scholarly journals Draft Genome Sequence of Penicillium marneffei Strain PM1

2011 ◽  
Vol 10 (12) ◽  
pp. 1740-1741 ◽  
Author(s):  
Patrick C. Y. Woo ◽  
Susanna K. P. Lau ◽  
Bin Liu ◽  
James J. Cai ◽  
Ken T. K. Chong ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Polyketide Synthase ◽  
Pathogenic Fungus ◽  
Complete Mitochondrial Genome ◽  
Draft Genome ◽  
Penicillium Marneffei ◽  
Sexual Cycle ◽  
Draft Genome Sequence ◽  
Hiv Positive ◽  
Content Type

ABSTRACT Penicillium marneffei is the most important thermal dimorphic, pathogenic fungus endemic in China and Southeast Asia and is particularly important in HIV-positive patients. We report the 28,887,485-bp draft genome sequence of P. marneffei , which contains its complete mitochondrial genome, sexual cycle genes, a high diversity of Mp1p homologues, and polyketide synthase genes.

scholarly journals Draft Genome Sequence of Rhizobium sp. Strain TBD182, an Antagonist of the Plant-Pathogenic Fungus Fusarium oxysporum, Isolated from a Novel Hydroponics System Using Organic Fertilizer

2017 ◽  
Vol 5 (11) ◽  
Author(s):  
Yuichiro Iida ◽  
Kazuki Fujiwara ◽  
Nobutaka Someya ◽  
Makoto Shinohara
Keyword(s):  
Fusarium Oxysporum ◽  
Genome Sequence ◽  
Molecular Mechanisms ◽  
Pathogenic Fungus ◽  
Organic Fertilizer ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Fungistatic Activity ◽  
Rhizobium Sp

ABSTRACT Rhizobium sp. strain TBD182, isolated from a novel hydroponics system, is an antagonistic bacterium that inhibits the mycelial growth of Fusarium oxysporum but does not eliminate the pathogen. We report the draft genome sequence of TBD182, which may contribute to elucidation of the molecular mechanisms of its fungistatic activity.

scholarly journals Draft Genome Sequence of Mycobacterium colombiense

2017 ◽  
Vol 5 (14) ◽  
Author(s):  
Amar Bouam ◽  
Catherine Robert ◽  
Anthony Levasseur ◽  
Michel Drancourt
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Positive Patient ◽  
Draft Genome Sequence ◽  
Hiv Positive ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Rna Genes

ABSTRACT Mycobacterium colombiense is a rapidly growing mycobacterium initially isolated from the blood of an HIV-positive patient in Colombia. Its 5,854,893-bp draft genome exhibits a G+C content of 67.64%, 5,233 protein-coding genes, and 54 predicted RNA genes.

scholarly journals Draft Genome Sequence of Mycobacterium peregrinum Isolated from an HIV-Positive Patient in South Africa

2017 ◽  
Vol 5 (31) ◽  
Author(s):  
Shaheed V. Omar ◽  
Mushal Allam ◽  
Lavania Joseph ◽  
Senzo Mtshali ◽  
Nazir A. Ismail ◽  
...  
Keyword(s):  
South African ◽  
Genome Sequence ◽  
Infected Patient ◽  
Sputum Sample ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Hiv Positive ◽  
Coding Sequences ◽  
Content Type ◽  
Rna Genes

ABSTRACT Here, we report a draft genome sequence of Mycobacterium peregrinum obtained from a sputum sample of a South African HIV-infected patient with suspected pulmonary tuberculosis. The genome described here comprises 6,931,852 bp, revealing 66.2% G+C content, 6,808 coding sequences, and 81 RNA genes.

scholarly journals First De Novo Draft Genome Sequence of the Pathogenic Fungus Fusarium udum F02845, Associated with Pigeonpea (Cajanus cajan L. Millspaugh) Wilt

2018 ◽  
Vol 7 (13) ◽  
Author(s):  
Alok Kumar Srivastava ◽  
Prem Lal Kashyap ◽  
Hillol Chakdar ◽  
Murugan Kumar ◽  
Anchal Kumar Srivastava ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Fungal Pathogen ◽  
Cajanus Cajan ◽  
De Novo ◽  
Pathogenic Fungus ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Fusarium Udum

Fusarium udum F02845 is a destructive fungal pathogen which causes pigeonpea (Cajanus cajan L. Millspaugh) wilt.

scholarly journals First Draft Genome Sequence of a Clinical Strain of Nocardia cerradoensis

2017 ◽  
Vol 5 (39) ◽  
Author(s):  
Gema Carrasco ◽  
Sara Monzón ◽  
Pilar Jiménez ◽  
Isabel Cuesta ◽  
Joaquín Bartolomé-Alvarez ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Polyketide Synthase ◽  
Draft Genome ◽  
Gene Clusters ◽  
Immunocompetent Patient ◽  
Draft Genome Sequence ◽  
Clinical Strain ◽  
Intrinsic Resistance ◽  
Biosynthetic Gene Clusters ◽  
Content Type

