scholarly journals High-Quality Genome Sequence of an Escherichia coli O157 Strain Carrying an mcr-1 Resistance Gene Isolated from a Patient in the United States

2017 ◽  
Vol 5 (11) ◽  
Author(s):  
Rebecca L. Lindsey ◽  
Dhwani Batra ◽  
Lori Rowe ◽  
Vladimir N. Loparev ◽  
Devon Stripling ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Resistance Gene ◽  
Genome Sequence ◽  
The United States ◽  
Whole Genome Sequence ◽  
Escherichia Coli O157 ◽  
High Quality ◽  
O157 Strain ◽  
Content Type ◽  
High Quality Genome

ABSTRACT Enterobacteriaceae carrying plasmid-mediated colistin resistance have been found around the world. We report here the high-quality whole-genome sequence of an Escherichia coli O157:H48 isolate (2016C-3936C1) from Connecticut that carried the mcr-1 resistance gene on an IncX4-type plasmid.

scholarly journals Complete Genome Sequence of Escherichia coli O157:H7 Phage PhiG17

2019 ◽  
Vol 8 (3) ◽  
Author(s):  
Muyiwa A. Akindolire ◽  
Bukola R. Aremu ◽  
Collins N. Ateba
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Whole Genome Sequence ◽  
Escherichia Coli O157 ◽  
Content Type ◽  
North West ◽  
The North ◽  
Genetic Features

Here, we announce the complete genome sequence of bacteriophage PhiG17, which is virulent to Escherichia coli O157:H7 strains and was isolated from cattle feces in the North West province of South Africa. This report presents the major genetic features of the phage PhiG17 based on its whole-genome sequence.

scholarly journals Investigating the Whole-Genome Sequence of a New Locus of Enterocyte Effacement-Positive Shiga Toxin-Producing Escherichia coli O157:H7 Strain Isolated from River Water

2020 ◽  
Vol 9 (12) ◽  
Author(s):  
Yujie Zhang ◽  
Yen-Te Liao ◽  
Alexandra Salvador ◽  
Xiaohong Sun ◽  
Vivian C. H. Wu
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Mississippi River ◽  
Shiga Toxin ◽  
Environmental Samples ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Escherichia Coli O157 ◽  
Content Type ◽  
Enterocyte Effacement

Diverse Shiga toxin-producing Escherichia coli (STEC) strains have been isolated from several environmental samples. Rivers are associated with the distribution of STEC pathogens in the environment. Thus, we report the complete genome sequence of a locus of enterocyte effacement (LEE)-positive STEC O157:H7 strain isolated from the Mississippi River.

scholarly journals Whole-Genome Sequence of Phage-Resistant Strain Escherichia coli DH5α

2018 ◽  
Vol 6 (10) ◽  
Author(s):  
Jingchao Chen ◽  
Yi Li ◽  
Kun Zhang ◽  
Hailei Wang
Keyword(s):  
Escherichia Coli ◽  
Comparative Analysis ◽  
Genome Sequence ◽  
Resistant Strain ◽  
Resistance Mechanism ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
E Coli ◽  
T4 Bacteriophage

ABSTRACT The genomes of many strains of Escherichia coli have been sequenced, as this organism is a classic model bacterium. Here, we report the genome sequence of Escherichia coli DH5α, which is resistant to a T4 bacteriophage (CCTCC AB 2015375), while its other homologous E. coli strains, such as E. coli BL21, DH10B, and MG1655, are not resistant to phage invasions. Thus, understanding of the genome of the DH5α strain, along with comparative analysis of its genome sequence along with other sequences of E. coli strains, may help to reveal the bacteriophage resistance mechanism of E. coli .

scholarly journals Complete High-Quality Genome Sequence of Clostridium limosum (Hathewaya limosa) Isolate 14S0207, Recovered from a Cow with Suspected Blackleg in Germany

2020 ◽  
Vol 9 (2) ◽  
Author(s):  
Prasad Thomas ◽  
Mostafa Y. Abdel-Glil ◽  
Anne Busch ◽  
Lothar H. Wieler ◽  
Inga Eichhorn ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Intestinal Tract ◽  
High Quality ◽  
Circular Chromosome ◽  
Content Type ◽  
High Quality Genome

Clostridium limosum can be found in soil and the intestinal tract of animals. In 2014, C. limosum was isolated from a suspected blackleg outbreak in cattle in Schleswig-Holstein, Germany. We present a complete genome sequence of a C. limosum strain represented by a circular chromosome and three plasmids.

