scholarly journals Draft Genome Sequence of an Escherichia coli Strain Isolated from a Gallus gallus Broiler Producing the Novel CTX-M-166 Variant

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Vera Manageiro ◽  
Lurdes Clemente ◽  
Sílvia Duarte ◽  
Luís Vieira ◽  
Manuela Caniça
Keyword(s):  
Escherichia Coli ◽  
Antibiotic Resistance ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gallus Gallus ◽  
Coli Strain ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
The Novel ◽  
Sequence Analyses

We report here the draft genome sequence of the CTX-M-166-harboring O6:H16 sequence type 48 (ST48)- fimH 34 Escherichia coli strain recovered from a Gallus gallus broiler. Sequence analyses revealed the presence of an IncI1/ST103-IS Ecp1 - bla CTX-M-166 - orf477 plasmid region and of diverse antibiotic resistance and virulence-acquired genes.

scholarly journals Draft Genome Sequence of the First New Delhi Metallo-β-Lactamase (NDM-1)-Producing Escherichia coli Strain Isolated in Peru

2018 ◽  
Vol 6 (13) ◽  
Author(s):  
Jesus Tamariz ◽  
Carlos Llanos ◽  
Carlos Seas ◽  
Paola Montenegro ◽  
Jose Lagos ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Draft Genome ◽  
Coli Strain ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
New Delhi ◽  
Content Type ◽  
Clinically Significant

ABSTRACT We present here the draft genome sequence of the first New Delhi metallo-β-lactamase (NDM-1)-producing Escherichia coli strain, belonging to sequence type 155 (ST155), isolated in Peru. Assembly of this draft genome resulted in 5,061,184 bp, revealing a clinically significant resistome for β-lactams, aminoglycosides, tetracyclines, phenicols, sulfonamides, trimethoprim, and fluoroquinolones.

scholarly journals Draft Genome Sequence of Extended-Spectrum-β-Lactamase-Producing Escherichia coli Strain CCUG 62462, Isolated from a Urine Sample

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Anna Johnning ◽  
Hedvig E. Jakobsson ◽  
Fredrik Boulund ◽  
Francisco Salvà-Serra ◽  
Edward R. B. Moore ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Urine Sample ◽  
Genome Sequence ◽  
Draft Genome ◽  
Coli Strain ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
Total Size ◽  
E Coli ◽  
Extended Spectrum

The draft genome sequence has been determined for an extended-spectrum-β-lactamase (ESBL)-producing ( bla CTX-M-15 ) Escherichia coli strain (CCUG 62462), composed of 119 contigs and a total size of 5.27 Mb. This E. coli is serotype O25b and sequence type 131, a pandemic clonal group, causing worldwide antimicrobial-resistant infections.

scholarly journals Draft Genome Sequence of a Pathogenic O86:H25 Sequence Type 57 Escherichia coli Strain Isolated from Poultry and Carrying 12 Acquired Antibiotic Resistance Genes

2015 ◽  
Vol 3 (5) ◽  
Author(s):  
Daniela Jones-Dias ◽  
Vera Manageiro ◽  
Daniel Ataíde Sampaio ◽  
Luís Vieira ◽  
Manuela Caniça
Keyword(s):  
Escherichia Coli ◽  
Antibiotic Resistance ◽  
Genome Sequence ◽  
Draft Genome ◽  
Antibiotic Resistance Genes ◽  
Multidrug Resistant ◽  
Coli Strain ◽  
Draft Genome Sequence ◽  
E Coli ◽  
Acquired Antibiotic Resistance

Escherichia coli is a commensal bacterium that is frequently associated with multidrug-resistant zoonotic and foodborne infections. Here, we report the 5.6-Mbp draft genome sequence of an E. coli recovered from poultry, which encodes multiple acquired antibiotic resistance determinants, virulence factors, pathogenicity determinants, and mobile genetic elements.

scholarly journals Draft Genome Sequence of Enterotoxigenic Escherichia coli Strain E24377A, Obtained from a Tribal Drinking Water Source in India

