scholarly journals Selectively Receptor-Blind Measles Viruses: Identification of Residues Necessary for SLAM- or CD46-Induced Fusion and Their Localization on a New Hemagglutinin Structural Model

2004 ◽  
Vol 78 (1) ◽  
pp. 302-313 ◽  
Author(s):  
Sompong Vongpunsawad ◽  
Numan Oezgun ◽  
Werner Braun ◽  
Roberto Cattaneo

ABSTRACT Measles virus (MV) enters cells either through the signaling lymphocyte activation molecule SLAM (CD150) expressed only in immune cells or through the ubiquitously expressed regulator of complement activation, CD46. To identify residues on the attachment protein hemagglutinin (H) essential for fusion support through either receptor, we devised a strategy based on analysis of morbillivirus H-protein sequences, iterative cycles of mutant protein production followed by receptor-based functional assays, and a novel MV H three-dimensional model. This model uses the Newcastle disease virus hemagglutinin-neuraminidase protein structure as a template. We identified seven amino acids important for SLAM- and nine for CD46 (Vero cell receptor)-induced fusion. The MV H three-dimensional model suggests (i) that SLAM- and CD46-relevant residues are located in contiguous areas in propeller β-sheets 5 and 4, respectively; (ii) that two clusters of SLAM-relevant residues exist and that they are accessible for receptor contact; and (iii) that several CD46-relevant amino acids may be shielded from direct receptor contacts. It appears likely that certain residues support receptor-specific H-protein conformational changes. To verify the importance of the H residues identified with the cell-cell fusion assays for virus entry into cells, we transferred the relevant mutations into genomic MV cDNAs. Indeed, we were able to recover recombinant viruses, and we showed that these replicate selectively in cells expressing SLAM or CD46. Selectively receptor-blind viruses will be used to study MV pathogenesis and may have applications for the production of novel vaccines and therapeutics.

2003 ◽  
Vol 373 (1) ◽  
pp. 41-48 ◽  
Author(s):  
Jean-Guy BERRIN ◽  
Mirjam CZJZEK ◽  
Paul A. KROON ◽  
W. Russell MCLAUCHLAN ◽  
Antoine PUIGSERVER ◽  
...  

Human cytosolic β-glucosidase (hCBG) is a xenobiotic-metabolizing enzyme that hydrolyses certain flavonoid glucosides, with specificity depending on the aglycone moiety, the type of sugar and the linkage between them. Based upon the X-ray structure of Zea mays β-glucosidase, we generated a three-dimensional model of hCBG by homology modelling. The enzyme exhibited the (β/α)8-barrel fold characteristic of family 1 β-glucosidases, with structural differences being confined mainly to loop regions. Based on the substrate specificity of the human enzymes, sequence alignment of family 1 enzymes and analysis of the hCBG structural model, we selected and mutated putative substrate (aglycone) binding site residues. Four single mutants (Val168→Tyr, Phe225→Ser, Tyr308→Ala and Tyr308→Phe) were expressed in Pichia pastoris, purified and characterized. All mutant proteins showed a decrease in activity towards a broad range of substrates. The Val168→Tyr mutation did not affect Km on p-nitrophenyl (pNP)-glycosides, but increased Km 5-fold on flavonoid glucosides, providing the first biochemical evidence supporting a role for this residue in aglycone-binding of the substrate, a finding consistent with our three-dimensional model. The Phe225→Ser and Tyr308→Ala mutations, and, to a lesser degree, the Tyr308→Phe mutation, resulted in a drastic decrease in specific activities towards all substrates tested, indicating an important role of those residues in catalysis. Taken together with the three-dimensional model, these mutation studies identified the amino-acid residues in the aglycone-binding subsite of hCBG that are essential for flavonoid glucoside binding and catalysis.


