scholarly journals Time-of-day effects in resting-state fMRI: changes in Effective Connectivity and BOLD signal

Author(s):  
Liucija Vaisvilaite ◽  
Vetle Hushagen ◽  
Janne Gronli ◽  
Karsten Specht

The current project explored the hypothesis that time-of-day dependent metabolic variations may contribute to reduced reliability in resting-state fMRI studies. We have investigated time-of-day effects in the spontaneous fluctuations (>0.1Hz) of the blood oxygenation level dependent (BOLD) signal. Using data from the human connectome project (HCP) release S1200, cross-spectral density dynamic causal modelling (DCM) was used to analyze time-dependent effects on the hemodynamic response and effective connectivity parameters. Hierarchical group-parametric empirical Bayes (PEB) found no support for changes in effective connectivity, whereas the hemodynamic parameters exhibited a significant time-of-day dependent effect. We conclude that these findings urge the need to account for the time of data acquisition in future MRI studies.

2021 ◽  
Author(s):  
Liucija Vaisvilaite ◽  
Vetle Hushagen ◽  
Janne Grønli ◽  
Karsten Sprecht

2020 ◽  
Vol 46 (Supplement_1) ◽  
pp. S5-S5
Author(s):  
Victoria Okuneye ◽  
Brett Clementz ◽  
Elliot Gershon ◽  
Matcheri Keshavan ◽  
Jennifer E McDowell ◽  
...  

Abstract Background Delusions, false beliefs held in the face of disconfirming evidence, are a prevalent and highly distressing feature of psychotic disorders. The neurobiology of delusions remains unknown but recent evidence suggests a role for abnormal prediction error neural signaling. Prediction error is neurocognitive process in which the brain signals the need to update beliefs when presented with information that disconfirms expectations. Task based neuroimaging studies have identified delusional beliefs correlate with altered activation in frontal and subcortical brain regions during prediction error, though such work is limited in scope. In a large sample of transdiagnostic psychotic patients we modeled the resting state effective connectivity of the delusion-associated predication error (D-PE) circuit. Methods Resting state fMRI was obtained from 289 psychotic subjects (schizophrenia, schizoaffective disorder, bipolar disorder with psychotic features) and 219 healthy controls, recruited as part of the multisite Bipolar & Schizophrenia Network on Intermediate Phenotypes (BSNIP1) study. Neuroimaging data were processed using CONN software with strict quality control criteria. Five D-PE regions of interest (ROIs) were created based on peak coordinates from published task-based prediction error fMRI studies: right Dorsolateral Prefrontal Cortex [r DLPFC], r Ventrolateral Prefrontal Cortex [r VLPFC], r Caudate, l Caudate and l Midbrain. In each subject the first eigenvariate was extracted from the rs-fMRI timeseries of each D-PE ROI. Spectral Dynamic Causal Modeling (spDCM) was performed on a fully connected model of the 5 ROIs. Parameters for the full model were fit using Parameter Empirical Bayes (PEB) and then passed to the group level where they were reduced using Bayesian Model Averaging (BMA). The association of effective connectivity with current delusional severity was tested using PEB-BMA controlling for antipsychotic medication, sex, age and scanner site. Significant effective connectivity was identified as parameters with free energy evidence greater than 95% probability. Additionally, we assessed the effective connectivity differences of this circuit between psychotic probands and healthy controls. Results Greater delusional severity was significantly associated with inhibition of the r Caudate by the r VLPFC, excitation of the r DLPFC by the l Caudate, and decreased self-inhibition of the r VLPFC and r DLPFC. Effective connectivity of the D-PE network in psychotic probands compared to healthy controls was associated with inhibition of the r Caudate by the r VLPFC, the r DLPFC by the l Midbrain, the l Midbrain by the r Caudate, and decreased self-inhibition of the r Caudate, r VLPFC, and r DLPFC. Discussion We found that resting state effective connectivity of the prediction error circuit is disrupted in psychotic subjects experiencing delusions. Specifically, delusion severity was associated with both increased bottom-up and decreased top-down frontostriatal connectivity along with greater disinhibition of the r VLPFC and r DLPFC. These effective connectivity results provide novel insight into the causal paths which may underlie delusion neural circuitry. This provides further evidence that dysconnectivity of prediction error system is a biomarker of delusions in psychosis. Furthermore, these transdiagnostic results implicate frontostriatal dysconnectivity as common neuropathology in delusions.


