scholarly journals Evolutionary dynamics of bipartite begomoviruses revealed by complete genome analysis

2021 ◽  
Author(s):  
César A.D. Xavier ◽  
Márcio T. Godinho ◽  
Talita B. Mar ◽  
Camila G. Ferro ◽  
Osvaldo F.L. Sande ◽  
...  
Keyword(s):  
Genome Analysis ◽  
Complete Genome ◽  
Evolutionary Dynamics ◽  
Bipartite Begomoviruses ◽  
Complete Genome Analysis

Complete genome analysis identifies recombinant events and positive selection sites of hepatitis C virus from mainland China during 2010–2019

2021 ◽  
Vol 296 ◽  
pp. 198354
Author(s):  
Mengdi Qi ◽  
Mengmei Yang ◽  
Liangzi Xu ◽  
Chunli Ma ◽  
Pu Huang ◽  
...  
Keyword(s):  
Hepatitis C Virus ◽  
Hepatitis C ◽  
Positive Selection ◽  
Genome Analysis ◽  
Complete Genome ◽  
Mainland China ◽  
Complete Genome Analysis

scholarly journals Natural intertypic and intratypic recombinants of enterovirus 71 from mainland China during 2009–2018: a complete genome analysis

Virus Genes ◽  
2021 ◽  
Author(s):  
Liangzi Xu ◽  
Mengdi Qi ◽  
Chunli Ma ◽  
Mengmei Yang ◽  
Pu Huang ◽  
...  
Keyword(s):  
Genome Analysis ◽  
Complete Genome ◽  
Mainland China ◽  
Enterovirus 71 ◽  
Complete Genome Analysis

Identification and complete genome analysis of kobuvirus in faecal samples of European roller (Coracias garrulus): for the first time in a bird

2014 ◽  
Vol 160 (1) ◽  
pp. 345-351 ◽  
Author(s):  
Péter Pankovics ◽  
Ákos Boros ◽  
Tamás Kiss ◽  
Gábor Reuter
Keyword(s):  
Genome Analysis ◽  
Complete Genome ◽  
Coracias Garrulus ◽  
Faecal Samples ◽  
European Roller ◽  
First Time ◽  
Complete Genome Analysis

scholarly journals Isolation and complete genome analysis of neurotropic dengue virus serotype 3 from the cerebrospinal fluid of an encephalitis patient

2018 ◽  
Vol 12 (1) ◽  
pp. e0006198 ◽  
Author(s):  
Rama Dhenni ◽  
Mulya Rahma Karyanti ◽  
Nina Dwi Putri ◽  
Benediktus Yohan ◽  
Frilasita A. Yudhaputri ◽  
...  
Keyword(s):  
Cerebrospinal Fluid ◽  
Dengue Virus ◽  
Genome Analysis ◽  
Complete Genome ◽  
Virus Serotype ◽  
Complete Genome Analysis

Identification and complete genome analysis of a virus variant or putative new foveavirus associated with apple green crinkle disease

2013 ◽  
Vol 158 (9) ◽  
pp. 1877-1887 ◽  
Author(s):  
D. James ◽  
A. Varga ◽  
G. D. Jesperson ◽  
M. Navratil ◽  
D. Safarova ◽  
...  
Keyword(s):  
Genome Analysis ◽  
Complete Genome ◽  
Virus Variant ◽  
Complete Genome Analysis

Complete genome analysis of the novel Edwardsiella tarda phage vB_EtaM_ET-ABTNL-9

2020 ◽  
Vol 165 (5) ◽  
pp. 1241-1244
Author(s):  
Huijing Cui ◽  
Jiancheng Zhang ◽  
Cong Cong ◽  
Lili Wang ◽  
Xiaoyu Li ◽  
...  
Keyword(s):  
Genome Analysis ◽  
Complete Genome ◽  
Edwardsiella Tarda ◽  
The Novel ◽  
Complete Genome Analysis

scholarly journals Whole-genome analysis reveals the complex evolutionary dynamics of Kenyan G2P[4] human rotavirus strains

2011 ◽  
Vol 92 (9) ◽  
pp. 2201-2208 ◽  
Author(s):  
Souvik Ghosh ◽  
Noriaki Adachi ◽  
Zipporah Gatheru ◽  
James Nyangao ◽  
Dai Yamamoto ◽  
...  
Keyword(s):  
Genome Analysis ◽  
Complete Genome ◽  
Evolutionary Dynamics ◽  
Genomic Analysis ◽  
Whole Genome ◽  
Genome Sequences ◽  
Whole Genome Analysis ◽  
Human Rotavirus ◽  
Genotype Constellation ◽  
Common Causes

Although G2P[4] rotaviruses are common causes of acute childhood diarrhoea in Africa, to date there are no reports on whole genomic analysis of African G2P[4] strains. In this study, the nearly complete genome sequences of two Kenyan G2P[4] strains, AK26 and D205, detected in 1982 and 1989, respectively, were analysed. Strain D205 exhibited a DS-1-like genotype constellation, whilst strain AK26 appeared to be an intergenogroup reassortant with a Wa-like NSP2 genotype on the DS-1-like genotype constellation. The VP2-4, VP6-7, NSP1, NSP3 and NSP5 genes of strain AK26 and the VP2, VP4, VP7 and NSP1–5 genes of strain D205 were closely related to those of the prototype or other human G2P[4] strains. In contrast, their remaining genes were distantly related, and, except for NSP2 of AK26, appeared to originate from or share a common origin with rotavirus genes of artiodactyl (ruminant and camelid) origin. These observations highlight the complex evolutionary dynamics of African G2P[4] rotaviruses.

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