scholarly journals Draft Genome Sequences of Two Salmonella enterica Strains Isolated from Sprouted Chia and Flax Seed Powders

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Jennifer Ronholm ◽  
Nicholas Petronella ◽  
Sandeep Tamber
Keyword(s):  
United States ◽  
Salmonella Enterica ◽  
Draft Genome ◽  
The United States ◽  
Whole Genome ◽  
Flax Seed ◽  
Genome Sequences ◽  
Chia Seed ◽  
First Time

A 2014 foodborne salmonellosis outbreak in Canada and the United States implicated, for the first time, sprouted chia seed powder as the vehicle of transmission. Here, we report the draft whole genome sequences of two Salmonella enterica strains isolated from sprouted powders related to the aforementioned outbreak.

scholarly journals Genome Sequences of Two Salmonella enterica Serovar Kentucky Isolates Recovered from Poultry Carcasses in the United States

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Bradd J. Haley ◽  
Seon Woo Kim ◽  
Karen Liljebjelke ◽  
Jean Guard ◽  
Jo Ann S. Van Kessel
Keyword(s):  
United States ◽  
Salmonella Enterica ◽  
Draft Genome ◽  
The United States ◽  
Genome Sequences

We report here the draft genome sequences of two Salmonella enterica serovar Kentucky eBurstGroup 15 isolates collected from poultry carcasses in Georgia (USA).

scholarly journals Draft Genome Sequences of Salmonella enterica subsp. enterica Serotype Heidelberg from Chicken and Turkey Farm Environments

2018 ◽  
Vol 7 (20) ◽  
Author(s):  
Loïc Deblais ◽  
Joy Scaria ◽  
Gireesh Rajashekara
Keyword(s):  
United States ◽  
Whole Genome Sequencing ◽  
Genome Sequencing ◽  
Salmonella Enterica ◽  
Draft Genome ◽  
Whole Genome ◽  
Genome Sequences ◽  
Midwestern United States ◽  
Content Type

Thirty-one different Salmonella enterica subsp. enterica serotype Heidelberg isolates collected from several chicken- and turkey-associated farm environments in the Midwestern United States were analyzed using whole-genome sequencing.

scholarly journals Draft Genome Sequences of Nine Vibrio sp. Isolates from across the United States Closely Related to Vibrio cholerae

2018 ◽  
Vol 7 (21) ◽  
Author(s):  
Mohammad Tarequl Islam ◽  
Kevin Liang ◽  
Monica S. Im ◽  
Jonathan Winkjer ◽  
Shelby Busby ◽  
...  
Keyword(s):  
United States ◽  
Vibrio Cholerae ◽  
Draft Genome ◽  
The United States ◽  
Whole Genome ◽  
Human Pathogen ◽  
Genome Sequences ◽  
Content Type

We are reporting whole-genome sequences of nine Vibrio sp. isolates closely related to the waterborne human pathogen Vibrio cholerae.

scholarly journals Draft Genome Sequences ofAnaplasma phagocytophilum,A. marginale, andA. ovisIsolates from Different Hosts

2018 ◽  
Vol 6 (5) ◽  
Author(s):  
Sandra Diaz-Sanchez ◽  
Angélica Hernández-Jarguín ◽  
Isabel G. Fernández de Mera ◽  
Pilar Alberdi ◽  
Erich Zweygarth ◽  
...  
Keyword(s):  
United States ◽  
Genome Sequence ◽  
Anaplasma Phagocytophilum ◽  
Draft Genome ◽  
Anaplasma Marginale ◽  
The United States ◽  
Genome Sequences ◽  
Anaplasma Ovis ◽  
First Report

ABSTRACTHere, we report the draft genome sequences of isolates ofAnaplasma phagocytophilum,Anaplasma marginale, andAnaplasma ovis. The genomes ofA. phagocytophilum(human),A. marginale(cattle), andA. ovis(goat) isolates from the United States were sequenced and characterized. This is the first report of anA. ovisgenome sequence.

scholarly journals Whole-Genome Sequencing of Nontyphoidal Salmonella enterica Isolates Obtained from Various Meat Types in Ghana

2019 ◽  
Vol 8 (15) ◽  
Author(s):  
Moon Y. F. Tay ◽  
Frederick Adzitey ◽  
Stella Amelia Sultan ◽  
Joseph Makija Tati ◽  
Kelyn L. G. Seow ◽  
...  
Keyword(s):  
Whole Genome Sequencing ◽  
Genome Sequencing ◽  
Salmonella Enterica ◽  
Draft Genome ◽  
Protein Source ◽  
Whole Genome ◽  
Genome Sequences ◽  
Content Type ◽  
Important Protein ◽  
Retail Meats

Here, we report the draft genome sequences of 16 nontyphoidal Salmonella enterica isolates obtained from locally produced meats in Tamale, Ghana, which are commonly consumed by most natives as an important protein source. The draft genomes will help provide a molecular snapshot of Salmonella enterica isolates found in these retail meats in Tamale.

scholarly journals Whole Genome Sequencing Resource of the European Larch Canker Pathogen Lachnellula willkommii for Molecular Diagnostic Marker Development

