scholarly journals Inference of the impact of insertion sequence (IS) elements on bacterial genome diversification through analysis of small-size structural polymorphisms in Escherichia coli O157 genomes

2009 ◽  
Vol 19 (10) ◽  
pp. 1809-1816 ◽  
Author(s):  
T. Ooka ◽  
Y. Ogura ◽  
M. Asadulghani ◽  
M. Ohnishi ◽  
K. Nakayama ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Insertion Sequence ◽  
Bacterial Genome ◽  
Escherichia Coli O157 ◽  
Is Elements ◽  
The Impact

scholarly journals Impact of Vacuum Cooling on Escherichia coli O157:H7 Infiltration into Lettuce Tissue

2008 ◽  
Vol 74 (10) ◽  
pp. 3138-3142 ◽  
Author(s):  
Haiping Li ◽  
Mehrdad Tajkarimi ◽  
Bennie I. Osburn
Keyword(s):  
Escherichia Coli ◽  
Risk Assessment ◽  
Reduction Rate ◽  
Escherichia Coli O157 ◽  
Surface Sterilization ◽  
E Coli ◽  
Green Industry ◽  
Vacuum Cooling ◽  
The Impact

ABSTRACT Vacuum cooling is a common practice in the California leafy green industry. This study addressed the impact of vacuum cooling on the infiltration of Escherichia coli O157:H7 into lettuce as part of the risk assessment responding to the E. coli O157:H7 outbreaks associated with leafy green produce from California. Vacuum cooling significantly increased the infiltration of E. coli O157:H7 into the lettuce tissue (2.65E+06 CFU/g) compared to the nonvacuumed condition (1.98E+05 CFU/g). A stringent surface sterilization and quadruple washing could not eliminate the internalized bacteria from lettuce. It appeared that vacuuming forcibly changed the structure of lettuce tissue such as the stomata, suggesting a possible mechanism of E. coli O157:H7 internalization. Vacuuming also caused a lower reduction rate of E. coli O157:H7 in stored lettuce leaves than that for the nonvacuumed condition.

scholarly journals The Effect Ultrasound and Surfactants on Nanobubbles Efficacy against Listeria innocua and Escherichia coli O157:H7, in Cell Suspension and on Fresh Produce Surfaces

Foods ◽  
2021 ◽  
Vol 10 (9) ◽  
pp. 2154
Author(s):  
Shamil Rafeeq ◽  
Reza Ovissipour
Keyword(s):  
Escherichia Coli ◽  
Cell Suspension ◽  
Sodium Dodecyl ◽  
Listeria Innocua ◽  
Wash Water ◽  
Tween 20 ◽  
Escherichia Coli O157 ◽  
E Coli ◽  
Bacterial Removal ◽  
The Impact

Removing foodborne pathogens from food surfaces and inactivating them in wash water are critical steps for reducing the number of foodborne illnesses. In this study we evaluated the impact of surfactants on enhancing nanobubbles’ efficacy on Escherichia coli O157:H7, and Listeria innocua removal from spinach leaves. We evaluated the synergistic impact of nanobubbles and ultrasound on these two pathogens inactivation in the cell suspension. The results indicated that nanobubbles or ultrasound alone could not significantly reduce bacteria in cell suspension after 15 min. However, a combination of nanobubbles and ultrasonication caused more than 6 log cfu/mL reduction after 15 min, and 7 log cfu/mL reduction after 10 min of L. innocua and E. coli, respectively. Nanobubbles also enhanced bacterial removal from spinach surface in combination with ultrasonication. Nanobubbles with ultrasound removed more than 2 and 4 log cfu/cm2 of L. innocua and E. coli, respectively, while ultrasound alone caused 0.5 and 1 log cfu/cm2 of L. innocua and E. coli reduction, respectively. No reduction was observed in the solutions with PBS and nanobubbles. Adding food-grade surfactants (0.1% Sodium dodecyl sulfate-SDS, and 0.1% Tween 20), did not significantly enhance nanobubbles efficacy on bacterial removal from spinach surface.