ABSTRACT This paper reports the first draft genome sequence for a strain of Nocardia cerradoensis obtained from an immunocompetent patient with a knee infection. The 8.2-Mb genome has 8,329 coding sequences, including intrinsic resistance genes, biosynthetic gene clusters for polyketide synthase and nonribosomal peptide synthase, virulence genes, and prophages.

scholarly journals Draft Genome Sequence of the Human-Pathogenic Fungus Scedosporium boydii

2017 ◽  
Vol 5 (37) ◽  
Author(s):  
Ludovic Duvaux ◽  
Jason Shiller ◽  
Patrick Vandeputte ◽  
Thomas Dugé de Bernonville ◽  
Christopher Thornton ◽  
...  
Keyword(s):  
Cystic Fibrosis ◽  
Genome Sequence ◽  
Fungal Pathogen ◽  
Pathogenic Fungus ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Pathogenic Mechanisms ◽  
Human Pathogenic Fungus ◽  
Opportunistic Fungal Pathogen

ABSTRACT The opportunistic fungal pathogen Scedosporium boydii is the most common Scedosporium species in French patients with cystic fibrosis. Here we present the first genome report for S. boydii, providing a resource which may enable the elucidation of the pathogenic mechanisms in this species.

scholarly journals Draft Genome Sequence of Urease-Producing Pseudorhodobacter sp. Strain E13, Isolated from the Yellow Sea in Gunsan, South Korea

2019 ◽  
Vol 8 (23) ◽  
Author(s):  
Si Chul Kim ◽  
Hyo Jung Lee
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Yellow Sea ◽  
Draft Genome ◽  
The Yellow Sea ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Gram Negative ◽  
Content Type

Here, we report the draft genome sequence of Pseudorhodobacter sp. strain E13, a Gram-negative, aerobic, nonflagellated, and rod-shaped bacterium which was isolated from the Yellow Sea in South Korea. The assembled genome sequence is 3,878,578 bp long with 3,646 protein-coding sequences in 159 contigs.

scholarly journals Draft Genome Sequence of Saccharomonospora sp. Strain LRS4.154, a Moderately Halophilic Actinobacterium with the Biotechnologically Relevant Polyketide Synthase and Nonribosomal Peptide Synthetase Systems

2017 ◽  
Vol 5 (21) ◽  
Author(s):  
Scarlett Alonso-Carmona ◽  
Blanca Vera-Gargallo ◽  
Rafael R. de la Haba ◽  
Antonio Ventosa ◽  
Horacio Sandoval-Trujillo ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Polyketide Synthase ◽  
Draft Genome ◽  
Nonribosomal Peptide Synthetase ◽  
Open Reading Frames ◽  
Draft Genome Sequence ◽  
Nonribosomal Peptide ◽  
Moderately Halophilic ◽  
Peptide Synthetase ◽  
Reading Frames

ABSTRACT The draft genome sequence of Saccharomonospora sp. strain LRS4.154, a moderately halophilic actinobacterium, has been determined. The genome has 4,860,108 bp, a G+C content of 71.0%, and 4,525 open reading frames (ORFs). The clusters of PKS and NRPS genes, responsible for the biosynthesis of a large number of biomolecules, were identified in the genome.

scholarly journals Draft Genome Sequence of a Vibrio harveyi Strain Associated with Vibriosis in Pacific White Shrimp (Litopenaeus vannamei)

2017 ◽  
Vol 5 (7) ◽  
Author(s):  
Emille Moreno ◽  
Marci Parks ◽  
Lee J. Pinnell ◽  
James J. Tallman ◽  
Jeffrey W. Turner
Keyword(s):  
Genome Sequence ◽  
Litopenaeus Vannamei ◽  
Vibrio Harveyi ◽  
Draft Genome ◽  
Penaeid Shrimp ◽  
Pacific White Shrimp ◽  
Draft Genome Sequence ◽  
White Shrimp ◽  
Content Type ◽  
Future Studies

ABSTRACT Vibrio harveyi is a Gram-negative bacterium associated with vibriosis in penaeid shrimp. Here, we report the draft genome sequence of a V. harveyi strain isolated from Pacific white shrimp (Litopenaeus vannamei) during a vibriosis outbreak. The availability of this genome will aid future studies of vibriosis in shrimp aquaculture.

scholarly journals Draft Genome Sequence of Pantoea sp. Strain A4, a Rafflesia-Associated Bacterium That ProducesN-Acylhomoserine Lactones as Quorum-Sensing Molecules

2012 ◽  
Vol 194 (23) ◽  
pp. 6610-6610 ◽  
Author(s):  
Kar-Wai Hong ◽  
Han Ming Gan ◽  
Siew-Moon Low ◽  
Patrick Kok Yuen Lee ◽  
Yee-Meng Chong ◽  
...  
Keyword(s):  
Quorum Sensing ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Negative Bacterium ◽  
Gram Negative ◽  
Content Type ◽  
First Time

ABSTRACTPantoeasp. strain A4 is a Gram-negative bacterium isolated from theRafflesiaflower. We present here, for the first time, the genome sequence ofRafflesia-associatedPantoeasp. strain A4, which exhibited quorum-sensing activity.

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