scholarly journals Draft Genome Sequence and Gene Annotation of Stemphylium lycopersici Strain CIDEFI-216

2015 ◽  
Vol 3 (5) ◽  
Author(s):  
Mario E. E. Franco ◽  
Silvina López ◽  
Rocio Medina ◽  
Mario C. N. Saparrat ◽  
Pedro Balatti
Keyword(s):  
Genome Sequence ◽  
Gene Annotation ◽  
Pathogenic Fungus ◽  
Draft Genome ◽  
Gray Leaf Spot ◽  
Draft Genome Sequence ◽  
Leaf Spot Disease ◽  
Stemphylium Lycopersici ◽  
Its Gene ◽  
Etiological Agents

Stemphylium lycopersici is a plant-pathogenic fungus that is widely distributed throughout the world. In tomatoes, it is one of the etiological agents of gray leaf spot disease. Here, we report the first draft genome sequence of S. lycopersici , including its gene structure and functional annotation.

scholarly journals Draft Genome Sequences of Sporulating (CIDEFI-213) and Nonsporulating (CIDEFI-212) Strains of Stemphylium lycopersici

2018 ◽  
Vol 7 (6) ◽  
Author(s):  
Rocio Medina ◽  
Mario Emilio Ernesto Franco ◽  
Gustavo Lucentini ◽  
Mario Carlos Nazareno Saparrat ◽  
Pedro Alberto Balatti
Keyword(s):  
Leaf Spot ◽  
Pathogenic Fungus ◽  
Draft Genome ◽  
Gray Leaf Spot ◽  
Economic Losses ◽  
Leaf Spot Disease ◽  
Genome Sequences ◽  
Content Type ◽  
Spot Disease ◽  
Stemphylium Lycopersici

Stemphylium lycopersici (Pleosporales) is a pathogenic fungus found on a broad range of plant hosts. It is one of the causal agents of gray leaf spot disease in tomato that causes severe yield reductions and economic losses worldwide.

scholarly journals First draft genome sequence of a strain belonging to the Zoogloea genus and its gene expression in situ

2017 ◽  
Vol 12 (1) ◽  
Author(s):  
Emilie E. L. Muller ◽  
Shaman Narayanasamy ◽  
Myriam Zeimes ◽  
Cédric C. Laczny ◽  
Laura A. Lebrun ◽  
...  
Keyword(s):  
Gene Expression ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Its Gene

scholarly journals Draft Genome Sequence of Rhizobium sp. Strain TBD182, an Antagonist of the Plant-Pathogenic Fungus Fusarium oxysporum, Isolated from a Novel Hydroponics System Using Organic Fertilizer

2017 ◽  
Vol 5 (11) ◽  
Author(s):  
Yuichiro Iida ◽  
Kazuki Fujiwara ◽  
Nobutaka Someya ◽  
Makoto Shinohara
Keyword(s):  
Fusarium Oxysporum ◽  
Genome Sequence ◽  
Molecular Mechanisms ◽  
Pathogenic Fungus ◽  
Organic Fertilizer ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Fungistatic Activity ◽  
Rhizobium Sp

ABSTRACT Rhizobium sp. strain TBD182, isolated from a novel hydroponics system, is an antagonistic bacterium that inhibits the mycelial growth of Fusarium oxysporum but does not eliminate the pathogen. We report the draft genome sequence of TBD182, which may contribute to elucidation of the molecular mechanisms of its fungistatic activity.

scholarly journals Draft Genome Sequence of Sclerotinia borealis, a Psychrophilic Plant Pathogenic Fungus

2014 ◽  
Vol 2 (1) ◽  
Author(s):  
A. V. Mardanov ◽  
A. V. Beletsky ◽  
V. V. Kadnikov ◽  
A. N. Ignatov ◽  
N. V. Ravin
Keyword(s):  
Genome Sequence ◽  
Pathogenic Fungus ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Plant Pathogenic Fungus

scholarly journals Draft Genome Sequence of Penicillium marneffei Strain PM1

2011 ◽  
Vol 10 (12) ◽  
pp. 1740-1741 ◽  
Author(s):  
Patrick C. Y. Woo ◽  
Susanna K. P. Lau ◽  
Bin Liu ◽  
James J. Cai ◽  
Ken T. K. Chong ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Polyketide Synthase ◽  
Pathogenic Fungus ◽  
Complete Mitochondrial Genome ◽  
Draft Genome ◽  
Penicillium Marneffei ◽  
Sexual Cycle ◽  
Draft Genome Sequence ◽  
Hiv Positive ◽  
Content Type

