scholarly journals The Genetics and Transcriptional Profiles of the Cellulose Synthase-Like HvCslF Gene Family in Barley

2008 ◽  
Vol 146 (4) ◽  
pp. 1821-1833 ◽  
Author(s):  
Rachel A. Burton ◽  
Stephen A. Jobling ◽  
Andrew J. Harvey ◽  
Neil J. Shirley ◽  
Diane E. Mather ◽  
...  
2019 ◽  
Vol 5 (1) ◽  
pp. 73-84 ◽  
Author(s):  
Alan Little ◽  
Jelle Lahnstein ◽  
David W. Jeffery ◽  
Shi F. Khor ◽  
Julian G. Schwerdt ◽  
...  

2018 ◽  
Author(s):  
Yongkai Li ◽  
Xiaojie Cheng ◽  
Yaqin Fu ◽  
Qinqin Wu ◽  
Yuli Guo ◽  
...  

Cell walls play an important role in the structure and morphology of plants as well as stress response, including various biotic and abiotic stresses. Although the comprehensive analysis of genes involved in cellulose synthase have been performed in model plants, such as Arabidopsis thaliana and rice, information regarding cellulose synthase-like (Csl) genes in maize is extremely limited. In this study, a total of 56 members of Csl gene family were identified in maize genome, which were classified into six subfamilies. Analysis of gene structure and conserved motif indicated functional similarities among the ZmCsl proteins within the same subfamily. Additionally, the 56 ZmCsl genes were dispersed on 10 chromosomes. The expression patterns of ZmCsl genes in different tissues using the transcriptome data revealed that most of ZmCsl genes had a relatively high expression in root and tassel tissues. Moreover, the expression profiles of ZmCsl genes under drought and re-watering indicated that the expression of ZmCsl genes were mainly responsive to early stage of drought stress. The protein-protein interaction network of ZmCsl genes proposed some potential interacted proteins. The data presented a comprehensive survey of Csl gene family in maize. The detailed description of maize Csl genes will be beneficial to understand their structural, functional, and evolutionary features. Importantly, we have described the differential expression profiles of these members across different tissues and under drought. This information will provide an important foundation for studying the roles of these ZmCsl genes in response to biotic and abiotic stresses.


PLoS ONE ◽  
2015 ◽  
Vol 10 (7) ◽  
pp. e0130890 ◽  
Author(s):  
Kelly Houston ◽  
Rachel A. Burton ◽  
Beata Sznajder ◽  
Antoni J. Rafalski ◽  
Kanwarpal S. Dhugga ◽  
...  

Cellulose ◽  
2004 ◽  
Vol 11 (3/4) ◽  
pp. 287-299 ◽  
Author(s):  
Laura Appenzeller ◽  
Monika Doblin ◽  
Roberto Barreiro ◽  
Haiyin Wang ◽  
Xiaomu Niu ◽  
...  

2021 ◽  
Vol 12 ◽  
Author(s):  
Jingping Yuan ◽  
Changwei Shen ◽  
Bihua Chen ◽  
Aimin Shen ◽  
Xinzheng Li

Cucurbita Linn. vegetables have a long history of cultivation and have been cultivated all over the world. With the increasing area of saline–alkali soil, Cucurbita Linn. is affected by salt stress, and calmodulin-binding transcription activator (CAMTA) is known for its important biological functions. Although the CAMTA gene family has been identified in several species, there is no comprehensive analysis on Cucurbita species. In this study, we analyzed the genome of Cucurbita maxima and Cucurbita moschata. Five C. moschata calmodulin-binding transcription activators (CmoCAMTAs) and six C. maxima calmodulin-binding transcription activators (CmaCAMTAs) were identified, and they were divided into three subfamilies (Subfamilies I, II, and III) based on the sequence identity of amino acids. CAMTAs from the same subfamily usually have similar exon–intron distribution and conserved domains (CG-1, TIG, IQ, and Ank_2). Chromosome localization analysis showed that CmoCAMTAs and CmaCAMTAs were unevenly distributed across four and five out of 21 chromosomes, respectively. There were a total of three duplicate gene pairs, and all of which had experienced segmental duplication events. The transcriptional profiles of CmoCAMTAs and CmaCAMTAs in roots, stems, leaves, and fruits showed that these CAMTAs have tissue specificity. Cis-acting elements analysis showed that most of CmoCAMTAs and CmaCAMTAs responded to salt stress. By analyzing the transcriptional profiles of CmoCAMTAs and CmaCAMTAs under salt stress, it was shown that both C. moschata and C. maxima shared similarities against salt tolerance and that it is likely to contribute to the development of these species. Finally, quantitative real-time polymerase chain reaction (qRT-PCR) further demonstrated the key role of CmoCAMTAs and CmaCAMTAs under salt stress. This study provided a theoretical basis for studying the function and mechanism of CAMTAs in Cucurbita Linn.


Sign in / Sign up

Export Citation Format

Share Document