Efficacy of Chemical Treatments in Eliminating Salmonella and Escherichia coli O157:H7 on Scarified and Polished Alfalfa Seeds

2001 ◽  
Vol 64 (10) ◽  
pp. 1489-1495 ◽  
Author(s):  
SARAH L. HOLLIDAY ◽  
ALAN J. SCOUTEN ◽  
LARRY R. BEUCHAT
Keyword(s):  
Escherichia Coli ◽  
Chemical Treatment ◽  
Organic Material ◽  
Pathogenic Bacteria ◽  
Escherichia Coli O157 ◽  
E Coli ◽  
Mechanical Abrasion ◽  
Chemical Treatments ◽  
The Impact ◽  
Alfalfa Seeds

Alfalfa seeds are sometimes subjected to a scarification treatment to enhance water uptake, which results in more rapid and uniform germination during sprout production. It has been hypothesized that this mechanical abrasion treatment diminishes the efficacy of chemical treatments used to kill or remove pathogenic bacteria from seeds. A study was done to compare the effectiveness of chlorine (20,000 ppm), H2O2 (8%), Ca(OH)2 (1%), Ca(OH)2 (1%) plus Tween 80 (1%), and Ca(OH)2 (1%) plus Span 20 (1%) treatments in killing Salmonella and Escherichia coli O157:H7 inoculated onto control, scarified, and polished alfalfa seeds obtained from two suppliers. The influence of the presence of organic material in the inoculum carrier on the efficacy of sanitizers was investigated. Overall, treatment with 1% Ca(OH)2 was the most effective in reducing populations of the pathogens. Reduction in populations of pathogens on seeds obtained from supplier 1 indicate that chemical treatments are less efficacious in eliminating the pathogens on scarified seeds compared to control seeds. However, the effectiveness of chemical treatment in removing Salmonella and E. coli O157:H7 from seeds obtained from supplier 2 was not markedly affected by scarification or polishing. The presence of organic material in the inoculum carrier did not have a marked influence on the efficacy of chemicals in reducing populations of test pathogens. Additional lots of control, scarified, and polished alfalfa seeds of additional varieties need to be tested before conclusions can be drawn concerning the impact of mechanical abrasion on the efficacy of chemical treatment in removing or killing Salmonella and E. coli O157:H7.

Ammonia sanitization of blackwater for safe use as fertilizer

2015 ◽  
Vol 71 (5) ◽  
pp. 795-800 ◽  
Author(s):  
Jörgen Fidjeland ◽  
Sven-Erik Svensson ◽  
Björn Vinnerås
Keyword(s):  
Escherichia Coli ◽  
Treatment Time ◽  
Escherichia Coli O157 ◽  
Storage Facility ◽  
Egg Viability ◽  
Pathogen Inactivation ◽  
E Coli ◽  
Available Nutrients ◽  
Manure Slurry ◽  
The Impact

Source-separated blackwater from low-flush toilets contains plant-available nutrients and can be used as a fertilizer. The aim of the study was to evaluate the impact on pathogen inactivation when treating blackwater with urea and/or lime. Blackwater was spiked with Salmonella typhimurium, Escherichia coli O157, Enterococcus faecalis, and Ascaris suum eggs, and treated with urea and/or lime in concentrations up to 0.1% w/w. The bottles were kept in a storage facility (manure slurry tank) for 102 days while monitoring the pathogen concentrations. The treatment time needed to meet the requirement for Salmonella and E. coli reduction could be reduced at least six-fold. The enterococci were more persistent, and only the highest treatment doses had a significantly higher inactivation than the controls. The Ascaris egg viability was only reduced by around 50%, so higher urea/lime doses and/or longer treatment times are required to fulfill the treatment requirements of 3 log10 reductions of parasite eggs.

scholarly journals The impact of the bovine faecal microbiome on Escherichia coli O157:H7 prevalence and enumeration in naturally infected cattle

2017 ◽  
Vol 123 (4) ◽  
pp. 1027-1042 ◽  
Author(s):  
M. Kim ◽  
L.A. Kuehn ◽  
J.L. Bono ◽  
E.D. Berry ◽  
N. Kalchayanand ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Escherichia Coli O157 ◽  
Infected Cattle ◽  
Faecal Microbiome ◽  
The Impact

Escherichia coli O157:H7 Cells Exposed to Lettuce Leaf Lysate in Refrigerated Conditions Exhibit Differential Expression of Selected Virulence and Adhesion-Related Genes with Altered Mammalian Cell Adherence

2016 ◽  
Vol 79 (7) ◽  
pp. 1259-1265 ◽  
Author(s):  
NICOLE M. KENNEDY ◽  
NABANITA MUKHERJEE ◽  
PRATIK BANERJEE
Keyword(s):  
Escherichia Coli ◽  
Shiga Toxin ◽  
Mammalian Cells ◽  
Pathogenic Bacteria ◽  
Cold Shock ◽  
Cold Shock Protein ◽  
Toxin Gene ◽  
Adhesion Assay ◽  
Escherichia Coli O157 ◽  
The Impact

