scholarly journals Complete Genome Sequence of Shewanella sp. WE21, a Rare Isolate with Multiple Novel Large Genomic Islands

2018 ◽  
Vol 6 (16) ◽  
pp. e00277-18 ◽  
Author(s):  
Daniel Castillo ◽  
Lone Gram ◽  
Frank E. Dailey
Keyword(s):  
Fatty Acid ◽  
Gastrointestinal Tract ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Genomic Islands ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Omega 3 ◽  
Content Type ◽  
Omega 3 Fatty Acid

ABSTRACT We present here the whole-genome sequence of Shewanella sp. WE21, an unusual omega-3 fatty acid-producing bacterium isolated from the gastrointestinal tract of the freshwater fish Sander vitreus (walleye). This genome contains a number of unique, large genomic islands with genes not present in other Shewanella bacteria.

scholarly journals Complete Genome Sequence of the Arcobacter skirrowii Type Strain LMG 6621

2018 ◽  
Vol 7 (17) ◽  
Author(s):  
William G. Miller ◽  
Emma Yee
Keyword(s):  
Genome Sequence ◽  
Fecal Sample ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
The United Kingdom ◽  
Veterinary Importance

Arcobacter skirrowii is a species of veterinary importance, originally recovered from the feces, aborted fetuses, and preputial fluids of livestock. We present here the whole-genome sequence of the A. skirrowii type strain LMG 6621 (= 449/80T = CCUG 10374T), isolated in the United Kingdom from a lamb diarrheal fecal sample.

scholarly journals Complete Genome Sequence of Streptococcus oralis SF100, Isolated from Blood Cultures from a Patient with Infective Endocarditis

2021 ◽  
Vol 10 (28) ◽  
Author(s):  
Ji Hee Lee ◽  
Hyun Jung Ji ◽  
Ho Seong Seo ◽  
Paul M. Sullam
Keyword(s):  
Infective Endocarditis ◽  
Animal Models ◽  
Oral Cavity ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Blood Cultures ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Streptococcus Oralis

Streptococcus oralis is a commensal viridans group streptococcus of the human oral cavity and a frequent cause of endovascular infection. Here, we report the complete whole-genome sequence of S. oralis strain SF100, which was originally isolated from the blood of a patient with infective endocarditis. This strain contains the lysogenic bacteriophage SM1, which enhances the virulence of SF100 in animal models of endocardial infection.

scholarly journals Complete Genome Sequence of Lactobacillus reuteri PNW1, a Promising Probiotic Candidate

2019 ◽  
Vol 8 (8) ◽  
Author(s):  
Kazeem A. Alayande ◽  
Olayinka A. Aiyegoro ◽  
Collins N. Ateba
Keyword(s):  
South African ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Lactobacillus Reuteri ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Weaned Piglets ◽  
Content Type

This study reports the whole-genome sequence of Lactobacillus reuteri PNW1 isolated from gastrointestinal tracts of weaned piglets of the indigenous South African Windsnyer pig breed. A total of 5.2 GB data comprising 8,209,104 paired-end reads were generated.

scholarly journals Whole-Genome Sequence of the Cyanobacterium Synechococcus sp. Strain WH 8101

2020 ◽  
Vol 9 (8) ◽  
Author(s):  
Marcia F. Marston ◽  
Shawn W. Polson
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Islands ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Coastal Environments ◽  
Host Interactions ◽  
Synechococcus Sp ◽  
Globally Distributed

Synechococcus spp. are unicellular cyanobacteria that are globally distributed and are important primary producers in marine coastal environments. Here, we report the complete genome sequence of Synechococcus sp. strain WH 8101 and identify genomic islands that may play a role in virus-host interactions.

scholarly journals Whole-Genome Sequence of Rickettsia parkeri Strain Atlantic Rainforest, Isolated from a Colombian Tick

2019 ◽  
Vol 8 (39) ◽  
Author(s):  
Andrés F. Londoño ◽  
Nicole L. Mendell ◽  
Gustavo A. Valbuena ◽  
Andrew L. Routh ◽  
Thomas G. Wood ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Atlantic Rainforest ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Rickettsia Parkeri ◽  
Content Type ◽  
Amblyomma Ovale

