scholarly journals Self-assembly processes in the prebiotic environment

2006 ◽  
Vol 361 (1474) ◽  
pp. 1809-1818 ◽  
Author(s):  
David Deamer ◽  
Sara Singaram ◽  
Sudha Rajamani ◽  
Vladimir Kompanichenko ◽  
Stephen Guggenheim
Keyword(s):  
Origin Of Life ◽  
Organic Compounds ◽  
Self Assembly ◽  
Initial Study ◽  
Aqueous Environment ◽  
Organic Solutes ◽  
Mineral Surfaces ◽  
Molecular Systems ◽  
Intermediate Temperature Range ◽  
The Origin Of Life

An important question guiding research on the origin of life concerns the environmental conditions where molecular systems with the properties of life first appeared on the early Earth. An appropriate site would require liquid water, a source of organic compounds, a source of energy to drive polymerization reactions and a process by which the compounds were sufficiently concentrated to undergo physical and chemical interactions. One such site is a geothermal setting, in which organic compounds interact with mineral surfaces to promote self-assembly and polymerization reactions. Here, we report an initial study of two geothermal sites where mixtures of representative organic solutes (amino acids, nucleobases, a fatty acid and glycerol) and phosphate were mixed with high-temperature water in clay-lined pools. Most of the added organics and phosphate were removed from solution with half-times measured in minutes to a few hours. Analysis of the clay, primarily smectite and kaolin, showed that the organics were adsorbed to the mineral surfaces at the acidic pH of the pools, but could subsequently be released in basic solutions. These results help to constrain the range of possible environments for the origin of life. A site conducive to self-assembly of organic solutes would be an aqueous environment relatively low in ionic solutes, at an intermediate temperature range and neutral pH ranges, in which cyclic concentration of the solutes can occur by transient dry intervals.

The Tempo and mode(S) of Prebiotic Evolution

1997 ◽  
Vol 161 ◽  
pp. 419-429 ◽  
Author(s):  
Antonio Lazcano
Keyword(s):  
Origin Of Life ◽  
Organic Compounds ◽  
Biological Evolution ◽  
Current Evidence ◽  
Early Diversification ◽  
Time Period ◽  
The Galaxy ◽  
History Of ◽  
Widespread Phenomenon ◽  
The Origin Of Life

AbstractDifferent current ideas on the origin of life are critically examined. Comparison of the now fashionable FeS/H2S pyrite-based autotrophic theory of the origin of life with the heterotrophic viewpoint suggest that the later is still the most fertile explanation for the emergence of life. However, the theory of chemical evolution and heterotrophic origins of life requires major updating, which should include the abandonment of the idea that the appearance of life was a slow process involving billions of years. Stability of organic compounds and the genetics of bacteria suggest that the origin and early diversification of life took place in a time period of the order of 10 million years. Current evidence suggest that the abiotic synthesis of organic compounds may be a widespread phenomenon in the Galaxy and may have a deterministic nature. However, the history of the biosphere does not exhibits any obvious trend towards greater complexity or «higher» forms of life. Therefore, the role of contingency in biological evolution should not be understimated in the discussions of the possibilities of life in the Universe.

How Did It All Begin?: The Self-Assembly of Organic Molecules and the Origin of Cellular Life

2002 ◽  
Vol 11 ◽  
pp. 179-194
Author(s):  
David W. Deamer
Keyword(s):  
Origin Of Life ◽  
20Th Century ◽  
Self Assembly ◽  
Organic Molecules ◽  
Western Culture ◽  
The Self ◽  
Late 20Th Century ◽  
Cellular Life ◽  
The Earth ◽  
The Origin Of Life

Movies are the myths of late-20th century western culture. Because of the power of films likeETto capture our imagination, we are more likely than past generations to accept the possibility that life exists elsewhere in our galaxy. Such a myth can be used to sketch the main themes of this chapter, which concern the origin of life on the Earth.

scholarly journals An optimal degree of physical and chemical heterogeneity for the origin of life?

2011 ◽  
Vol 366 (1580) ◽  
pp. 2894-2901 ◽  
Author(s):  
Jack W. Szostak
Keyword(s):  
Nucleic Acid ◽  
Origin Of Life ◽  
Self Assembly ◽  
Building Blocks ◽  
Reaction Products ◽  
Amphiphilic Molecules ◽  
Essential Components ◽  
The Origin Of Life ◽  
Chemical Inputs ◽  
Physical And Chemical

The accumulation of pure, concentrated chemical building blocks, from which the essential components of protocells could be assembled, has long been viewed as a necessary, but extremely difficult step on the pathway to the origin of life. However, recent experiments have shown that moderately increasing the complexity of a set of chemical inputs can in some cases lead to a dramatic simplification of the resulting reaction products. Similarly, model protocell membranes composed of certain mixtures of amphiphilic molecules have superior physical properties than membranes composed of single amphiphiles. Moreover, membrane self-assembly under simple and natural conditions gives rise to heterogeneous mixtures of large multi-lamellar vesicles, which are predisposed to a robust pathway of growth and division that simpler and more homogeneous small unilamellar vesicles cannot undergo. Might a similar relaxation of the constraints on building block purity and homogeneity actually facilitate the difficult process of nucleic acid replication? Several arguments suggest that mixtures of monomers and short oligonucleotides may enable the chemical copying of polynucleotides of sufficient length and sequence complexity to allow for the emergence of the first nucleic acid catalysts. The question of the origin of life may become less daunting once the constraints of overly well-defined laboratory experiments are appropriately relaxed.