2020 ◽  
Vol 110 (7) ◽  
pp. 1255-1259
Author(s):  
Emily Giroux ◽  
Guillaume J. Bilodeau
Keyword(s):  
United States ◽  
North America ◽  
Whole Genome Sequencing ◽  
Genome Sequencing ◽  
Draft Genome ◽  
The United States ◽  
Molecular Diagnostic ◽  
Whole Genome ◽  
European Larch ◽  
The North

The filamentous ascomycete fungus Lachnellula willkommii is the causal agent of European larch canker (ELC), one of the most destructive diseases of larch in Europe and a regulated plant pathogen of quarantine significance in Canada and the United States. L. willkommii was first detected in Massachusetts, North America in 1927 on a larch plantation cultivated with nursery stock imported from Great Britain. Despite the decades of practices aimed at eliminating the pathogen, it has reappeared in coastal areas of Canada and the United States. There is concern ELC could spread throughout the range of eastern larch, a transcontinental species typical of the Boreal forest that spans the North American landscape. There is geographic range overlap between several nonpathogenic indigenous Lachnellula species and the reported distribution of L. willkommii in North America. Morphological and biological methods to distinguish L. willkommii are often inadequate as the fungus does not always produce the phenotypic structures that distinguish it from these other saprophytic Lachnellula species. Whole genome sequencing technologies were used to obtain the draft genome sequences of L. willkommii and six other Lachnellula species. Molecular markers identified from the genomic data may be used to discriminate L. willkommii from its nonpathogenic relatives.

scholarly journals Complete Genome Sequences of Three Streptococcus agalactiae Serotype Ia Isolates Obtained from Disease Outbreaks in Nile Tilapia (Oreochromis niloticus)

2018 ◽  
Vol 6 (1) ◽  
Author(s):  
Anita Jaglarz ◽  
Artur Gurgul ◽  
William J. Leigh ◽  
Janina Z. Costa ◽  
Kim D. Thompson
Keyword(s):  
United States ◽  
Streptococcus Agalactiae ◽  
Oreochromis Niloticus ◽  
Nile Tilapia ◽  
Disease Outbreaks ◽  
The United States ◽  
The Other ◽  
Whole Genome ◽  
Genome Sequences ◽  
Nile Tilapia Oreochromis Niloticus

ABSTRACT This paper describes the whole-genome sequences for three Streptococcus agalactiae serotype Ia isolates. The isolates were recovered from the brains of clinically sick tilapia, Oreochromis niloticus, that were suffering from streptococcosis. One isolate was from tilapia in the United States and the other two from fish in China.

scholarly journals Draft Genome Sequences of Eight Vibrio sp. Clinical Isolates from across the United States That Form a Basal Sister Clade to Vibrio cholerae

2019 ◽  
Vol 8 (3) ◽  
Author(s):  
Kevin Liang ◽  
Mohammad Tarequl Islam ◽  
Nora Hussain ◽  
Nathan S. Winkjer ◽  
Monica S. Im ◽  
...  
Keyword(s):  
United States ◽  
Vibrio Cholerae ◽  
Draft Genome ◽  
The United States ◽  
Clinical Isolates ◽  
Genome Sequences ◽  
Content Type ◽  
Monophyletic Cluster ◽  
Sister Clade

We sequenced the genomes of eight isolates from various regions of the United States. These isolates form a monophyletic cluster clearly related to but distinct from Vibrio cholerae.

scholarly journals Finished Whole-Genome Sequences of Two Clostridium botulinum Type A(B) Isolates

2017 ◽  
Vol 5 (21) ◽  
Author(s):  
Jessica L. Halpin ◽  
Karen Hill ◽  
Shannon L. Johnson ◽  
David Carlton Bruce ◽  
T. Brian Shirey ◽  
...  
Keyword(s):  
United States ◽  
Clostridium Botulinum ◽  
Type A ◽  
The United States ◽  
Whole Genome ◽  
Genome Sequences ◽  
Content Type ◽  
Botulinum Type ◽  
Clinically Significant

ABSTRACT Clostridium botulinum secretes a potent neurotoxin that causes devastating effects when ingested, including paralysis and death if not treated. In the United States, some clinically significant strains produce toxin type A while also harboring a silent B gene. These are the first two closed genome sequences published for this subset.

scholarly journals Draft Genome Sequences of 14 Livestock-Associated Methicillin-Resistant Staphylococcus aureus Sequence Type 398 Isolates from Swine Farms in the United States

2017 ◽  
Vol 5 (44) ◽  
Author(s):  
Samantha J. Hau ◽  
Darrell O. Bayles ◽  
David P. Alt ◽  
Timothy S. Frana ◽  
Tracy L. Nicholson
Keyword(s):  
United States ◽  
Staphylococcus Aureus ◽  
Methicillin Resistant Staphylococcus Aureus ◽  
Draft Genome ◽  
The United States ◽  
Sequence Type ◽  
Genome Sequences ◽  
Methicillin Resistant ◽  
Content Type ◽  
Mrsa St398

ABSTRACT Livestock-associated methicillin-resistant Staphylococcus aureus (LA-MRSA) is a bacterium carried by or obtained from swine and other livestock. The initial and predominant swine-associated LA-MRSA sequence type (ST) identified is ST398. Here, we present 14 draft genome sequences from LA-MRSA ST398 isolates found in the United States.

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