scholarly journals Draft Genome Sequence of Rhizobium sp. Strain TBD182, an Antagonist of the Plant-Pathogenic Fungus Fusarium oxysporum, Isolated from a Novel Hydroponics System Using Organic Fertilizer

2017 ◽  
Vol 5 (11) ◽  
Author(s):  
Yuichiro Iida ◽  
Kazuki Fujiwara ◽  
Nobutaka Someya ◽  
Makoto Shinohara
Keyword(s):  
Fusarium Oxysporum ◽  
Genome Sequence ◽  
Molecular Mechanisms ◽  
Pathogenic Fungus ◽  
Organic Fertilizer ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Fungistatic Activity ◽  
Rhizobium Sp

ABSTRACT Rhizobium sp. strain TBD182, isolated from a novel hydroponics system, is an antagonistic bacterium that inhibits the mycelial growth of Fusarium oxysporum but does not eliminate the pathogen. We report the draft genome sequence of TBD182, which may contribute to elucidation of the molecular mechanisms of its fungistatic activity.

scholarly journals First Draft Genome Sequence of Xanthomonas axonopodis pv. eucalyptorum, Causal Agent of Bacterial Leaf Blight on Eucalypt

2019 ◽  
Vol 8 (16) ◽  
Author(s):  
Yane F. Neves ◽  
Samuel A. Santos ◽  
Lúcio M. S. Guimarães ◽  
Pedro M. P. Vidigal ◽  
Jorge L. Badel ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Bacterial Blight ◽  
Molecular Mechanisms ◽  
Draft Genome ◽  
Genomic Data ◽  
Leaf Blight ◽  
Bacterial Leaf Blight ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Xanthomonas Axonopodis

Here, we report the annotated draft genome sequence of Xanthomonas axonopodis pv. eucalyptorum pathotype strain LPF602 (synonym Xanthomonas axonopodis BSC45a), isolated from eucalypt leaves showing bacterial blight symptoms in Brazil. The availability of these genomic data will help improve the understanding of the evolution and molecular mechanisms involved in the pathogenesis of this microorganism.

scholarly journals Draft Genome Sequence of Penicillium marneffei Strain PM1

2011 ◽  
Vol 10 (12) ◽  
pp. 1740-1741 ◽  
Author(s):  
Patrick C. Y. Woo ◽  
Susanna K. P. Lau ◽  
Bin Liu ◽  
James J. Cai ◽  
Ken T. K. Chong ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Polyketide Synthase ◽  
Pathogenic Fungus ◽  
Complete Mitochondrial Genome ◽  
Draft Genome ◽  
Penicillium Marneffei ◽  
Sexual Cycle ◽  
Draft Genome Sequence ◽  
Hiv Positive ◽  
Content Type

ABSTRACT Penicillium marneffei is the most important thermal dimorphic, pathogenic fungus endemic in China and Southeast Asia and is particularly important in HIV-positive patients. We report the 28,887,485-bp draft genome sequence of P. marneffei , which contains its complete mitochondrial genome, sexual cycle genes, a high diversity of Mp1p homologues, and polyketide synthase genes.

scholarly journals Draft Genome Sequence of Thiobacimonas sp. Strain D13, a Phthalate Ester-Degrading Bacterium Isolated from Deep-Sea Sediments

2019 ◽  
Vol 8 (24) ◽  
Author(s):  
Yang Liu ◽  
Tuyan Luo ◽  
Qiu Lin ◽  
Runying Zeng
Keyword(s):  
Genome Sequence ◽  
Deep Sea ◽  
Molecular Mechanisms ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Phthalate Ester ◽  
Content Type ◽  
Southeastern Pacific ◽  
Degrading Bacterium ◽  
Degradation Ability

Thiobacimonas sp. strain D13, newly isolated from the sediments of the southeastern Pacific, can effectively degrade phthalate ester. Here, we report the 5.22-Mbp draft genome sequence of this strain, which will provide insights into the molecular mechanisms underlying its degradation ability.

scholarly journals Draft Genome Sequence of Streptomyces aureoverticillatus HN6, a Strain Antagonistic against Fusarium oxysporum f. sp. cubense Race 4

2020 ◽  
Vol 9 (23) ◽  
Author(s):  
Rong Di ◽  
Yee Chen Low ◽  
Lanying Wang ◽  
Yanping Luo
Keyword(s):  
Fusarium Oxysporum ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Antibiotic Biosynthesis ◽  
Content Type ◽  
Race 4

ABSTRACT Streptomyces aureoverticillatus HN6 was isolated in Hainan, China. It is highly inhibitory to Fusarium oxysporum f. sp. cubense race 4 (FOC4), which causes banana Fusarium wilt. The HN6 genome was fully sequenced and assembled. Bionformatic analysis shows that the HN6 genome contains at least 208 genes involved in antibiotic biosynthesis.

scholarly journals Draft Genome Sequence of Dicyma pulvinata Strain 414-3, a Mycoparasite of Cladosporium fulvum, Causal Agent of Tomato Leaf Mold