Proliferating droplets formed via prebiotic polymerisation: the missing link between chemistry and biology on the origin of life

2020 ◽  
Author(s):  
Muneyuki Matsuo ◽  
Kensuke Kurihara
Keyword(s):  
Phase Separation ◽  
Origin Of Life ◽  
Self Assembly ◽  
Primitive Cell ◽  
Material Development ◽  
Steady Growth ◽  
Prebiotic Molecules ◽  
The Origin Of Life ◽  
Acid Thioesters ◽  
Liquid Liquid Phase Separation

Abstract The hypothesis that prebiotic molecules were transformed into polymers that evolved into proliferating molecular assemblages and eventually a primitive cell was first proposed about a hundred years ago. However, no proliferating model prebiotic system has yet been realised because different conditions are required for polymer generation and self-assembly of polymers. In this study, we identified conditions suitable for concurrent peptide generation and self-assembly, and we showed how a proliferating peptide-based droplet could be created by using synthesised amino acid thioesters as prebiotic monomers. Oligopeptides generated from the monomers spontaneously formed droplets through liquid–liquid phase separation in water. The droplets underwent a steady growth–division cycle by periodic addition of monomers through autocatalytic self-reproduction. Heterogeneous enrichment of RNA and lipids within droplets enabled RNA to protect the droplet from dissolution by lipids. These results provide experimental platforms for origin-of-life research and open up novel directions in peptide-based material development.

scholarly journals Self-assembly of tholins in environments simulating Titan liquidospheres: implications for formation of primitive coacervates on Titan

2013 ◽  
Vol 12 (4) ◽  
pp. 282-291 ◽  
Author(s):  
Jun Kawai ◽  
Seema Jagota ◽  
Takeo Kaneko ◽  
Yumiko Obayashi ◽  
Yoshitaka Yoshimura ◽  
...  
Keyword(s):  
Organic Compounds ◽  
Self Assembly ◽  
Aqueous Ammonia ◽  
Aqueous Environment ◽  
Plasma Discharges ◽  
Atmospheric Gases ◽  
Polar Solvents ◽  
Average Temperature ◽  
Magnetosphere Of Saturn ◽  
Complex Organic

AbstractTitan, the largest satellite of Saturn, has a thick atmosphere containing nitrogen and methane. A variety of organic compounds have been detected in the atmosphere, most likely produced when atmospheric gases are exposed to ultraviolet light, electrons captured by the magnetosphere of Saturn and cosmic rays. The Cassini/Huygens probe showed that the average temperature on the surface of Titan is 93.7 K, with lakes of liquid ethane and methane. Sub-surface mixtures of liquid ammonia and water may also be present. We have synthesized complex organic compounds (tholins) by exposing a mixture of nitrogen and methane to plasma discharges, and investigated their interactions with several different liquids that simulate Titan's liquidosphere. We found that coacervates formed when tholins were extracted in non-polar solvents followed by exposure to aqueous ammonia solutions. The results suggest that coacervates can self-assemble in Titan's liquidosphere which have the potential to undergo further chemical evolution. Similar processes are likely to occur in the early evolution of habitable planets when tholin-like compounds undergo phase separation into microscopic structures dispersed in a suitable aqueous environment.

The role of mineral surfaces in the origin of life

1977 ◽  
Vol 8 (1) ◽  
pp. 25-31 ◽  
Author(s):  
V. A. Otroshchenko ◽  
N. V. Vasilyeva
Keyword(s):  
Origin Of Life ◽  
Mineral Surfaces ◽  
The Origin Of Life

A biointerface effect on the self-assembly of ribonucleic acids: a possible mechanism of RNA polymerisation in the self-replication cycle

Nanoscale ◽  
2020 ◽  
Vol 12 (12) ◽  
pp. 6691-6698 ◽  
Author(s):  
Noriyoshi Arai ◽  
Yusei Kobayashi ◽  
Kenji Yasuoka
Keyword(s):  
Cell Membrane ◽  
Origin Of Life ◽  
Self Assembly ◽  
Replication Cycle ◽  
The Self ◽  
Primitive Earth ◽  
Ribonucleic Acids ◽  
Bulk System ◽  
The Origin Of Life ◽  
Self Replication

The self-assembly was found to be more favoured in a vesicle-cell membrane, rather than in the bulk system. The result will contribute to a better understanding of the origin of life on the primitive Earth.

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