ABSTRACT Contamination by and persistence of pathogenic bacteria in ready-to-eat produce have emerged as significant food safety and public health concerns. Viable produceborne pathogens cope with several stresses (e.g., temperature fluctuations and low-temperature storage) during production and storage of the commodities. In this study, we investigated the impact of transient cold shock on Escherichia coli O157:H7 (EcO157) cells in a produce matrix (romaine lettuce leaf lysate). EcO157 cells were exposed to 25°C for 1 h, 4°C for 1 h, and 4°C for 10 min in lettuce lysate. The expression of selected genes coding for virulence, stress response, and heat and cold shock proteins was quantified by real-time quantitative reverse transcription PCR assay. Treated EcO157 cells adhered to MAC-T mammalian cells were enumerated by in vitro bioassay. Expression of the Shiga toxin 1 gene (stx1a) was upregulated significantly (P < 0.05) upon cold shock treatments, but virulence genes related to EcO157 attachment (eaeA, lpfA, and hcpA) were down-regulated. Two key members of the cold shock regulon, cold shock protein (cspA) and gyrA, were significantly induced (P < 0.05) at the refrigeration temperature (4°C). Significant upregulation of an SOS response gene, recA, was also observed. E. coli heat shock regulon member grpE was induced, but a universal stress protein (uspA) was down-regulated at the refrigeration temperatures in lettuce lysate. The adhesion assay revealed a temperature-dependent reduction in the attachment of cold-shocked EcO157 cells. The results of the current study indicate a reduction in the attachment of cold-shocked EcO157 to epithelial cells and higher levels of Shiga toxin gene expression at the molecular level.

scholarly journals Crucial Role for Insertion Sequence Elements in Lactobacillus helveticus Evolution as Revealed by Interstrain Genomic Comparison

2009 ◽  
Vol 76 (1) ◽  
pp. 212-220 ◽  
Author(s):  
Pawel Kaleta ◽  
John O'Callaghan ◽  
Gerald F. Fitzgerald ◽  
Thomas P. Beresford ◽  
R. Paul Ross
Keyword(s):  
Insertion Sequence ◽  
Bacterial Genome ◽  
Lactobacillus Helveticus ◽  
Open Reading Frames ◽  
Comparative Genome Hybridization ◽  
Genome Plasticity ◽  
Genomic Comparison ◽  
Is Elements ◽  
Accelerated Evolution ◽  
Sequence Elements

ABSTRACT Lactobacillus helveticus is a versatile dairy bacterium found to possess heterogeneous genotypes depending on the ecosystem from which it was isolated. The recently published genome sequence showed the remarkable flexibility of its structure, demonstrated by a substantial level of insertion sequence (IS) element expansion in association with massive gene decay. To assess this diversity and examine the level of genome plasticity within the L. helveticus species, an array-based comparative genome hybridization (aCGH) experiment was designed in which 10 strains were analyzed. The aCGH experiment revealed 16 clusters of open reading frames (ORFs) flanked by IS elements. Four of these ORFs are associated with restriction/modification which may have played a role in accelerated evolution of strains in a commercially intensive ecosystem undoubtedly challenged through successive phage attack. Furthermore, analysis of the IS-flanked clusters demonstrated that the most frequently encountered ISs were also those most abundant in the genome (IS1201, ISL2, ISLhe1, ISLhe2, ISLhe65, and ISLhe63). These findings contribute to the overall viewpoint of the versatile character of IS elements and the role they may play in bacterial genome plasticity.

Economic Impact of an Escherichia coli O157:H7 Outbreak in Japan

2002 ◽  
Vol 65 (1) ◽  
pp. 66-72 ◽  
Author(s):  
KAZUO ABE ◽  
SHIGEKI YAMAMOTO ◽  
KUNIHIRO SHINAGAWA
Keyword(s):  
Escherichia Coli ◽  
Economic Impact ◽  
High Ratio ◽  
Economic Consequences ◽  
Economic Losses ◽  
Escherichia Coli O157 ◽  
Daily Consumption ◽  
Total Cost ◽  
Repair Costs ◽  
The Impact

We estimated the economic impact of an outbreak of foodborne diseases occurring from elementary school lunches in 1996 in which 268 persons in Iwate prefecture, Japan were infected with Escherichia coli O157:H7. This study assessed the impact of direct economic losses and indirect economic consequences due to this outbreak. The economic impact of the outbreak was estimated to be about 82,686,000 yen. The laboratory costs, about 21,204,000 yen, showed the highest ratio of the total cost of this outbreak (about 26%). Also, the cost of foodstuffs that were not purchased during the suspension of the lunch service (about 19%), personnel expenses paid to lunch service employees (about 17%), human illness costs (about 15%), and the repair costs of facilities (about 15%) showed up as a high ratio in the total cost, respectively. Because all patients were children, the productivity losses estimated were low as children were considered as dependants with no income. Instead, we estimated the lost income of the mothers of the children. The source of the contamination could not be identified. Therefore, no food industries suffered any setbacks where certain food items could not be used for daily consumption due to the outbreak.

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