scholarly journals Draft Genome Sequence of a Pathogenic O86:H25 Sequence Type 57 Escherichia coli Strain Isolated from Poultry and Carrying 12 Acquired Antibiotic Resistance Genes

2015 ◽  
Vol 3 (5) ◽  
Author(s):  
Daniela Jones-Dias ◽  
Vera Manageiro ◽  
Daniel Ataíde Sampaio ◽  
Luís Vieira ◽  
Manuela Caniça
Keyword(s):  
Escherichia Coli ◽  
Antibiotic Resistance ◽  
Genome Sequence ◽  
Draft Genome ◽  
Antibiotic Resistance Genes ◽  
Multidrug Resistant ◽  
Coli Strain ◽  
Draft Genome Sequence ◽  
E Coli ◽  
Acquired Antibiotic Resistance

Escherichia coli is a commensal bacterium that is frequently associated with multidrug-resistant zoonotic and foodborne infections. Here, we report the 5.6-Mbp draft genome sequence of an E. coli recovered from poultry, which encodes multiple acquired antibiotic resistance determinants, virulence factors, pathogenicity determinants, and mobile genetic elements.

scholarly journals High-Quality Draft Genome Sequence of the Multidrug-Resistant Clinical Isolate Enterococcus faecium VRE16

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Suelen Scarpa de Mello ◽  
Daria Van Tyne ◽  
Andrei Nicoli Gebieluca Dabul ◽  
Michael S. Gilmore ◽  
Ilana L. B. C. Camargo
Keyword(s):  
Antibiotic Resistance ◽  
Virulence Factors ◽  
Genome Sequence ◽  
Enterococcus Faecium ◽  
Draft Genome ◽  
Antibiotic Resistance Genes ◽  
Multidrug Resistant ◽  
Draft Genome Sequence ◽  
Commensal Bacterium ◽  
High Quality

Specific lineages of the commensal bacterium Enterococcus faecium belonging to CC17, especially ST412, have been isolated from patients in several hospitals worldwide and harbor antibiotic resistance genes and virulence factors. Here, we report a high-quality draft genome sequence and highlight features of E. faecium VRE16, a representative of this ST.

scholarly journals Draft Genome Sequence of an Escherichia coli Strain Isolated from a Gallus gallus Broiler Producing the Novel CTX-M-166 Variant

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Vera Manageiro ◽  
Lurdes Clemente ◽  
Sílvia Duarte ◽  
Luís Vieira ◽  
Manuela Caniça
Keyword(s):  
Escherichia Coli ◽  
Antibiotic Resistance ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gallus Gallus ◽  
Coli Strain ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
The Novel ◽  
Sequence Analyses

We report here the draft genome sequence of the CTX-M-166-harboring O6:H16 sequence type 48 (ST48)- fimH 34 Escherichia coli strain recovered from a Gallus gallus broiler. Sequence analyses revealed the presence of an IncI1/ST103-IS Ecp1 - bla CTX-M-166 - orf477 plasmid region and of diverse antibiotic resistance and virulence-acquired genes.

scholarly journals Draft Genome Sequence of a Multidrug-Resistant Escherichia coli Sequence Type 1193 Pandemic Clone Isolated from Wastewater in Austria

2021 ◽  
Vol 10 (37) ◽  
Author(s):  
Adriana Cabal ◽  
Nadine Peischl ◽  
Gerhard Rab ◽  
Anna Stöger ◽  
Burkhard Springer ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Draft Genome ◽  
Treatment Plant ◽  
Multidrug Resistant ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
Fluoroquinolone Resistance ◽  
Content Type ◽  
E Coli

Extraintestinal Escherichia coli sequence type 1193 (ST1193) is an important source of fluoroquinolone resistance, which has emerged in recent years. We report the first draft genome sequence and annotation of a multidrug-resistant E. coli ST1193 strain obtained from a wastewater treatment plant in Austria.

scholarly journals Draft Genome Sequence of Escherichia coli Strain Tj, Isolated from the Varzob River in Tajikistan

2020 ◽  
Vol 9 (41) ◽  
Author(s):  
Munavvara Dzhuraeva ◽  
Mehrangez Shokirova ◽  
Ani Azaryan ◽  
Hovik Panosyan ◽  
Khursheda Bobodzhanova ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Draft Genome ◽  
Coli Strain ◽  
Draft Genome Sequence ◽  
Gene Encoding ◽  
Content Type ◽  
E Coli ◽  
Lambdoid Phage ◽  
Specific Phage

ABSTRACT The 4.6-Mbp draft genome sequence of Escherichia coli strain Tj, isolated from the Varzob River in Tajikistan, is presented. This strain possesses four prophage elements related to Shigella phage SfV, E. coli O157:H7-specific phage ϕV10, lambdoid phage HK225, and coliphage Ayreon. It contains a gene encoding a hemolysin E toxin.

