scholarly journals Nonlegumes, Legumes, and Root Nodules Harbor Different Arbuscular Mycorrhizal Fungal Communities

2004 ◽  
Vol 70 (10) ◽  
pp. 6240-6246 ◽  
Author(s):  
Tanja R. Scheublin ◽  
Karyn P. Ridgway ◽  
J. Peter W. Young ◽  
Marcel G. A. van der Heijden
Keyword(s):  
Community Composition ◽  
Plant Species ◽  
Mycorrhizal Fungi ◽  
Direct Sequencing ◽  
Root Nodules ◽  
Arbuscular Mycorrhizal ◽  
Small Subunit ◽  
Sequence Type ◽  
Plant Functional Groups ◽  
Amf Communities

ABSTRACT Legumes are an important plant functional group since they can form a tripartite symbiosis with nitrogen-fixing Rhizobium bacteria and phosphorus-acquiring arbuscular mycorrhizal fungi (AMF). However, not much is known about AMF community composition in legumes and their root nodules. In this study, we analyzed the AMF community composition in the roots of three nonlegumes and in the roots and root nodules of three legumes growing in a natural dune grassland. We amplified a portion of the small-subunit ribosomal DNA and analyzed it by using restriction fragment length polymorphism and direct sequencing. We found differences in AMF communities between legumes and nonlegumes and between legume roots and root nodules. Different plant species also contained different AMF communities, with different AMF diversity. One AMF sequence type was much more abundant in legumes than in nonlegumes (39 and 13%, respectively). Root nodules contained characteristic AMF communities that were different from those in legume roots, even though the communities were similar in nodules from different legume species. One AMF sequence type was found almost exclusively in root nodules. Legumes and root nodules have relatively high nitrogen concentrations and high phosphorus demands. Accordingly, the presence of legume- and nodule-related AMF can be explained by the specific nutritional requirements of legumes or by host-specific interactions among legumes, root nodules, and AMF. In summary, we found that AMF communities vary between plant functional groups (legumes and nonlegumes), between plant species, and between parts of a root system (roots and root nodules).

Root-colonizing and soil-borne communities of arbuscular mycorrhizal fungi in a temperate forest understorey

Botany ◽  
2014 ◽  
Vol 92 (4) ◽  
pp. 277-285 ◽  
Author(s):  
Ülle Saks ◽  
John Davison ◽  
Maarja Öpik ◽  
Martti Vasar ◽  
Mari Moora ◽  
...  
Keyword(s):  
Plant Species ◽  
Mycorrhizal Fungi ◽  
Plant Root ◽  
Arbuscular Mycorrhizal ◽  
Small Subunit ◽  
Plant Roots ◽  
Individual Plant ◽  
Amf Communities ◽  
Arbuscular Mycorrhizal Fungal ◽  
Phylogenetic Dispersion

We analyzed arbuscular mycorrhizal fungal (AMF) communities in plant root samples from a natural forest ecosystem — a primeval forest in Järvselja, Estonia. AMF small-subunit (SSU) ribosomal RNA genes were subjected to 454-pyrosequencing and BLAST-based taxonomic identification. Seventy-six AMF sequence groups (virtual taxa, VT) were identified from plant roots. Taken together with seven additional VT recorded in an earlier investigation of soil AMF communities at the site, this represents the highest number of AMF reported from a single ecosystem to date. The six study plant species hosted similar AMF communities. However, AMF community composition in plant roots was significantly different from that in soil and considerably more VT were retrieved from roots than from soil. AMF VT identified from plant roots as a whole and from individual plant species were frequently phylogenetically clustered compared with local and global taxon pools, suggesting that nonrandom assembly processes, notably habitat filtering, may have shaped fungal assemblages. In contrast, the phylogenetic dispersion of AMF communities in soil did not differ from random subsets of the local or global taxon pools.

scholarly journals Precipitation shapes communities of arbuscular mycorrhizal fungi in Tibetan alpine steppe

