scholarly journals Draft Genome Sequence of the Iridescent Marine Bacterium Cellulophaga lytica CECT 8139

2017 ◽  
Vol 5 (36) ◽  
Author(s):  
Maylis Chapelais-Baron ◽  
Isabelle Goubet ◽  
Eric Duchaud ◽  
Eric Rosenfeld
Keyword(s):  
Genome Sequence ◽  
Marine Bacterium ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Physiological Properties

ABSTRACT Some species of the genus Cellulophaga have been reported as having biotechnological interests and noteworthy physiological properties. We report here the draft genome sequence of Cellulophaga lytica CECT 8139, a bacterium that produces an intensely iridescent colony biofilm on agar surfaces.

scholarly journals Draft Genome Sequence of Rubricoccus marinus SG-29T, a Marine Bacterium within the Family Rhodothermaceae, Which Contains Two Different Rhodopsin Genes

2017 ◽  
Vol 5 (38) ◽  
Author(s):  
Yu Nakajima ◽  
Susumu Yoshizawa ◽  
Sanghwa Park ◽  
Yohei Kumagai ◽  
Shu-Kuan Wong ◽  
...  
Keyword(s):  
Genome Sequence ◽  
North Pacific ◽  
Western North Pacific ◽  
Marine Bacterium ◽  
North Pacific Ocean ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
The Family ◽  
Different Types

ABSTRACT Here, we report the draft genome sequence of Rubricoccus marinus SG-29T, a bacterium isolated from the western North Pacific Ocean. R. marinus SG-29T possesses two different types of rhodopsin genes and belongs to the family Rhodothermaceae, with which halophilic, thermophilic, and marine bacteria are associated.

scholarly journals Draft Genome Sequence of the Marine Bacterium Oceanimonas baumannii ATCC 700832T

2017 ◽  
Vol 5 (36) ◽  
Author(s):  
William D. McClelland ◽  
Ariel M. Trachtenberg ◽  
Marc A. Brennan ◽  
Kyle S. MacLea
Keyword(s):  
United Kingdom ◽  
Genome Size ◽  
Genome Sequence ◽  
Marine Bacterium ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Gram Negative ◽  
Content Type

ABSTRACT The aerobic phenol-degrading Gram-negative rod Oceanimonas baumannii ATCC 700832T was first isolated from estuary mud from the River Wear, United Kingdom, in 1983. Information on the draft genome sequence for O. baumannii ATCC 700832T is included in this announcement. The predicted genome size is 3,809,332 bp, with 55.88% G+C content.

scholarly journals Draft Genome Sequence of Mycolicibacterium sp. Strain 018/SC-01/001, Isolated from the Marine Sponge Iotrochota sp.

2019 ◽  
Vol 8 (42) ◽  
Author(s):  
Ji Fa Marshall Ong ◽  
Lik Tong Tan
Keyword(s):  
Genome Sequence ◽  
Marine Sponge ◽  
Marine Bacterium ◽  
Bacterial Genome ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Biosynthetic Pathways ◽  
Bioinformatics Tool ◽  
Content Type ◽  
Singapore Strait

Here, we report the draft genome sequence of a marine bacterium, Mycolicibacterium sp. strain 018/SC-01/001, isolated from the marine sponge Iotrochota sp. collected from the Singapore Strait. The analysis of the bacterial genome using the bioinformatics tool antiSMASH 4.0.2 revealed the presence of a number of unique natural product biosynthetic pathways.

scholarly journals Draft Genome Sequence of the Marine Bacterium Alteromonas sp. Strain KS69

2019 ◽  
Vol 8 (5) ◽  
Author(s):  
Kaitlin J. Schulz ◽  
Brianna E. Arruda ◽  
Adam S. Bitzer ◽  
Mark W. Silby
Keyword(s):  
Pseudomonas Aeruginosa ◽  
Genome Sequence ◽  
Deep Water ◽  
Water Samples ◽  
Marine Bacterium ◽  
Draft Genome ◽  
Narragansett Bay ◽  
Draft Genome Sequence ◽  
Gram Negative ◽  
Content Type

Alteromonas spp. are Gram-negative, aerobic, marine bacteria. Here, we report the draft genome sequence of Alteromonas sp. strain KS69, isolated from Narragansett Bay deep water samples. Unpublished preliminary data suggest that KS69 reduces expression of the 3-oxo-C12-HSL-dependent, virulence-associated gene lasB of Pseudomonas aeruginosa PAO1, suggesting that it produces a quorum sensing inhibitor.

scholarly journals Draft Genome Sequence of the Iridescent Marine Bacterium Tenacibaculum discolor Strain IMLK18

2019 ◽  
Vol 8 (5) ◽  
Author(s):  
H. Lynn Kee ◽  
Irina V. Mikheyeva ◽  
Rebecca L. Mickol ◽  
Scott C. Dawson ◽  
Dianne K. Newman ◽  
...  
Keyword(s):  
Microbial Diversity ◽  
Genome Sequence ◽  
Marine Bacterium ◽  
Draft Genome ◽  
Summer Programs ◽  
Draft Genome Sequence ◽  
Genomic Sequencing ◽  
Marine Biological Laboratory ◽  
Content Type ◽  
Marine Biological