ABSTRACT Penicillium marneffei is the most important thermal dimorphic, pathogenic fungus endemic in China and Southeast Asia and is particularly important in HIV-positive patients. We report the 28,887,485-bp draft genome sequence of P. marneffei , which contains its complete mitochondrial genome, sexual cycle genes, a high diversity of Mp1p homologues, and polyketide synthase genes.

scholarly journals Draft Genome Sequence of Dactylonectria macrodidyma , a Plant-Pathogenic Fungus in the Nectriaceae

2015 ◽  
Vol 3 (2) ◽  
Author(s):  
Martha Malapi-Wight ◽  
Catalina Salgado-Salazar ◽  
Jill Demers ◽  
Daniel Veltri ◽  
Jo Anne Crouch
Keyword(s):  
Genome Sequence ◽  
Pathogenic Fungus ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Plant Pathogenic Fungus

scholarly journals Draft Genome Sequence of the Pathogenic Fungus Scedosporium apiospermum

2014 ◽  
Vol 2 (5) ◽  
Author(s):  
P. Vandeputte ◽  
S. Ghamrawi ◽  
M. Rechenmann ◽  
A. Iltis ◽  
S. Giraud ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Pathogenic Fungus ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Scedosporium Apiospermum

scholarly journals The draft genome sequence of mandrill (Mandrillus sphinx)

2018 ◽  
Author(s):  
Ye Yin ◽  
Ting Yang ◽  
Huan Liu ◽  
Ziheng Huang ◽  
Yaolei Zhang ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Gene Annotation ◽  
World Monkey ◽  
Draft Genome ◽  
Human Diseases ◽  
Draft Genome Sequence ◽  
Primate Species ◽  
Protein Coding ◽  
Repeat Elements ◽  
Mandrillus Sphinx

AbstractBackgroundMandrill (Mandrillus sphinx) is a primate species which belong to Old World monkey (Cercopithecidae) family. It is closely related to human, serving as model for some human diseases researches. However, genetic researches and genomic resources of mandrill were limited, especially comparing to other primate species.FindingsHere we sequenced 284 Gb data, providing 96-fold coverage (considering the estimate genome size of 2.9 Gb), to construct a reference genome for mandrill. The assembled draft genome was 2.79 Gb with contig N50 of 20.48 Kb and scaffold N50 of 3.56 Mb. We annotated the mandrill genome to find 43.83% repeat elements, as well as 21,906 protein coding genes. We found good quality of the draft genome and gene annotation by BUSCO analysis which revealed 98% coverage of the BUSCOs.ConclusionsWe established the first draft genome sequence of mandrill, which is valuable resource for future evolutionary and human diseases studies.

scholarly journals Draft Genome Sequence of Glycoside Hydrolase-Producing Trichoderma asperellum Strain IC-1

2020 ◽  
Vol 9 (40) ◽  
Author(s):  
Hiro Takahashi ◽  
Erika Sakagawa ◽  
Ryosuke Toyoda ◽  
Taichiro Motomura ◽  
Masataka Murase ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Glycoside Hydrolases ◽  
Cellulosic Biomass ◽  
Draft Genome Sequence ◽  
Trichoderma Asperellum ◽  
Content Type ◽  
Its Gene ◽  
Gene Regulatory ◽  
Gene Structures

ABSTRACT Glycoside hydrolases capable of degrading lignocellulose are important for effectively utilizing cellulosic biomass as a next-generation chemical resource. Trichoderma asperellum IC-1 produces various glycoside hydrolases. Here, we report a draft genome sequence of T. asperellum IC-1 to better understand its gene structures and gene regulatory mechanisms.

scholarly journals First De Novo Draft Genome Sequence of the Pathogenic Fungus Fusarium udum F02845, Associated with Pigeonpea (Cajanus cajan L. Millspaugh) Wilt

2018 ◽  
Vol 7 (13) ◽  
Author(s):  
Alok Kumar Srivastava ◽  
Prem Lal Kashyap ◽  
Hillol Chakdar ◽  
Murugan Kumar ◽  
Anchal Kumar Srivastava ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Fungal Pathogen ◽  
Cajanus Cajan ◽  
De Novo ◽  
Pathogenic Fungus ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Fusarium Udum

Fusarium udum F02845 is a destructive fungal pathogen which causes pigeonpea (Cajanus cajan L. Millspaugh) wilt.

Sign in / Sign up

Export Citation Format

Share Document