scholarly journals Virome Analysis of Amblyomma americanum, Dermacentor variabilis, and Ixodes scapularis Ticks Reveals Novel Highly Divergent Vertebrate and Invertebrate Viruses

2014 ◽  
Vol 88 (19) ◽  
pp. 11480-11492 ◽  
Author(s):  
R. Tokarz ◽  
S. H. Williams ◽  
S. Sameroff ◽  
M. Sanchez Leon ◽  
K. Jain ◽  
...  
Insects ◽  
2019 ◽  
Vol 10 (7) ◽  
pp. 190 ◽  
Author(s):  
William H. Kessler ◽  
Claudia Ganser ◽  
Gregory E. Glass

The lone star (Amblyomma americanum), black-legged (Ixodes scapularis) and American dog ticks (Dermacentor variabilis) are species of great public health importance as they are competent vectors of several notable pathogens. While the regional distributions of these species are well characterized, more localized distribution estimates are sparse. We used records of field collected ticks and an ensemble modeling approach to predict habitat suitability for each of these species in Florida. Environmental variables capturing climatic extremes were common contributors to habitat suitability. Most frequently, annual precipitation (Bio12), mean temperature of the driest quarter (Bio9), minimum temperature of the coldest month (Bio6), and mean Normalized Difference Vegetation Index (NDVI) were included in the final models for each species. Agreement between the modeling algorithms used in this study was high and indicated the distribution of suitable habitat for all three species was reduced at lower latitudes. These findings are important for raising awareness of the potential for tick-borne pathogens in Florida.


Author(s):  
Madeline P Seagle ◽  
Maximilian R Vierling ◽  
Ryan J Almeida ◽  
D Jacob Clary ◽  
Will Hidell ◽  
...  

Abstract Multiple species of ticks, including Ixodes scapularis (Say, Ixodida:Ixodidae), Amblyomma americanum (L., Ixodida:Ixodidae), and Dermacentor variabilis (Say, Ixodida:Ixodidae), occur in high and increasing abundance in both the northeast and southeast United States. North Carolina is at the nexus of spread of these species, with high occurrence and abundance of I. scapularis to the north and A. americanum to the south. Despite this, there are few records of these species in the Piedmont of North Carolina, including the greater Charlotte metropolitan area. Here, we update the known occurrence and abundance of these species in the North Carolina Piedmont. We surveyed for ticks using cloth drags, CO2 traps, and leaf litter samples at a total of 79 sites within five locations: Mecklenburg County, South Mountains State Park, Stone Mountain State Park, Duke Forest, and Morrow Mountain State Park, all in North Carolina, during the late spring, summer, and fall seasons of 2019. From these surveys, we had only 20 tick captures, illuminating the surprisingly low abundance of ticks in this region of North Carolina. Our results indicate the possibility of underlying habitat and host factors limiting tick distribution and abundance in the North Carolina Piedmont.


2004 ◽  
Vol 39 (3) ◽  
pp. 426-432 ◽  
Author(s):  
Alan B. Wells ◽  
Lance A. Durden ◽  
John H. Smoyer

Ticks (Acari: Ixodidae) were collected from family-owned domestic dogs, Canis familiaris L., in Bulloch Co., GA, from 1996 to 2003 and from dogs maintained in a shelter in Emanuel Co., GA, in 2002 and 2003. A total of 2,466 ticks representing 9 species was recovered. The most frequently recovered species from family-owned dogs were the blacklegged tick, Ixodes scapularis Say (54.6% of all ticks from this group of dogs), and American dog tick, Dermacentor variabilis (Say) (27.7%). Collections from shelter-maintained dogs were dominated by the brown dog tick, Rhipicephalus sanguineus (Latreille) (73.6%). Except for 39 nymphs of the lone star tick, Amblyomma americanum (L.), 12 nymphs of R. sanguineus, 7 nymphs of the Gulf Coast tick, Amblyomma maculatum Koch, 1 nymph of D. variabilis and 72 larvae of the gopher tortoise tick, Amblyomma tuberculatum Marx, only adult ticks were present. Seasonally, I. scapularis adults were recorded from October through May and were most common in the fall; whereas, A. americanum, A. maculatum, A. tuberculatum, D. variabilis, and Ixodes affinis Neumann were all found only during the spring, summer and/or early fall. Two species of ticks collected during this study, A. tuberculatum and I. affinis, have Coastal Plain distributions in the southern U.S. and would only be expected to parasitize dogs within this region.


mSphere ◽  
2018 ◽  
Vol 3 (2) ◽  
Author(s):  
Rafal Tokarz ◽  
Stephen Sameroff ◽  
Teresa Tagliafierro ◽  
Komal Jain ◽  
Simon H. Williams ◽  
...  