2016 ◽  
Vol 6 (1) ◽  
Author(s):  
Jing Zhang ◽  
Fang Wang ◽  
Rongxiao Che ◽  
Ping Wang ◽  
Hanke Liu ◽  
...  
Keyword(s):  
Arbuscular Mycorrhizal Fungi ◽  
Community Composition ◽  
Plant Species ◽  
Mycorrhizal Fungi ◽  
Environmental Changes ◽  
Regional Scale ◽  
Arbuscular Mycorrhizal ◽  
Future Climate Change ◽  
Alpine Steppe ◽  
Amf Communities

Abstract Tibetan Plateau is one of the largest and most unique habitats for organisms including arbuscular mycorrhizal fungi (AMF). However, it remains unclear how AMF communities respond to key environmental changes in this harsh environment. To test if precipitation could be a driving force in shaping AMF community structures at regional scale, we examined AMF communities associated with dominant plant species along a precipitation gradient in Tibetan alpine steppe. Rhizosphere soils were collected from five sites with annual precipitation decreasing from 400 to 50 mm. A total of 31 AMF operational taxonomic units (OTUs) were identified. AMF community composition varied significantly among sites, whereas AMF community composition did not vary among plant species. Path analysis revealed that precipitation directly affected AMF hyphal length density, and indirectly influenced AMF species richness likely through the mediation of plant coverage. Our results suggested that water availability could drive the changes of AMF communities at regional scale. Given the important roles AMF could play in the dynamics of plant communities, exploring the changes of AMF communities along key environmental gradients would help us better predict the ecosystem level responses of the Tibetan vegetation to future climate change.

scholarly journals Diverse and abundant arbuscular mycorrhizal fungi in ecological floating beds used to treat eutrophic water

2021 ◽  
Author(s):  
Zhouying Xu ◽  
Yichao Lv ◽  
Yinghe Jiang ◽  
Xiaodong Luo ◽  
Xuelin Gui ◽  
...  
Keyword(s):  
Arbuscular Mycorrhizal Fungi ◽  
Community Composition ◽  
Plant Species ◽  
Mycorrhizal Fungi ◽  
Aquatic Ecosystems ◽  
Species Abundance ◽  
Arbuscular Mycorrhizal ◽  
Eutrophic Lakes ◽  
Amf Diversity ◽  
Amf Communities

Abstract An increasing number of investigations have demonstrated the universal existence of arbuscular mycorrhizal fungi (AMF) in aquatic ecosystems. However, little is known about the accurate distribution and functions of AMF inhabiting aquatic ecosystems, especially ecological floating bed (EFB) which was constructed for the remediation of polluted waterbodies.In this study, we collected root samples of Canna generalis, Cyperus alternifolius and Eichhornia crassipes from three EFBs floating on two eutrophic lakes in Wuhan, China, to investigate the resources and distribution of AMF in EFBs using Illumina Mi-seq technology. A total of 229 operational taxonomic units (OTUs) and 21 taxon from 348,799 Glomeromycota sequences were detected. Glomus was the most dominant AMF in the three EFBs while the second dominant AMF was related to Acaulospora. Different aquatic plant species exhibited varying degrees of AMF colonization (3.83%~71%), diversity (6~103 OTUs, 3~15 virtual taxa) and abundance (14~57551 sequences). Low AMF abundance but relatively high AMF diversity were found in C. alternifolius which is usually considered as non-mycorrhizal, demonstrating the high accuracy of Illumina sequencing. In addition, results from this study suggested a lognormal species abundance distribution was observed across AMF taxa in the three plant species, and the AMF community composition was closely related to pH, nitrogen and phosphorus.Overall, our data demonstrated that diverse and abundant AMF communities were living in EFBs, and the AMF community composition was closely related to the water quality of eutrophic lakes treated by EFBs, providing potential possibility for the applications of AMF in plant-based bioremediation of wastewater.