2019 ◽  
Vol 8 (35) ◽  
Author(s):  
Hirotoshi Sushida ◽  
Takuya Sumita ◽  
Yumiko Higashi ◽  
Yuichiro Iida
Keyword(s):  
Genome Sequence ◽  
Molecular Mechanisms ◽  
Draft Genome ◽  
Tomato Leaf ◽  
Draft Genome Sequence ◽  
Cladosporium Fulvum ◽  
Content Type ◽  
Leaf Mold ◽  
Tomato Leaf Mold ◽  
Mycoparasitic Fungus

Dicyma pulvinata strain 414-3, isolated from the surface of a tomato leaf, is a mycoparasitic fungus of Cladosporium fulvum, which causes leaf mold of tomato. We report here the draft genome sequence of strain 414-3, which will contribute to elucidating the molecular mechanisms involved in the mycoparasitism.

scholarly journals Draft Genome Sequence of an Isolate of Fusarium oxysporum f. sp. melongenae, the Causal Agent of Fusarium Wilt of Eggplant

2017 ◽  
Vol 5 (7) ◽  
Author(s):  
Zhangyong Dong ◽  
Tom Hsiang ◽  
Mei Luo ◽  
Meimei Xiang
Keyword(s):  
Fusarium Oxysporum ◽  
Fusarium Wilt ◽  
Genome Sequence ◽  
Draft Genome ◽  
Causal Agent ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Final Assembly

ABSTRACT Here, we present the genome sequence of an isolate (14004) of Fusarium oxysporum f. sp. melongenae, an eggplant pathogen. The final assembly consists of 1,631 scaffolds with 53,986,354 bp (G+C content, 46.4%) and 16,485 predicted genes.

scholarly journals Draft Genome Sequence of Escherichia coli XH001, a Producer of l-Threonine in Industry

2011 ◽  
Vol 193 (22) ◽  
pp. 6406-6407 ◽  
Author(s):  
Huilin Yang ◽  
Yuling Liao ◽  
Bin Wang ◽  
Ying Lin ◽  
Li Pan
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Molecular Mechanisms ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
High Quality ◽  
Content Type ◽  
Plasmid Sequence

l-Threonine has been widely used as a supplement in the food, pharmaceutical, and cosmetic industries. Here, we present a high-quality draft annotated genome sequence ofEscherichia coliXH001, a producer ofl-threonine in industry. Its genome and plasmid sequence will provide clues about the molecular mechanisms underlying its beneficial properties.

scholarly journals First De Novo Draft Genome Sequence of the Pathogenic Fungus Fusarium udum F02845, Associated with Pigeonpea (Cajanus cajan L. Millspaugh) Wilt

2018 ◽  
Vol 7 (13) ◽  
Author(s):  
Alok Kumar Srivastava ◽  
Prem Lal Kashyap ◽  
Hillol Chakdar ◽  
Murugan Kumar ◽  
Anchal Kumar Srivastava ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Fungal Pathogen ◽  
Cajanus Cajan ◽  
De Novo ◽  
Pathogenic Fungus ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Fusarium Udum

Fusarium udum F02845 is a destructive fungal pathogen which causes pigeonpea (Cajanus cajan L. Millspaugh) wilt.

scholarly journals Draft Genome Sequence of an Onion Basal Rot Isolate of Fusarium proliferatum

2019 ◽  
Vol 8 (1) ◽  
Author(s):  
Andrew D. Armitage ◽  
Andrew Taylor ◽  
Michelle T. Hulin ◽  
Alison C. Jackson ◽  
Richard J. Harrison ◽  
...  
Keyword(s):  
Fusarium Oxysporum ◽  
Secondary Metabolite ◽  
Genome Sequence ◽  
Draft Genome ◽  
Fusarium Proliferatum ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Basal Rot ◽  
Rot Disease ◽  
Onion Basal Rot

Fusarium proliferatum is a component of the onion basal rot disease complex. We present an annotated F. proliferatum draft genome sequence, totaling 45.8 Mb in size, assembled into 597 contigs, with a predicted 15,418 genes. The genome contains 58 secondary metabolite clusters and homologs of the Fusarium oxysporum effector SIX2.

scholarly journals Draft Genome Sequence of FGL03-6, a Race 1 Strain of Fusarium oxysporum f. sp. conglutinans, the Causal Agent of Cabbage Fusarium Wilt

2018 ◽  
Vol 6 (16) ◽  
pp. e00191-18 ◽  
Author(s):  
Honghao Lv ◽  
Yuhong Yang ◽  
Xing Liu ◽  
Jian Ling ◽  
Zhiyuan Fang ◽  
...  
Keyword(s):  
Fusarium Oxysporum ◽  
Fusarium Wilt ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Causal Agent ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Race 1

ABSTRACT We present here the draft genome sequence of FGL03-6, a race 1 strain of Fusarium oxysporum f. sp. conglutinans, the pathogen causing Fusarium yellows of cabbage. The FGL03-6 genome consists of 414 scaffolds with 61,662,789 bp (GC content, 47.9%) and 9,790 predicted genes.

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