2015 ◽  
Vol 3 (2) ◽  
Author(s):  
Ashok J. Tamhankar ◽  
Sandeep S. Nerkar ◽  
Prashant P. Khadake ◽  
Dadasaheb B. Akolkar ◽  
Sachin R. Apurwa ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Drinking Water ◽  
Genome Sequence ◽  
Draft Genome ◽  
Water Source ◽  
Coli Strain ◽  
Enterotoxigenic Escherichia Coli ◽  
Draft Genome Sequence ◽  
Drinking Water Source

scholarly journals Draft Genome Sequence of an Escherichia coli Sequence Type 410 Isolate Harboring blaNDM-5 Genes with gyrA and parE Mutations, Isolated from Urine Culture in China

2019 ◽  
Vol 8 (50) ◽  
Author(s):  
Junwei Huang ◽  
Shanshan Ma ◽  
Qian Yu ◽  
Miao Fu ◽  
Lingli Shao
Keyword(s):  
Escherichia Coli ◽  
High Risk ◽  
Clinical Isolate ◽  
Genome Sequence ◽  
Urine Culture ◽  
Draft Genome ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
Content Type

Escherichia coli sequence type 410 (ST410) is now an international high-risk clone and is responsible for a large number of clinical infections. Here, we report the draft genome sequence of an ST410 clinical isolate harboring multiple bla NDM-5 genes that was obtained from urine culture in China.

scholarly journals Draft Genome Sequence of an Escherichia coli Sequence Type 420 Isolate from a Patient with Urinary Tract Infection in Northern California

2020 ◽  
Vol 9 (23) ◽  
Author(s):  
Yusuke Matsui ◽  
Yuan Hu ◽  
Nicole J. Tarlton ◽  
Lee W. Riley
Keyword(s):  
Escherichia Coli ◽  
Urinary Tract Infection ◽  
Urinary Tract ◽  
Tract Infection ◽  
Genome Sequence ◽  
Draft Genome ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
Northern California ◽  
Content Type

ABSTRACT The genome sequence of a uropathogenic Escherichia coli sequence type 420 strain isolated from a patient with urinary tract infection in northern California is described here. The draft genome sequence includes a 4.8-Mb chromosome, accompanied by a 114-kb plasmid containing IncFIB/IncFII/Col156 and a 35-kb plasmid containing IncN3.

scholarly journals Draft Genome Sequence of an Escherichia coli O8:H19 Sequence Type 708 Strain Isolated from a Holstein Dairy Cow with Metritis

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Amber Ginn ◽  
Zhengxin Ma ◽  
Klibs N. Galvao ◽  
KwangCheol Casey Jeong
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Dairy Cow ◽  
Draft Genome ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
Uterine Infection ◽  
Virulence Potential ◽  
Holstein Dairy Cow

We present here the genome sequence of Escherichia coli O8:H19 strain KCJ852, belonging to multilocus sequence type (MLST) 708, isolated from the uterus of a cow with a bovine postpartum uterine infection known as metritis. Genomic investigation of KCJ852 will help us understand its virulence potential.

scholarly journals Draft Genome Sequence of Escherichia coli Strain VKPM B-10182, Producing the Enzyme for Synthesis of Cephalosporin Acids

2014 ◽  
Vol 2 (6) ◽  
Author(s):  
A. V. Mardanov ◽  
M. A. Eldarov ◽  
A. V. Sklyarenko ◽  
M. V. Dumina ◽  
A. V. Beletsky ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Draft Genome ◽  
Coli Strain ◽  
Draft Genome Sequence

scholarly journals Draft Genome Sequence of the First NDM-4-Producing Escherichia coli Strain (AK1), Isolated from Sewage Water of a North Indian Hospital

2017 ◽  
Vol 5 (50) ◽  
Author(s):  
Asad U. Khan ◽  
Ayesha Z. Beg ◽  
Praveen K. Verma
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Draft Genome ◽  
Sewage Water ◽  
Coli Strain ◽  
Draft Genome Sequence ◽  
Content Type

ABSTRACT We report here the draft genome sequence of the first isolated NDM-4-producing Escherichia coli strain, isolated from sewage water at a North Indian hospital. The genome has an assembly size of 5,076,053 bp, arranged in 129 contigs, with 5,271 genes and a G+C content of 50.47%.

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