scholarly journals High-Quality Whole-Genome Sequence of an Estradiol-Degrading Strain, Novosphingobium tardaugens NBRC 16725

2019 ◽  
Vol 8 (11) ◽  
Author(s):  
J. Ibero ◽  
D. Sanz ◽  
B. Galán ◽  
E. Díaz ◽  
J. L. García
Keyword(s):  
Genome Sequence ◽  
Complete Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
High Quality ◽  
Content Type ◽  
Pacific Biosciences ◽  
Degrading Bacterium ◽  
The Pacific

In this work we report the complete sequence and assembly of the estradiol-degrading bacterium Novosphingobium tardaugens NBRC 16725 genome into a single contig using the Pacific Biosciences RS II system.

scholarly journals Complete Genome Sequence of a Carbapenem-Resistant Escherichia coli Isolate with blaNDM-5 from a Dog in the United States

2019 ◽  
Vol 8 (34) ◽  
Author(s):  
Gregory H. Tyson ◽  
Cong Li ◽  
Olgica Ceric ◽  
Renate Reimschuessel ◽  
Stephen Cole ◽  
...  
Keyword(s):  
United States ◽  
Escherichia Coli ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Carbapenem Resistance ◽  
The United States ◽  
Multidrug Resistant ◽  
Content Type ◽  
E Coli

The carbapenem resistance gene bla NDM-5 was identified in an Escherichia coli strain isolated from a dog. We report here the complete genome sequence of this E. coli strain; the bla NDM-5 gene was present on a large IncFII multidrug-resistant plasmid. This is the first bla NDM-5-carrying E. coli strain from an animal in the United States.

scholarly journals Complete Genome Sequence of the Industrial Strain Bacillus megaterium WSH-002

2011 ◽  
Vol 193 (22) ◽  
pp. 6389-6390 ◽  
Author(s):  
Liming Liu ◽  
Yang Li ◽  
Jing Zhang ◽  
Wei Zou ◽  
Zhemin Zhou ◽  
...  
Keyword(s):  
Vitamin C ◽  
Genome Sequence ◽  
Bacillus Megaterium ◽  
Complete Genome Sequence ◽  
Protein Production ◽  
Industrial Strain ◽  
High Quality ◽  
Content Type ◽  
Ketogulonicigenium Vulgare ◽  
High Quality Genome

Bacillus megaterium, an industrial strain, has been widely used in protein production and the vitamin C industry. Here we reported a finished, annotated, and compared 4.14-Mbp high-quality genome sequence ofB. megateriumWSH-002, which is the companion strain forKetogulonicigenium vulgarein the vitamin C industry and is stocked in our laboratory.

scholarly journals Whole-Genome Sequence of Salmonella enterica subsp. enterica Serovar Typhimurium Strain WG49 and Escherichia coli Strain WG5 Used in South Africa for Phage Detection in Water Samples

2018 ◽  
Vol 6 (26) ◽  
Author(s):  
L. Bothma ◽  
D. Gonzalez-Ibeas ◽  
C. Mienie ◽  
C. C. Bezuidenhout ◽  
R. Adeleke
Keyword(s):  
Escherichia Coli ◽  
South Africa ◽  
Genome Sequence ◽  
Water Samples ◽  
Salmonella Enterica ◽  
Coli Strain ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Serovar Typhimurium

Salmonella enterica subsp. enterica serovar Typhimurium WG49 is widely used for enumeration of F-specific RNA (F-RNA) coliphages in water.

scholarly journals High-Quality Genome Sequence of Bacillus anthracis Strain 14RA5914 Isolated during an Outbreak in Germany in 2014

2017 ◽  
Vol 5 (40) ◽  
Author(s):  
Mandy C. Elschner ◽  
Anne Busch ◽  
Annette Schliephake ◽  
Wolfgang Gaede ◽  
Eric Zuchantke ◽  
...  
Keyword(s):  
Bacillus Anthracis ◽  
Genome Sequence ◽  
Notifiable Disease ◽  
High Quality ◽  
Content Type ◽  
High Quality Genome

ABSTRACT Bacillus anthracis is a zoonotic agent causing anthrax, a notifiable disease in animals. The last anthrax outbreak among cattle in Germany occurred in April 2014 in Saxony-Anhalt. Here we report a high-quality genome sequence of the Bacillus anthracis strain 14RA5914 Dobichau isolated from the spleen of a dead cow.

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