Rickettsia parkeri is classified as a member of the alphaproteobacterial microorganisms, genus Rickettsia. Here, we report the complete genome sequence of Rickettsia parkeri strain Atlantic Rainforest, which was isolated from an Amblyomma ovale tick collected in the municipality of Necoclí, Colombia.

scholarly journals Complete Genome Sequence of Streptococcus agalactiae GD201008-001, Isolated in China from Tilapia with Meningoencephalitis

2012 ◽  
Vol 194 (23) ◽  
pp. 6653-6653 ◽  
Author(s):  
Guangjin Liu ◽  
Wei Zhang ◽  
Chengping Lu
Keyword(s):  
Genome Sequence ◽  
Streptococcus Agalactiae ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genetic Basis ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Host Tropism

ABSTRACTThis work describes a whole-genome sequence ofStreptococcus agalactiaestrain GD201008-001, a pathogen causing meningoencephalitis in cultural tilapia in China. The genome sequence provides opportunities to understand the piscine GBS pathogenicity and its genetic basis associated with host tropism.

scholarly journals Whole-Genome Sequence of Corynebacterium pseudotuberculosis PAT10 Strain Isolated from Sheep in Patagonia, Argentina

2011 ◽  
Vol 193 (22) ◽  
pp. 6420-6421 ◽  
Author(s):  
Louise Teixeira Cerdeira ◽  
Anne Cybelle Pinto ◽  
Maria Paula Cruz Schneider ◽  
Sintia Silva de Almeida ◽  
Anderson Rodrigues dos Santos ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genetic Basis ◽  
Lung Abscess ◽  
Corynebacterium Pseudotuberculosis ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type

In this work, we report the complete genome sequence of aCorynebacterium pseudotuberculosisPAT10 isolate, collected from a lung abscess in an Argentine sheep in Patagonia, whose pathogen also required an investigation of its pathogenesis. Thus, the analysis of the genome sequence offers a means to better understanding of the molecular and genetic basis of virulence of this bacterium.

scholarly journals Whole-Genome Sequence of Burkholderia pseudomallei Strain HNBP001, Isolated from a Melioidosis Patient in Hainan, China

2019 ◽  
Vol 8 (36) ◽  
Author(s):  
Xun Kang ◽  
Zengzhen Fu ◽  
Mamy Jayne Nelly Rajaofera ◽  
Chenchu Li ◽  
Nan Zhang ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Burkholderia Pseudomallei ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Epidemic Strain ◽  
Content Type

Here, we report the complete genome sequence of Burkholderia pseudomallei HNBP001, an epidemic strain isolated from a melioidosis patient with pneumonia in Hainan, China.

scholarly journals Complete Genome Sequence and Annotation of the Paracoccus pantotrophus Type Strain DSM 2944

2020 ◽  
Vol 9 (1) ◽  
Author(s):  
Julia A. Bockwoldt ◽  
Martin Zimmermann ◽  
Till Tiso ◽  
Lars M. Blank
Keyword(s):  
Gene Cluster ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Paracoccus Pantotrophus

Paracoccus spp. are metabolically versatile alphaproteobacteria able to perform heterotrophic and chemoautotrophic growth. This study describes the whole-genome sequence of the Paracoccus pantotrophus type strain DSM 2944 (ATCC 35512, LMD 82.5, GB17). The genome sequence revealed the presence of a complete phaZ phaC phaP phaR gene cluster related to polyhydroxyalkanoate metabolism.

scholarly journals Whole-Genome Sequence of Bifidobacterium longum Strain Indica, Isolated from the Gut of a Healthy Indian Adult

2017 ◽  
Vol 5 (41) ◽  
Author(s):  
Satyabrata Bag ◽  
Tarini Shankar Ghosh ◽  
Bhabatosh Das
Keyword(s):  
Gastrointestinal Tract ◽  
Genome Sequence ◽  
Anaerobic Bacterium ◽  
Acid Metabolism ◽  
Intestinal Inflammation ◽  
Bifidobacterium Longum ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Human Gastrointestinal Tract ◽  
Content Type

ABSTRACT Bifidobacterium longum, a Gram-positive rod-shaped anaerobic bacterium, inhabits the human gastrointestinal tract and contributes significantly to oligosaccharide production, amino acid metabolism, and protection against intestinal inflammation. Here, we report the whole-genome sequence of B. longum, which was isolated from the gastrointestinal tract of a healthy Indian adult.

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