scholarly journals Draft genome of an iconic Red Sea reef fish, the blacktail butterflyfish (Chaetodon austriacus): current status and its characteristics

2016 ◽  
Vol 18 (2) ◽  
pp. 347-355 ◽  
Author(s):  
Joseph D. DiBattista ◽  
Xin Wang ◽  
Pablo Saenz-Agudelo ◽  
Marek J. Piatek ◽  
Manuel Aranda ◽  
...  
2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Vanessa Robitzch ◽  
Victor Molina-Valdivia ◽  
Jaiber J. Solano-Iguaran ◽  
Mauricio F. Landaeta ◽  
Michael L. Berumen

AbstractVery little is known about the ecology and biology of the smallest marine vertebrates, fishes in the genus Schindleria. Even though over half of named Schindleria species have been identified in the Red Sea, the collection of only very few specimens has been documented. Here, we assessed abundance patterns of nearly two thousand Red Sea long dorsal fin (LDF) adults and found evidence for putative seasonal and spatial differences, likely related to differing habitat and environmental conditions. The highest abundances were outside local seasonal temperature extremes and decoupled from peaks of coral reef fish recruitment. We also found evidence for global trends in abundances related to lunar cycles using our Red Sea data and that from a recently published large collection of specimens from the DANA Expedition (1928–1930). The abundance of adult LDF Schindleria in relation to lunar phases differed significantly, with most Schindleria caught outside the full moon, and mostly during the new moon in the Red Sea and the 3rd quarter moon in the DANA collection. We further suggest that the abundances of Schindleria at coral reefs may be related to reproductive cycles and that these cycles may be timed with the moon as back-calculations of hatch dates from otoliths from the Red Sea significantly resulted after the new moon, making Schindleria the fastest-lived coral reef fish with the shortest generation times. Schindleria could be the most numerous coral reef fish in the world, for which we encourage increased research.


Author(s):  
Jean Beguinot

Even when ecological communities are incompletely sampled (which is most frequent in practice, at least for species-rich assemblages including many rare species), it remains possible to retrieve much more information than could be expected first, by applying numerical extrapolation to incomplete field data. Indeed, recently developed procedures of numerical extrapolation of partial samplings now allow to estimate, with fair accuracy, not only the number of the still unrecorded species but, moreover, the distribution of abundances of each of these unrecorded species, thereby making available the full range of the Species Abundance Distribution, despite dealing with incomplete data only. In turn, this allows to address a series of descriptive and functional aspects of the internal organization of species assemblages, which otherwise would have required disposing of truly exhaustive samplings. This approach is applied, here, to the previously reported partial samplings of six neighboring reef-fish communities from Tiran Island, Red Sea, with the goal of better understanding their internal organization in relation to their respective environments. In practice, the numerical completion contributes to avoid erroneous interpretations that would likely stem from considering only the incomplete field data. This point is especially relevant when studying reef-associated communities because accurate understanding of their organization will help guiding and refining at best the protective measures required by these particularly vulnerable communities.


2018 ◽  
Vol 9 ◽  
Author(s):  
Ga-Hee Shin ◽  
Younhee Shin ◽  
Myunghee Jung ◽  
Ji-man Hong ◽  
Sangmin Lee ◽  
...  
Keyword(s):  
Red Sea ◽  

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Guishan Zhang ◽  
Mohamed Fauzi Haroon ◽  
Ruifu Zhang ◽  
Tyas Hikmawan ◽  
Ulrich Stingl

Pseudoalteromonas sp. strain XI10 was isolated from the brine-seawater interface of Erba Deep in the Red Sea, Saudi Arabia. Here, we present the draft genome sequence of strain XI10, a gammaproteobacterium that synthesizes polysaccharides for biofilm formation when grown in liquid culture.


2016 ◽  
Vol 4 (1) ◽  
Author(s):  
Mohamed F. Haroon ◽  
Luke R. Thompson ◽  
Ulrich Stingl

A draft genome of SAR324 bacterium lautmerah10 was assembled from a metagenome of a surface water sample from the Red Sea, Saudi Arabia. The genome is more complete and has a higher G+C content than that of previously sequenced SAR324 representatives. Its genomic information shows a versatile metabolism that confers an advantage to SAR324, which is reflected in its distribution throughout different depths of the marine water column.


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