scholarly journals Draft Genome Sequences of Two Strains of Bifidobacterium dentium Isolated from a Crude Fecal Extract Used for Fecal Microbiota Transplantation in the Republic of Korea

2020 ◽  
Vol 9 (23) ◽  
Author(s):  
Erin Simpson ◽  
Fatemeh Sanjar ◽  
Dennis Wylie ◽  
Sowon Park ◽  
Hong Koh ◽  
...  
Keyword(s):  
Fecal Microbiota Transplantation ◽  
Draft Genome ◽  
Fecal Microbiota ◽  
Republic Of Korea ◽  
Human Intestine ◽  
Genome Sequences ◽  
Content Type ◽  
Fecal Extract ◽  
The Republic ◽  
Functional Analyses

ABSTRACT We present the draft genome sequences of two Bifidobacterium dentium strains isolated from a fecal extract for fecal microbiota transplantation at a hospital in the Republic of Korea. Phylogenetic and functional analyses were performed to understand the physiological characteristics and functions of Bifidobacterium spp. in the human intestine.

scholarly journals Draft Genome Sequence of Pediococcus pentosaceus Strain FBL2, a Probiotic Bacterium Isolated from Jogaejeot, a Salted Fermented Food, in the Republic of Korea

2017 ◽  
Vol 5 (18) ◽  
Author(s):  
Eiseul Kim ◽  
Jae-Hwan Kim ◽  
Saet-Byul Park ◽  
Mi-ju Kim ◽  
Hyun-Joong Kim ◽  
...  
Keyword(s):  
Lactic Acid ◽  
Lactic Acid Bacterium ◽  
Genome Size ◽  
Draft Genome ◽  
Probiotic Bacterium ◽  
Fermented Food ◽  
Republic Of Korea ◽  
Pediococcus Pentosaceus ◽  
Content Type ◽  
The Republic

ABSTRACT Pediococcus pentosaceus strain FBL2 is a lactic acid bacterium isolated in the Republic of Korea from jogaejeot, a salted fermented food made with shellfish. P. pentosaceus strain FBL2 comprised 54 contigs (≥1 kb) and had a total draft genome size of 1,934,229 bp with a G+C content of 37.2%.

scholarly journals Draft Genome Sequences of 25 Listeria monocytogenes Isolates Associated with Human Clinical Listeriosis in Ireland

2017 ◽  
Vol 5 (19) ◽  
Author(s):  
Amy O’Callaghan ◽  
Amber Hilliard ◽  
Ciara A. Morgan ◽  
Eamonn P. Culligan ◽  
Dara Leong ◽  
...  
Keyword(s):  
Listeria Monocytogenes ◽  
Causative Agent ◽  
Draft Genome ◽  
Opportunistic Pathogen ◽  
Genome Sequences ◽  
Gram Positive ◽  
Content Type ◽  
Republic Of Ireland ◽  
The Republic

ABSTRACT Listeria monocytogenes is a Gram-positive opportunistic pathogen that is the causative agent of listeriosis. Here, we report the draft genome sequences of 25 L. monocytogenes strains isolated from patients with clinical listeriosis in the Republic of Ireland between 2013 and 2015.

scholarly journals Draft Genome Sequence of Tetragenococcus halophilus Strain FBL3, a Probiotic Bacterium Isolated from Galchijeot, a Salted Fermented Food, in the Republic of Korea

2017 ◽  
Vol 5 (18) ◽  
Author(s):  
Eiseul Kim ◽  
Jae-Hwan Kim ◽  
Seung-Min Yang ◽  
Seung-Man Suh ◽  
Hyun-Joong Kim ◽  
...  
Keyword(s):  
Lactic Acid ◽  
Lactic Acid Bacterium ◽  
Draft Genome ◽  
Probiotic Bacterium ◽  
Fermented Food ◽  
Republic Of Korea ◽  
Total Size ◽  
Content Type ◽  
Tetragenococcus Halophilus ◽  
The Republic

ABSTRACT Tetragenococcus halophilus strain FBL3 is a lactic acid bacterium isolated from galchijeot, a fermented food made from the salted guts of the hairtail fish, in the Republic of Korea. The draft genome of T. halophilus strain FBL3 comprised 87 contigs (≥1 kb) with a total size of 2,420,904 bp and a G+C content of 38.5%.

scholarly journals Genome Sequences of Two Cyanobacterial Strains, Toxic Green Microcystis aeruginosa KW (KCTC 18162P) and Nontoxic Brown Microcystis sp. Strain MC19, under Xenic Culture Conditions

2018 ◽  
Vol 6 (18) ◽  
Author(s):  
Haeyoung Jeong ◽  
Seong-Jun Chun ◽  
Ankita Srivastava ◽  
Yingshun Cui ◽  
So-Ra Ko ◽  
...  
Keyword(s):  
Water Quality ◽  
Microcystis Aeruginosa ◽  
Complete Genome ◽  
Culture Conditions ◽  
Republic Of Korea ◽  
Genome Sequences ◽  
Content Type ◽  
The Republic