scholarly journals Draft Genome Sequence of Escherichia coli Strain SEC470, Isolated from a Piglet Experiencing Diarrhea

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Hongbin Liu ◽  
Li Song ◽  
Yinghua Cai ◽  
Yashan Wang ◽  
Lei Yu
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Genetic Basis ◽  
Draft Genome ◽  
Coli Strain ◽  
Draft Genome Sequence ◽  
E Coli

Escherichia coli strain SEC470 is a diarrhea-causing strain, isolated from a piglet experiencing serious diarrhea in Jingxi Province, China. Here, we present the draft genome of this strain, which provides the genetic basis for exploring the mechanism of enterotoxigenic E. coli infections.

scholarly journals Draft Genome Sequence of Extended-Spectrum-β-Lactamase-Producing Escherichia coli Strain CCUG 62462, Isolated from a Urine Sample

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Anna Johnning ◽  
Hedvig E. Jakobsson ◽  
Fredrik Boulund ◽  
Francisco Salvà-Serra ◽  
Edward R. B. Moore ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Urine Sample ◽  
Genome Sequence ◽  
Draft Genome ◽  
Coli Strain ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
Total Size ◽  
E Coli ◽  
Extended Spectrum

The draft genome sequence has been determined for an extended-spectrum-β-lactamase (ESBL)-producing ( bla CTX-M-15 ) Escherichia coli strain (CCUG 62462), composed of 119 contigs and a total size of 5.27 Mb. This E. coli is serotype O25b and sequence type 131, a pandemic clonal group, causing worldwide antimicrobial-resistant infections.

scholarly journals Draft Genome Sequence of Multidrug-Resistant Escherichia coli NIVEDI-P44, Isolated from a Chicken Fecal Sample in Northeast India

2018 ◽  
Vol 6 (17) ◽  
Author(s):  
Rituparna Tewari ◽  
Susweta Das Mitra ◽  
Sangita Das ◽  
Sudhir Jadhao ◽  
Gayatri Mishra ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Fecal Sample ◽  
Draft Genome ◽  
Antibiotic Resistance Genes ◽  
Multidrug Resistant ◽  
Northeast India ◽  
Draft Genome Sequence ◽  
Multiple Antibiotic Resistance ◽  
Content Type

ABSTRACT We report here the draft genome sequence of a multidrug-resistant Escherichia coli strain (NIVEDI-P44) isolated from a chicken fecal sample. The estimated genome size is 4.76 Mb, with a G+C content of 50.65%. The genome harbors multiple antibiotic resistance genes, bla DHA-1 , mph (A), strA , strB , dfrA14 , sul-2 , tet (A), and qnrS1 .

scholarly journals Draft Genome Sequence of Escherichia coli Strain M15-4, a Typical Enteropathogenic E. coli Strain Isolated in Mexico

2018 ◽  
Vol 6 (5) ◽  
Author(s):  
José Antonio Magaña-Lizárraga ◽  
Yesmi Patricia Ahumada-Santos ◽  
Jesús Ricardo Parra-Unda ◽  
Magdalena de J. Uribe-Beltrán ◽  
Bruno Gómez-Gil ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Drug Resistance ◽  
Genome Sequence ◽  
Draft Genome ◽  
Coli Strain ◽  
Draft Genome Sequence ◽  
Pathogenic Potential ◽  
E Coli ◽  
Infant Girl ◽  
Mexican Isolate

ABSTRACT We present here the first draft genome sequence of a typical enteropathogenic Escherichia coli serotype O55:H51 strain, M15-4, isolated from a 2-month-old infant girl with acute diarrhea. The study of this Mexican isolate will provide insights to the virulence and drug resistance traits involved in its pathogenic potential.

scholarly journals Draft Genome Sequence of Uropathogenic Escherichia coli Strain NB8

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Xing-bei Weng ◽  
Zu-huang Mi ◽  
Chun-xin Wang ◽  
Jian-ming Zhu
Keyword(s):  
Escherichia Coli ◽  
Drug Resistance ◽  
Genome Sequence ◽  
Draft Genome ◽  
Coli Strain ◽  
Uropathogenic Escherichia Coli ◽  
Draft Genome Sequence ◽  
Beta Lactams ◽  
E Coli ◽  
Genes Encoding

Escherichia coli NB8 is a clinical pyelonephritis isolate. Here, we report the draft genome sequence of uropathogenic E. coli NB8, which contains drug resistance genes encoding resistance to beta-lactams, aminoglycosides, quinolones, macrolides, colistin, sulfonamide-trimethoprim, and tetracycline. NB8 infects the kidney and bladder, making it an important tool for studying E. coli pathogenesis.

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