2020 ◽  
Author(s):  
Obada Al Zoubi ◽  
Masaya Misaki ◽  
Aki Tsuchiyagaito ◽  
Vadim Zotev ◽  
Evan White ◽  
...  

AbstractSex is an important biological variable often used in analyzing and describing the functional organization of the brain during cognitive and behavioral tasks. Several prior studies have shown that blood-oxygen-level-dependent (BOLD) functional MRI (fMRI) functional connectivity (FC) can be used to differentiate sex among individuals. Herein, we demonstrate that sex can be further classified with high accuracy using the intrinsic BOLD signal fluctuations from resting-state fMRI (rs-fMRI). We adopted the amplitude of low-frequency fluctuation (ALFF), and the fraction of ALFF (fALFF) features from the automated anatomical atlas (AAL) and Power’s functional atlas as an input to different machine learning (ML) methods. Using datasets from five independently acquired subject cohorts and with eight fMRI scanning sessions, we comprehensively assessed unbiased performance using nested-cross validation for within-sample and across sample accuracies. The results demonstrated high prediction accuracies for the Human Connectome Project (HCP) dataset (area under cure (AUC) > 0.89). The yielded accuracies suggest that sex difference is embodied and well-pronounced in the low-frequency BOLD signal fluctuation. The performance degrades with the heterogeneity of the cohort and suggests that other factors,.e.g. psychiatric disorders and demographics influences the BOLD signal and may interact with the classification of sex. In addition, the results revealed high learning generalizability with the HCP scan, but not across different datasets. The intraclass correlation coefficient (ICC) across HCP scans showed moderate-to-good reliability based on atlas selection (ICC = 0.65 [0.63-0.67] and ICC= 0.78 [0.76-0.80].). We also assessed the effect of scan duration on the predictability of sex and showed that sex differences could be detected even with a short rs-fMRI scan (e.g., 2 minutes). Moreover, we provided statistical maps of the brain regions differentially recruited by or predicting sex using Shapely values and determined an overlap with previous reports of brain response due to sex differences. Altogether, our analysis suggests that sex differences are well-pronounced in rs-fMRI and should be considered seriously in any study design, analysis, or interpretation.


IRBM ◽  
2021 ◽  
Author(s):  
Z. Wu ◽  
X. Chen ◽  
M. Gao ◽  
M. Hong ◽  
Z. He ◽  
...  

2019 ◽  
Author(s):  
Jianfeng Zhang ◽  
Zirui Huang ◽  
Shankar Tumati ◽  
Georg Northoff

AbstractRecent resting-state fMRI studies have revealed that the global signal (GS) exhibits a non-uniform spatial distribution across the gray matter. Whether this topography is informative remains largely unknown. We therefore tested rest-task modulation of global signal topography by analyzing static global signal correlation and dynamic co-activation patterns in a large sample of fMRI dataset (n=837) from the Human Connectome Project. The GS topography in the resting-state and in seven different tasks was first measured by correlating the global signal with the local timeseries (GSCORR). In the resting state, high GSCORR was observed mainly in the primary sensory and motor regions, while low GSCORR was seen in the association brain areas. This pattern changed during the seven tasks, with mainly decreased GSCORR in sensorimotor cortex. Importantly, this rest-task modulation of GSCORR could be traced to transient co-activation patterns at the peak period of global signal (GS-peak). By comparing the topography of GSCORR and respiration effects, we observed that the topography of respiration mimicked the topography of global signal in the resting-state whereas both differed during the task states; due to such partial dissociation, we assume that GSCORR could not be equated with a respiration effect. Finally, rest-task modulation of GS topography could not be exclusively explained by other sources of physiological noise. Together, we here demonstrate the informative nature of global signal topography by showing its rest-task modulation, the underlying dynamic co-activation patterns, and its partial dissociation from respiration effects during task states.