ABSTRACT Bloom-forming cyanobacteria pose concerns for the environment and the health of humans and animals by producing toxins and thus lowering water quality. Here, we report near-complete genome sequences of two Microcystis strains under xenic culture conditions, which were originally isolated from two separate freshwater reservoirs from the Republic of Korea.

scholarly journals Draft Genome Sequence of Deefgea sp. Strain CFH1-16, Isolated from the Intestine of the Freshwater Fish Hypomesus nipponensis

2021 ◽  
Vol 10 (19) ◽  
Author(s):  
Ji-Hye Han
Keyword(s):  
Freshwater Fish ◽  
Genome Sequence ◽  
Draft Genome ◽  
Republic Of Korea ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Genome Data ◽  
Fish Intestine ◽  
The Republic

ABSTRACT Reported here is the draft genome sequence of Deefgea sp. strain CFH1-16, isolated from the intestine of a Hypomesus nipponensis fish collected from the Republic of Korea. The genome sequence was assembled into two contigs with 48.2% G+C content. These genome data could improve our understanding of adaptation in the fish intestine.

scholarly journals Draft Genome Sequences of 12 Mycolicibacterium smegmatis Strains Resistant to Imidazo[1,2-b][1,2,4,5]Tetrazines

2019 ◽  
Vol 8 (16) ◽  
Author(s):  
Aleksey A. Vatlin ◽  
Kirill V. Shur ◽  
Valery N. Danilenko ◽  
Dmitry A. Maslov
Keyword(s):  
Draft Genome ◽  
Transcriptional Repressor ◽  
Antituberculosis Drug ◽  
Genome Sequences ◽  
Content Type ◽  
Drug Candidates

Here, we report 12 draft genome sequences of mutant Mycolicibacterium smegmatis strains resistant to imidazo[1,2-b][1,2,4,5]tetrazines, which are antituberculosis drug candidates. We have identified 7 different mutations in the MSMEG_1380 gene, which encodes the AcrR/TetR_N transcriptional repressor, which may activate efflux-mediated resistance.

scholarly journals Draft Genome Sequences of Three Flavobacterium psychrophilum Strains Isolated from Diseased Ayu (Plecoglossus altivelis altivelis) Caught at Three Sites in the Kagami River in Kochi, Japan

2019 ◽  
Vol 8 (34) ◽  
Author(s):  
Hazuki Yamashita ◽  
Takayuki Wada ◽  
Yusuke Kato ◽  
Takuji Ikeda ◽  
Masayuki Imajoh
Keyword(s):  
Draft Genome ◽  
Psychrophilic Bacterium ◽  
Genome Sequences ◽  
Plecoglossus Altivelis ◽  
Gram Negative ◽  
Content Type ◽  
Flavobacterium Psychrophilum ◽  
Skin Ulcers ◽  
The Family

Flavobacterium psychrophilum is a Gram-negative, psychrophilic bacterium within the family Flavobacteriaceae. Here, we report the draft genome sequences of three F. psychrophilum strains isolated from skin ulcers of diseased ayu caught by tomozuri angling at three sites in the Kagami River in Japan.

scholarly journals Draft Genome Sequences of Escherichia coli Strains FP2 and FP3, Isolated from the Canada Goose (Branta canadensis)

2018 ◽  
Vol 7 (9) ◽  
Author(s):  
Allison L. Denny ◽  
Susan E. Arruda
Keyword(s):  
Escherichia Coli ◽  
Draft Genome ◽  
Branta Canadensis ◽  
Canada Goose ◽  
Genome Sequences ◽  
Content Type

Draft genomes of two strains of Escherichia coli, FP2 and FP3, isolated from the feces of the Canada goose (Branta canadensis), were sequenced. Genome sizes were 5.26 Mb with a predicted G+C content of 50.54% (FP2) and 5.07 Mb with a predicted G+C content of 50.41% (FP3).

scholarly journals First Draft Genome Sequences of Malaysian Clinical Isolates of Corynebacterium diphtheriae

2017 ◽  
Vol 5 (9) ◽  
Author(s):  
Norazah Ahmad ◽  
Shirley Yi Fen Hii ◽  
Mohd Khairul Nizam Mohd Khalid ◽  
Muhammad Adib Abd Wahab ◽  
Rohaidah Hashim ◽  
...  
Keyword(s):  
Draft Genome ◽  
Corynebacterium Diphtheriae ◽  
Clinical Isolates ◽  
Genome Sequences ◽  
Content Type

ABSTRACT Corynebacterium diphtheriae has caused multiple isolated diphtheria cases in Malaysia over the years. Here, we report the first draft genome sequences of 15 Malaysia C. diphtheriae clinical isolates collected from the years 1981 to 2016.

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