scholarly journals Cooccurring Gentiana verna and Gentiana acaulis and Their Neighboring Plants in Two Swiss Upper Montane Meadows Harbor Distinct Arbuscular Mycorrhizal Fungal Communities

2007 ◽  
Vol 73 (17) ◽  
pp. 5426-5434 ◽  
Author(s):  
Zuzana Sýkorová ◽  
Andres Wiemken ◽  
Dirk Redecker
Keyword(s):  
Host Plant ◽  
Community Composition ◽  
Plant Species ◽  
Mycorrhizal Fungi ◽  
Host Preference ◽  
Arbuscular Mycorrhizal ◽  
Major Influence ◽  
Host Plant Species ◽  
Amf Communities ◽  
The Impact

ABSTRACT The community composition of arbuscular mycorrhizal fungi (AMF) was analyzed in roots of Gentiana verna, Gentiana acaulis, and accompanying plant species from two species-rich Swiss alpine meadows located in the same area. The aim of the study was to elucidate the impact of host preference or host specificity on the AMF community in the roots. The roots were analyzed by nested PCR, restriction fragment length polymorphism screening, and sequencing of ribosomal DNA small-subunit and internal transcribed spacer regions. The AMF sequences were analyzed phylogenetically and used to define monophyletic sequence types. The AMF community composition was strongly influenced by the host plant species, but compositions did not significantly differ between the two sites. Detailed analyses of the two cooccurring gentian species G. verna and G. acaulis, as well as of neighboring Trifolium spp., revealed that their AMF communities differed significantly. All three host plant taxa harbored AMF communities comprising multiple phylotypes from different fungal lineages. A frequent fungal phylotype from Glomus group B was almost exclusively found in Trifolium spp., suggesting some degree of host preference for this fungus in this habitat. In conclusion, the results indicate that within a relatively small area with similar soil and climatic conditions, the host plant species can have a major influence on the AMF communities within the roots. No evidence was found for a narrowing of the mycosymbiont spectrum in the two green gentians, in contrast to previous findings with their achlorophyllous relatives.

scholarly journals Seasonal Dynamics of Arbuscular Mycorrhizal Fungal Communities in Roots in a Seminatural Grassland

2007 ◽  
Vol 73 (17) ◽  
pp. 5613-5623 ◽  
Author(s):  
Juan C. Santos-González ◽  
Roger D. Finlay ◽  
Anders Tehler
Keyword(s):  
Plant Species ◽  
Mycorrhizal Fungi ◽  
Arbuscular Mycorrhizal ◽  
Small Subunit ◽  
Rrna Genes ◽  
Small Subunit Rrna ◽  
Prunella Vulgaris ◽  
Pcr Cloning ◽  
Amf Communities ◽  
Arbuscular Mycorrhizal Fungal

ABSTRACT Symbiotic arbuscular mycorrhizal fungi (AMF) have been shown to influence both the diversity and productivity of grassland plant communities. These effects have been postulated to depend on the differential effects of individual mycorrhizal taxa on different plant species; however, so far there are few detailed studies of the dynamics of AMF colonization of different plant species. In this study, we characterized the communities of AMF colonizing the roots of two plant species, Prunella vulgaris and Antennaria dioica, in a Swedish seminatural grassland at different times of the year. The AMF small subunit rRNA genes were subjected to PCR, cloning, sequencing, and phylogenetic analysis. Nineteen discrete sequence types belonging to Glomus groups A and B and to the genus Acaulospora were distinguished. No significant seasonal changes in the species compositions of the AMF communities as a whole were observed. However, the two plant species hosted significantly different AMF communities. P. vulgaris hosted a rich AMF community throughout the entire growing season. The presence of AMF in A. dioica decreased dramatically in autumn, while an increased presence of Ascomycetes species was detected.

scholarly journals The Efficiency of Arbuscular Mycorrhizal Fungi in Promoting Alfalfa Growth in Acid Soils