Open Biology ◽  
2014 ◽  
Vol 4 (6) ◽  
pp. 140070 ◽  
Author(s):  
Manuel Sanguinetti ◽  
Sotiris Amillis ◽  
Sergio Pantano ◽  
Claudio Scazzocchio ◽  
Ana Ramón

We present the first account of the structure–function relationships of a protein of the subfamily of urea/H + membrane transporters of fungi and plants, using Aspergillus nidulans UreA as a study model. Based on the crystal structures of the Vibrio parahaemolyticus sodium/galactose symporter (vSGLT) and of the Nucleobase-Cation-Symport-1 benzylhydantoin transporter from Microbacterium liquefaciens (Mhp1), we constructed a three-dimensional model of UreA which, combined with site-directed and classical random mutagenesis, led to the identification of amino acids important for UreA function. Our approach allowed us to suggest roles for these residues in the binding, recognition and translocation of urea, and in the sorting of UreA to the membrane. Residues W82, Y106, A110, T133, N275, D286, Y388, Y437 and S446, located in transmembrane helixes 2, 3, 7 and 11, were found to be involved in the binding, recognition and/or translocation of urea and the sorting of UreA to the membrane. Y106, A110, T133 and Y437 seem to play a role in substrate selectivity, while S446 is necessary for proper sorting of UreA to the membrane. Other amino acids identified by random classical mutagenesis (G99, R141, A163, G168 and P639) may be important for the basic transporter's structure, its proper folding or its correct traffic to the membrane.


Author(s):  
O. Klipkova ◽  
N. Kozmuk ◽  
O. Tsebenko

Abstract. The materials of the article focus on offering an aggregate approach to personnel management since it is the most important factor in ensuring the success of business structures. The aim of the study is to form a structural model of personnel management based on the application of the three-dimensional approach «employee — enterprise — external conditions», the theory of generations and the vector system of aspects of ethical issues in business. The study revealed a causal relationship between the behavioral characteristics of the generation and the tools of personnel management, in terms of a particular market situation, the stage of the business cycle and the level of perception of the postulates of the enterprise corporate structure. A network model of the ratio of employee and means of production based on the implementation of foreign methods of personnel management was patterned and a vector system of aspects of ethical issues in business was suggested thus ensuring the implementation of the principles of ethical behavior and universal morality. The method of economic experiment (to form a three-dimensional model of personnel management system), the method of scientific abstraction (to determine the main factors of model formation), and the method of dialectics (to determine the vectors of ethical problems in business), the method of comparison (to study the foreign experience in personnel management),  the method of analysis and synthesis (to form the foundations of a new paradigm of personnel management based on the theory of generations), graphic method (to create network and vector systems) and statistical method (to identify countries determined by advanced results of progressive human-oriented management techniques) were used in the article. The outcome of the research is the creation of a structural generalized model of personnel management, which will ensure high efficiency of management methods in changing environmental conditions based on a personal approach to the employee as the representative of a certain generation. Further research will be related to the specification of each point of the three-dimensional model in a definite coordinate system, in order to use a certain theory of leadership and the principles of teamwork so to effectively manage the personnel of the enterprise. Keywords: enterprise personnel, generation theory, personnel management tools, corporate culture. JEL Classification M12 Formulas: 0; fig.: 4; tabl.: 3; bibl.: 22.


1993 ◽  
Vol 265 (5) ◽  
pp. R982-R989 ◽  
Author(s):  
M. G. Achen ◽  
W. Duan ◽  
T. M. Pettersson ◽  
P. J. Harms ◽  
S. J. Richardson ◽  
...  

The presence of transthyretin in mammals and birds, but not amphibia, suggested that transthyretin expression first appeared in stem reptiles. Therefore, transthyretin synthesis was studied in a lizard. Transthyretin synthesis in choroid plexus pieces from Tiliqua rugosa was demonstrated by incorporation of radiactive amino acids. Oligonucleotides corresponding to conserved regions of transthyretin were used as primers in polymerase chain reaction with lizard choroid plexus cDNA. Amplified DNA was used to screen a lizard choroid plexus cDNA library. A full-length transthyretin cDNA clone was isolated and sequenced. A three-dimensional model of lizard transthyretin was obtained by homology modeling. The central channel of transthyretin, containing the thyroxine-binding site, was found to be completely conserved between reptiles and mammals. Transthyretin expression was not detected in lizard liver. These data suggest that transthyretin first evolved in the choroid plexus of the brain. Due to a change in tissue distribution of gene expression, occurring much later during evolution, transthyretin also became a plasma protein, synthesized in the liver.


Skull Base ◽  
2008 ◽  
Vol 18 (S 01) ◽  
Author(s):  
Akio Morita ◽  
Toshikazu Kimura ◽  
Shigeo Sora ◽  
Kengo Nishimura ◽  
Hisayuki Sugiyama ◽  
...  

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