2020 ◽  
Author(s):  
Jian Kong ◽  
Yiting Huang ◽  
Jiao Liu ◽  
Siyi Yu ◽  
Ming Cheng ◽  
...  

Abstract Background: This study aims to investigate the resting state functional connectivity (rsFC) changes of the hypothalamus in Fibromyalgia patients and the modulation effect of effective treatments. Methods: Fibromyalgia patients and matched healthy controls (HC’s) were recruited. Resting state fMRI data were collected from fibromyalgia patients before and after a 12-week Tai Chi intervention and once from HC’s. Results: Data analysis showed that fibromyalgia patients displayed significantly decreased medial hypothalamus (MH) rsFC with the thalamus and amygdala when compared to HC’s at baseline. After the intervention, fibromyalgia patients showed increased (normalized) MH rsFC in the thalamus and amygdala. Effective connectivity analysis showed disrupted MH and thalamus interaction in fibromyalgia, which nonetheless could be partially restored by Tai Chi. Conclusions: Elucidating the role of the diencephalon and limbic system in the pathophysiology and development of fibromyalgia may facilitate the development of new treatment methods for this prevalent disorder. Trial registration: Trial registration ClinicalTrials.gov Identifier: NCT02407665. Registered 3 April 2015 - Retrospectively registered, https://clinicaltrials.gov/ct2/show/NCT02407665


2019 ◽  
Author(s):  
Hannes Almgren ◽  
Frederik Van de Steen ◽  
Adeel Razi ◽  
Karl Friston ◽  
Daniele Marinazzo

AbstractThe influence of the global BOLD signal on resting state functional connectivity in fMRI data remains a topic of debate, with little consensus. In this study, we assessed the effects of global signal regression (GSR) on effective connectivity within and between resting-state networks – as estimated with dynamic causal modelling (DCM) for resting state fMRI (rsfMRI). DCM incorporates a forward (generative) model that quantifies the contribution of different types of noise (including global measurement noise), effective connectivity, and (neuro)vascular processes to functional connectivity measurements. DCM analyses were applied to two different designs; namely, longitudinal and cross-sectional designs. In the modelling of longitudinal designs, we included four extensive longitudinal resting state fMRI datasets with a total number of 20 subjects. In the analysis of cross-sectional designs, we used rsfMRI data from 361 subjects from the Human Connectome Project. We hypothesized that (1) GSR would have no discernible impact on effective connectivity estimated with DCM, and (2) GSR would be reflected in the parameters representing global measurement noise. Additionally, we performed comparative analyses of the informative value of data with and without GSR. Our results showed negligible to small effects of GSR on connectivity within small (separately estimated) RSNs. For between-network connectivity, we found two important effects: the effect of GSR on between-network connectivity (averaged over all connections) was negligible to small, while the effect of GSR on individual connections was non-negligible. Contrary to our expectations, we found either no effect (in the longitudinal designs) or a non-specific (cross-sectional design) effect of GSR on parameters representing (global) measurement noise. Data without GSR were found to be more informative than data with GSR; however, in small resting state networks the precision of posterior estimates was greater using data after GSR. In conclusion, GSR is a minor concern in DCM studies; however, individual between-network connections (as opposed to average between-network connectivity) and noise parameters should be interpreted quantitatively with some caution. The Kullback-Leibler divergence of the posterior from the prior, together with the precision of posterior estimates, might offer a useful measure to assess the appropriateness of GSR, when nuancing data features in resting state fMRI.


NeuroImage ◽  
2020 ◽  
Vol 208 ◽  
pp. 116367 ◽  
Author(s):  
Giulia Prando ◽  
Mattia Zorzi ◽  
Alessandra Bertoldo ◽  
Maurizio Corbetta ◽  
Marco Zorzi ◽  
...  

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