2017 ◽  
Vol 9 (4) ◽  
pp. 186 ◽  
Author(s):  
Lei Huang ◽  
Yuji He ◽  
Yanjun Guo
Keyword(s):  
Arbuscular Mycorrhizal Fungi ◽  
Plant Species ◽  
Mycorrhizal Fungi ◽  
Root Nodules ◽  
Acid Soil ◽  
Acid Soils ◽  
Arbuscular Mycorrhizal ◽  
Root Weight ◽  
Dual Inoculation ◽  
Amf Inoculation

High concentrations of soil Al3+ in acid soil severely influence the growth of Medicago sativa (alfalfa). The objective of the current study was to analyze whether Arbuscular Mycorrhizal Fungi (AMF) inoculation could improve alfalfa growth in acid soils. A two-way completely randomized factorial design was employed for M. sativa and M. lupulina (black medick) with two inoculations (rhizobia and AMF) and three Al3+ levels, and replicated four times. The soil Al3+ levels were adjusted to 900 mg/kg, 1000 mg/kg and 1100 mg/kg. Spores of AMF were isolated directly from rhizosphere soils of black medick. The rhizobia were isolated from root nodules in fields separately from two plant species. At each Al3+ level, there were four inoculations, non-inoculation, AMF solely, rhizobia solely and dual-inoculation with AMF and rhizobia. Soil Al3+ concentration significantly limited above- and below-ground growth of both alfalfa and black medick, reducing plant height, branching number, shoot and root weight, and root length, surface area and volume. Compared to rhizobia, AMF showed a higher tolerance to soil Al3+. AMF inoculation increased the shoot and root weight of both plant species under most circumstances. Overall, AMF colonization had a trend in increasing the contents of phosphorus in both plant species at all Al3+ concentrations but not nitrogen and potassium. Dual inoculation significantly increased nodulation ability, enabling both plant species to form nodules at 900 and 1000 mg/kg Al3+. Though the soil Al3+ concentration influenced the efficiency of AMF inoculation, AMF inoculation improved nodulation, increased plant growth and nutrient uptake, suggesting that it was an alternative way in improving alfalfa growth in acid soils.

scholarly journals Plant health status effects on arbuscular mycorrhizal fungi associated with Lavandula angustifolia and Lavandula intermedia infected by Phytoplasma in France

2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Marie- Noëlle Binet ◽  
Camille Marchal ◽  
Justine Lipuma ◽  
Roberto A. Geremia ◽  
Olivier Bagarri ◽  
...  
Keyword(s):  
Health Status ◽  
Arbuscular Mycorrhizal Fungi ◽  
Plant Species ◽  
Mycorrhizal Fungi ◽  
Agricultural Practices ◽  
Arbuscular Mycorrhizal ◽  
Plant Health ◽  
Agricultural Practice ◽  
Lavandula Angustifolia ◽  
Amf Communities

AbstractWe investigated root communities of arbuscular mycorrhizal fungi (AMF) in relation to lavender (Lavandula angustifolia) and lavandin (Lavandula intermedia) health status from organic and conventional fields affected by Phytoplasma infection. The intensity of root mycorrhizal colonization was significantly different between diseased and healthy plants and was higher in the latter regardless of agricultural practice. This difference was more pronounced in lavender. The root AMF diversity was influenced by the plant health status solely in lavender and only under the conventional practice resulting in an increase in the AMF abundance and richness. The plant health status did not influence the distribution of root AMF communities in lavandin unlike its strong impact in lavender in both agricultural practices. Finally, among the most abundant molecular operational taxonomic units (MOTUs), four different MOTUs for each plant species were significantly abundant in the roots of healthy lavender and lavandin in either agricultural practice. Our study demonstrated that the plant health status influences root colonization and can influence the diversity and distribution of root AMF communities. Its effects vary according to plant species, can be modified by agricultural practices and allow plants to establish symbiosis with specific AMF species.

scholarly journals Clary Sage Cultivation and Mycorrhizal Inoculation Influence the Rhizosphere Fungal Community of an Aged Trace-Element Polluted Soil

