predicting environmental change. Key priorities, as noted by the committee, are as follows: "Systematic sampling and monitoring are essential to document critical natural versus human-induced change in the structure and function of globally relevant biological systems on various time scales." (Committee on Earth Sciences, 1989).


2021 ◽  
Vol 168 (6) ◽  
Author(s):  
Ann Bucklin ◽  
Katja T. C. A. Peijnenburg ◽  
Ksenia N. Kosobokova ◽  
Todd D. O’Brien ◽  
Leocadio Blanco-Bercial ◽  
...  

AbstractCharacterization of species diversity of zooplankton is key to understanding, assessing, and predicting the function and future of pelagic ecosystems throughout the global ocean. The marine zooplankton assemblage, including only metazoans, is highly diverse and taxonomically complex, with an estimated ~28,000 species of 41 major taxonomic groups. This review provides a comprehensive summary of DNA sequences for the barcode region of mitochondrial cytochrome oxidase I (COI) for identified specimens. The foundation of this summary is the MetaZooGene Barcode Atlas and Database (MZGdb), a new open-access data and metadata portal that is linked to NCBI GenBank and BOLD data repositories. The MZGdb provides enhanced quality control and tools for assembling COI reference sequence databases that are specific to selected taxonomic groups and/or ocean regions, with associated metadata (e.g., collection georeferencing, verification of species identification, molecular protocols), and tools for statistical analysis, mapping, and visualization. To date, over 150,000 COI sequences for ~ 5600 described species of marine metazoan plankton (including holo- and meroplankton) are available via the MZGdb portal. This review uses the MZGdb as a resource for summaries of COI barcode data and metadata for important taxonomic groups of marine zooplankton and selected regions, including the North Atlantic, Arctic, North Pacific, and Southern Oceans. The MZGdb is designed to provide a foundation for analysis of species diversity of marine zooplankton based on DNA barcoding and metabarcoding for assessment of marine ecosystems and rapid detection of the impacts of climate change.


2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Francisco Javier Sahagún-Sánchez ◽  
José Arturo De-Nova

Abstract: Studies on biological diversity are essential to generate baseline information in natural protected areas. In the present study, we developed a multi-taxonomic inventory in the Sierra del Abra Tanchipa Biosphere Reserve, located northeast of San Luis Potosí, Mexico. Systematic samplings were performed between January 2017 to May 2018, for the taxonomic groups of flora, amphibians, reptiles, birds, and mammals. A total of 3 730 records of 683 species were obtained, corresponding to 427 species of flora, 10 of amphibians, 20 of reptiles, 192 of birds, and 34 of mammals, from which 47 species are threatened. The results obtained represent the critical biodiversity that can be found in this natural protected area. The information will be useful for decision-making on the management and conservation of biodiversity in the Sierra Madre Oriental’s ecological corridor.


2017 ◽  
Author(s):  
Andrea Ravignani ◽  
Sonja Kotz

Increasing empirical research shows a deep connection between timing processes and neural processing of social information. An integrative theoretical framework for prospective studies in humans was recently proposed, linking timing to sociality. A similar framework guiding research in non-human animals is desirable, ideally encompassing as many taxonomic groups and sensory modalities as possible in order to embrace the diversity of social and timing behaviour across species. Here we expand on a previous theoretical account, introducing this debate to animal behaviour. We suggest adopting an evolutionary perspective on social timing in animals: i.e. a comparative approach to probe the link between temporal and social behaviour across a broad range of animal species. This approach should advance our understanding of animal social timing that is, how social behaviour and timing are mutually affected, and possibly of its evolutionary history in our own lineage. We conclude by identifying outstanding questions and testable hypotheses in animal social timing.


2019 ◽  
Vol 7 ◽  
pp. 949-953
Author(s):  
Elza Makaradze ◽  
Galina Meparishvili ◽  
Natela Varshanidze ◽  
Inga Diasamidze ◽  
Ketevan Dolidze ◽  
...  

Wild plants form the basis of biological resources both for Georgia and the whole world. A strategic task of any country is to preserve the biological diversity of plants. In the territory of Ajara, a large species diversity of plants grows, among which there are rare, endemic and relict plants. In particular, Cyclamen adzharicum. Modern systematics of wild plants in Georgia is based on classical methods of botany. In this regard, it is relevant to conduct genetic studies of species diversity and genetic polymorphism of species and populations using molecular genetic markers, in particular RAPD-PCR methods. The purpose of this study was to identify genetic polymorphism in Cyclamen L species using RAPD methods. As a result of the conducted research the 65 RAPD-markers in length from 150 to 1500 BP have been revealed. The number of the amplified fragments DNA varied depending on the primer from 6 (OPA-2) to 11 (OPB-4). The results of grouping Cyclamen adzharicum and C. coum samples allowed two clusters to be identified. In the first cluster were samples of three populations Cyclamen adzharicum and showed a low stubble in the intra-species variability. Cyclamen coum was attributed to the second cluster. The used primers gave the opportunity to identify polymorphism between the tested types of cyclamen.