ABSTRACT Ticks carry a wide range of known human and animal pathogens and are postulated to carry others with the potential to cause disease. Here we report a discovery effort wherein unbiased high-throughput sequencing was used to characterize the virome of 2,021 ticks, including Ixodes scapularis ( n = 1,138), Amblyomma americanum ( n = 720), and Dermacentor variabilis ( n = 163), collected in New York, Connecticut, and Virginia in 2015 and 2016. We identified 33 viruses, including 24 putative novel viral species. The most frequently detected viruses were phylogenetically related to members of the Bunyaviridae and Rhabdoviridae families, as well as the recently proposed Chuviridae . Our work expands our understanding of tick viromes and underscores the high viral diversity that is present in ticks. IMPORTANCE The incidence of tick-borne disease is increasing, driven by rapid geographical expansion of ticks and the discovery of new tick-associated pathogens. The examination of the tick microbiome is essential in order to understand the relationship between microbes and their tick hosts and to facilitate the identification of new tick-borne pathogens. Genomic analyses using unbiased high-throughput sequencing platforms have proven valuable for investigations of tick bacterial diversity, but the examination of tick viromes has historically not been well explored. By performing a comprehensive virome analysis of the three primary tick species associated with human disease in the United States, we gained substantial insight into tick virome diversity and can begin to assess a potential role of these viruses in the tick life cycle.


PLoS ONE ◽  
2021 ◽  
Vol 16 (12) ◽  
pp. e0260622
Author(s):  
Lennart Justen ◽  
Duncan Carlsmith ◽  
Susan M. Paskewitz ◽  
Lyric C. Bartholomay ◽  
Gebbiena M. Bron

Ticks and tick-borne diseases represent a growing public health threat in North America and Europe. The number of ticks, their geographical distribution, and the incidence of tick-borne diseases, like Lyme disease, are all on the rise. Accurate, real-time tick-image identification through a smartphone app or similar platform could help mitigate this threat by informing users of the risks associated with encountered ticks and by providing researchers and public health agencies with additional data on tick activity and geographic range. Here we outline the requirements for such a system, present a model that meets those requirements, and discuss remaining challenges and frontiers in automated tick identification. We compiled a user-generated dataset of more than 12,000 images of the three most common tick species found on humans in the U.S.: Amblyomma americanum, Dermacentor variabilis, and Ixodes scapularis. We used image augmentation to further increase the size of our dataset to more than 90,000 images. Here we report the development and validation of a convolutional neural network which we call “TickIDNet,” that scores an 87.8% identification accuracy across all three species, outperforming the accuracy of identifications done by a member of the general public or healthcare professionals. However, the model fails to match the performance of experts with formal entomological training. We find that image quality, particularly the size of the tick in the image (measured in pixels), plays a significant role in the network’s ability to correctly identify an image: images where the tick is small are less likely to be correctly identified because of the small object detection problem in deep learning. TickIDNet’s performance can be increased by using confidence thresholds to introduce an “unsure” class and building image submission pipelines that encourage better quality photos. Our findings suggest that deep learning represents a promising frontier for tick identification that should be further explored and deployed as part of the toolkit for addressing the public health consequences of tick-borne diseases.


Author(s):  
E A Bacon ◽  
H Kopsco ◽  
P Gronemeyer ◽  
N Mateus-Pinilla ◽  
R L Smith

Abstract The range of ticks in North America has been steadily increasing likely, in part, due to climate change. Along with it, there has been a rise in cases of tick-borne disease. Among those medically important tick species of particular concern are Ixodes scapularis Say (Acari: Ixodidae), Dermacentor variabilis Say (Acari: Ixodidae), and Amblyomma americanum Linneaus (Acari: Ixodidae). The aim of this study was to determine if climate factors explain existing differences in abundance of the three aforementioned tick species between two climatically different regions of Illinois (Central and Southern), and if climate variables impact each species differently. We used both zero-inflated regression approaches and Bayesian network analyses to assess relationships among environmental variables and tick abundance. Results suggested that the maximum average temperature and total precipitation are associated with differential impact on species abundance and that this difference varied by region. Results also reinforced a differential level of resistance to desiccation among these tick species. Our findings help to further define risk periods of tick exposure for the general public, and reinforce the importance of responding to each tick species differently.


PLoS ONE ◽  
2021 ◽  
Vol 16 (11) ◽  
pp. e0259769
Author(s):  
Ram K. Raghavan ◽  
Zoe L. Koestel ◽  
Gunavanthi Boorgula ◽  
Ali Hroobi ◽  
Roman Ganta ◽  
...  

Unexpected questing activity of ticks was noted during the winter months of January and February in the Central Midwestern states of Kansas, Missouri, Oklahoma, and Arkansas. From nine geographically distinct locations, four species of ticks were collected using the flagging method, of which the lone star tick, Amblyomma americanum, was most abundant, followed by the American dog tick, Dermacentor variabilis, the Gulf coast tick, Amblyomma maculatum, and the Black legged tick, Ixodes scapularis. More A. americanum nymphs were caught questing than male or female adults. The winter activity of these medically important ticks in this region poses concern for public health and offers an insight into future tick activity in light of ongoing climate change. More studies on the seasonality of these tick species, and how different climate parameters affect their seasonal activity in this region are warranted and would be expected to benefit for both human and veterinary medicine.


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