2021 ◽  
Vol 9 (6) ◽  
pp. 1333
Author(s):  
Robin Raveau ◽  
Anissa Lounès-Hadj Sahraoui ◽  
Mohamed Hijri ◽  
Joël Fontaine
Keyword(s):  
Trace Element ◽  
Community Composition ◽  
Mycorrhizal Fungi ◽  
Arbuscular Mycorrhizal ◽  
Illumina Miseq ◽  
Amplicon Sequencing ◽  
Fungal Communities ◽  
Rhizospheric Soil ◽  
Lead Smelter ◽  
Amf Communities

Soil fungal communities play a central role in natural systems and agroecosystems. As such, they have attracted significant research interest. However, the fungal microbiota of aromatic plants, such as clary sage (Salvia sclarea L.), remain unexplored. This is especially the case in trace element (TE)-polluted conditions and within the framework of phytomanagement approaches. The presence of high concentrations of TEs in soils can negatively affect not only microbial diversity and community composition but also plant establishment and growth. Hence, the objective of this study is to investigate the soil fungal and arbuscular mycorrhizal fungi (AMF) community composition and their changes over time in TE-polluted soils in the vicinity of a former lead smelter and under the cultivation of clary sage. We used Illumina MiSeq amplicon sequencing to evaluate the effects of in situ clary sage cultivation over two successive years, combined or not with exogenous AMF inoculation, on the rhizospheric soil and root fungal communities. We obtained 1239 and 569 fungal amplicon sequence variants (ASV), respectively, in the rhizospheric soil and roots of S. sclarea under TE-polluted conditions. Remarkably, 69 AMF species were detected at our experimental site, belonging to 12 AMF genera. Furthermore, the inoculation treatment significantly shaped the fungal communities in soil and increased the number of AMF ASVs in clary sage roots. In addition, clary sage cultivation over successive years could be one of the explanatory parameters for the inter-annual variation in both fungal and AMF communities in the soil and root biotopes. Our data provide new insights on fungal and AMF communities in the rhizospheric soil and roots of an aromatic plant, clary sage, grown in TE-polluted agricultural soil.

scholarly journals Integrating plant species contribution to mycorrhizal and seed dispersal mutualistic networks

2019 ◽  
Vol 15 (5) ◽  
pp. 20180770 ◽  
Author(s):  
Marta Correia ◽  
Susana Rodríguez-Echeverría ◽  
Sérgio Timóteo ◽  
Helena Freitas ◽  
Ruben Heleno
Keyword(s):  
Seed Dispersal ◽  
Plant Species ◽  
Mycorrhizal Fungi ◽  
Arbuscular Mycorrhizal ◽  
Plant Population Dynamics ◽  
Plant Interactions ◽  
Key Drivers ◽  
Seed Dispersers ◽  
Amf Communities ◽  
Common Plant

Mutualistic interactions like those established between plants and mycorrhizal fungi or seed dispersers are key drivers of plant population dynamics and ecosystem functioning; however, these interactions have rarely been explored together. We assembled a tripartite fungi–plant–disperser network in the Gorongosa National Park—Mozambique, to test (1) if diversity and importance of plant mutualists above- and belowground are correlated, and (2) whether biotically and abiotically dispersed plants are associated with distinct arbuscular mycorrhizal fungi (AMF). We quantified seed dispersal by animals for 1 year and characterized the AMF of 26 common plant species. Sixteen plant species were dispersed by 15 animals and colonized by 48 AMF virtual taxa (VT), while the remaining 10 plant species were not dispersed by animals and associated with 34 AMF VT. We found no evidence for a correlation between the number of plant partners above- and belowground or on plant specialization on both types of partners. We also found no evidence for differentiation of AMF communities between biotically and abiotically dispersed plants. Our results suggest that the establishment of plant interactions with seed dispersers and mycorrhizal fungi is largely independent and that both biotically and abiotically dispersed plants seem to associate with similar communities of AMF.

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