We report here the draft genome sequence of a strain of Tenacibaculum discolor (Bacteroidetes) that was isolated from the river-ocean interface at Trunk River in Falmouth, Massachusetts. The isolation and genomic sequencing were performed during the 2016 and 2018 Microbial Diversity summer programs at the Marine Biological Laboratory in Woods Hole, Massachusetts.

scholarly journals Draft Genome Sequence of Bacillus sp. Strain 007/AIA-02/001, Isolated from the Marine Sponge Coelocarteria singaporensis

2019 ◽  
Vol 8 (35) ◽  
Author(s):  
Ji Fa Marshall Ong ◽  
Hui Chin Goh ◽  
Lik Tong Tan
Keyword(s):  
Genome Sequence ◽  
Marine Sponge ◽  
Marine Bacterium ◽  
Bacterial Genome ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Biosynthetic Pathways ◽  
Bacillus Sp ◽  
Bioinformatics Tool ◽  
Content Type

We report the draft genome sequence of a marine bacterium, Bacillus sp. strain 007/AIA-02/001, isolated from the marine sponge Coelocarteria singaporensis, obtained from water off the coast of Singapore. The analysis of the bacterial genome using the bioinformatics tool antiSMASH 4.0.2 showed the presence of a number of unique natural product biosynthetic pathways.

scholarly journals Draft Genome Sequence of Pseudoalteromonas sp. Strain A25, a Bacterium with Algicidal Activity against Diatoms

2019 ◽  
Vol 8 (45) ◽  
Author(s):  
Hirotaka Kitaguchi ◽  
Nanase Masu ◽  
Keiko Fujii ◽  
Atsushi Mitsutani
Keyword(s):  
Genome Sequence ◽  
Marine Bacterium ◽  
Draft Genome ◽  
Genomic Analysis ◽  
Draft Genome Sequence ◽  
Algicidal Activity ◽  
Content Type

Pseudoalteromonas sp. strain A25 is a marine bacterium that reveals strong algicidal activity against diatoms. We report the draft genome sequence for this strain, which consists of two contigs (3,887,303 bp and 850,536 bp). Further genomic analysis might facilitate an understanding of the algicidal mechanisms of this strain.

scholarly journals Draft Genome Sequence of Marine Actinobacterium Streptomyces spinoverrucosus SNB-032

2021 ◽  
Vol 10 (16) ◽  
Author(s):  
Philipp Schwarzer ◽  
Stephan Flemming ◽  
John B. MacMillan ◽  
Andreas Bechthold
Keyword(s):  
Sequence Analysis ◽  
Secondary Metabolites ◽  
Bioactive Compounds ◽  
Genome Sequence ◽  
Marine Bacterium ◽  
Draft Genome ◽  
Economic Importance ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Large Source

Actinobacteria represent a large source of diverse bioactive compounds of medical and economic importance. Here, we report the 8.8-Mb draft genome of the marine bacterium Streptomyces spinoverrucosus SNB-032. Bioinformatic sequence analysis proved similarities to known Streptomyces strains and revealed the capacity for the production of various secondary metabolites.

scholarly journals Draft Genome Sequence of Urease-Producing Pseudorhodobacter sp. Strain E13, Isolated from the Yellow Sea in Gunsan, South Korea

2019 ◽  
Vol 8 (23) ◽  
Author(s):  
Si Chul Kim ◽  
Hyo Jung Lee
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Yellow Sea ◽  
Draft Genome ◽  
The Yellow Sea ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Gram Negative ◽  
Content Type

Here, we report the draft genome sequence of Pseudorhodobacter sp. strain E13, a Gram-negative, aerobic, nonflagellated, and rod-shaped bacterium which was isolated from the Yellow Sea in South Korea. The assembled genome sequence is 3,878,578 bp long with 3,646 protein-coding sequences in 159 contigs.

scholarly journals Draft Genome Sequence of a Vibrio harveyi Strain Associated with Vibriosis in Pacific White Shrimp (Litopenaeus vannamei)

2017 ◽  
Vol 5 (7) ◽  
Author(s):  
Emille Moreno ◽  
Marci Parks ◽  
Lee J. Pinnell ◽  
James J. Tallman ◽  
Jeffrey W. Turner
Keyword(s):  
Genome Sequence ◽  
Litopenaeus Vannamei ◽  
Vibrio Harveyi ◽  
Draft Genome ◽  
Penaeid Shrimp ◽  
Pacific White Shrimp ◽  
Draft Genome Sequence ◽  
White Shrimp ◽  
Content Type ◽  
Future Studies

ABSTRACT Vibrio harveyi is a Gram-negative bacterium associated with vibriosis in penaeid shrimp. Here, we report the draft genome sequence of a V. harveyi strain isolated from Pacific white shrimp (Litopenaeus vannamei) during a vibriosis outbreak. The availability of this genome will aid future studies of vibriosis in shrimp aquaculture.

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