Author(s):  
Sergei Volis ◽  
Salit Kark

The study of biodiversity has received wide attention in recent decades. Biodiversity has been defined in various ways (Gaston and Spicer, 1998, Purvis and Hector 2000, and chapters in this volume). Discussion regarding its definitions is dynamic, with shifts between the more traditional emphasis on community structure to emphasis on the higher ecosystem level or the lower population levels (e.g., chapters in this volume, Poiani et al. 2000). One of the definitions, proposed in the United Nations Convention on Biological Diversity held in Rio de Janeiro (1992) is “the diversity within species, between species and of ecosystems.” The within-species component of diversity is further defined as “the frequency and diversity of different genes and/or genomes . . .” (IUCN 1993) as estimated by the genetic and morphological diversity within species. While research and conservation efforts in the past century have focused mainly on the community level, they have recently been extended to include the within-species (Hanski 1989) and the ecosystem levels. The component comprising within-species genetic and morphological diversity is increasingly emphasized as an important element of biodiversity (UN Convention 1992). Recent studies suggest that patterns of genetic diversity significantly influence the viability and persistence of local populations (Frankham 1996, Lacy 1997, Riddle 1996, Vrijenhoek et al. 1985). Revealing geographical patterns of genetic diversity is highly relevant to conservation biology and especially to explicit decision-making procedures allowing systematic rather than opportunistic selection of populations and areas for in situ protection (Pressey et al. 1993). Therefore, studying spatial patterns in within-species diversity may be vital in defining and prioritizing conservation efforts (Brooks et al. 1992). Local populations of a species often differ in the ecological conditions experienced by their members (Brown 1984, Gaston 1990, Lawton et al. 1994). These factors potentially affect population characteristics, structure, and within-population genetic and morphological diversity (Brussard 1984, Lawton 1995, Parsons 1991). The spatial location of a population within a species range may be related to its patterns of diversity (Lesica and Allendorf 1995). Thus, detecting within-species diversity patterns across distributional ranges is important for our understanding of ecological and evolutionary (e.g., speciation) processes (Smith et al. 1997), and for the determination of conservation priorities (Kark 1999).


2020 ◽  
Vol 56 (No. 3) ◽  
pp. 214-225
Author(s):  
Magdalena Dzięgielewska ◽  
Iwona Adamska

In 2016-2018, in north-western Poland, field studies were carried out on the coexistence of various taxonomic groups, such as soil nematodes and fungi, including beneficial species that comprise the environment’s natural resistance to pests in agrocenoses. The research aimed to find a connection between select biotic and abiotic factors in the chosen crops which could have practical applications in plant protection. Entomopathogenic nematodes Steinernema feltiae Filipiev, 1934 and entomopathogenic fungi Cordyceps fumosorosea and Metarhizium anisopliae (Metschn.) Sorokin were found to be present in all studied agrocenoses; however, they showed clear preferences for some types of crops or soil. The research shows that the effectiveness of the biological methods of plant protection depends on the selection of the right biopreparations, which strengthen the local populations of the beneficial organisms present in specific agriculture areas.


Phytotaxa ◽  
2014 ◽  
Vol 184 (2) ◽  
pp. 61 ◽  
Author(s):  
Chih-Chieh Yu ◽  
Kuo-Fang Chung

Berberis sect. Wallichianae are species of evergreen shrubs that in Taiwan are found in subalpine and montane-temperate areas and which have a notoriously controversial taxonomic history. Based on multivariate statistical analyses of morphometric data and an explicitly stated species criterion, the taxonomy of the group in Taiwan and its close relative in Luzon (B. barandana) is revised and their endemicity is evaluated by molecular data. In addition to the six species recognized in the Flora of Taiwan, 2nd ed. (i.e., B. aristatoserrulata, B. brevisepala, B. chingshuiensis, B. kawakamii, B. mingetsensis, and B. tarokoensis), B. hayatana (synonymized under B. mingetsensis) and B. nantoensis (synonymized under B. brevisepala) are reinstated, and three new species (B. pengii, B. ravenii, and B. schaaliae) are described and illustrated. Phylogenetic analyses using three chloroplast DNA sequence regions (rbcL, ycf6-psbM, and psbA-trnH) place all Taiwanese species and B. barandana in a strongly supported clade derived from within the continental Asian species of sect. Wallichianae, indicating their independent evolutionary history and supporting their endemic status.


2017 ◽  
Vol 13 (1) ◽  
pp. 20160828 ◽  
Author(s):  
Barry W. Brook ◽  
John Alroy

Extinction is a key feature of the evolutionary history of life, and assessments of extinction risk are essential for the effective protection of biodiversity. The goal in assembling this special issue of Biology Letters was to highlight problems and questions at the research frontier of extinction biology, with an emphasis on recent developments in the methodology of inferring the patterns and processes of extinction from a background of often noisy and sparse data. In selecting topics, we sought to illustrate how extinction is not simply a self-evident phenomenon, but the subject of a dynamic and quantitatively rigorous field of natural science, with practical applications to conservation.


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