scholarly journals Complete Genome Sequence of a Canadian Strain of Raoultella planticola with Metal and Antimicrobial Resistance Genes

2021 ◽  
Vol 10 (25) ◽  
Author(s):  
Mingsong Kang ◽  
John Chmara ◽  
Sohail Naushad ◽  
Hongsheng Huang
Keyword(s):  
Antimicrobial Resistance ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Bacterial Pathogen ◽  
Gene Clusters ◽  
Metal Resistance ◽  
Raoultella Planticola ◽  
Content Type ◽  
Antimicrobial Resistance Genes

Raoultella planticola is a Gram-negative opportunistic bacterial pathogen associated with hospital-acquired infections in humans. Here, we report the complete genome sequence of one Raoultella planticola strain isolated from Canadian wastewater treatment facilities containing one chromosome and four plasmids with four antimicrobial resistance (AMR) genes and four metal resistance gene clusters.

scholarly journals Complete Genome Sequence of an mcr-10- Possessing Enterobacter roggenkampii Strain Isolated from a Dog in Japan

2021 ◽  
Vol 10 (30) ◽  
Author(s):  
Toyotaka Sato ◽  
Masaru Usui ◽  
Kazuki Harada ◽  
Yukari Fukushima ◽  
Chie Nakajima ◽  
...  
Keyword(s):  
Antimicrobial Resistance ◽  
Genome Sequence ◽  
Resistance Genes ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Content Type ◽  
Antimicrobial Resistance Genes

The complete genome sequence of mcr-10 -possessing Enterobacter roggenkampii En37, isolated from a dog in Japan was determined. mcr-10 was located on a 70,277-bp IncFIB plasmid without any additional antimicrobial resistance genes.

scholarly journals Complete Genome Sequence of Bacillus paralicheniformis MDJK30, a Plant Growth-Promoting Rhizobacterium with Antifungal Activity

2017 ◽  
Vol 5 (25) ◽  
Author(s):  
Yun Wang ◽  
Hu Liu ◽  
Kai Liu ◽  
Chengqiang Wang ◽  
Hailin Ma ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Root Rot ◽  
Complete Genome ◽  
Gene Clusters ◽  
Content Type ◽  
Bacillus Paralicheniformis ◽  
Plant Growth Promoting ◽  
Growth Promoting ◽  
Metabolism Gene

ABSTRACT Bacillus paralicheniformis MDJK30 was isolated from the rhizosphere of a peony. It could control the pathogen of peony root rot. Here, we report the complete genome sequence of B. paralicheniformis MDJK30. Eleven secondary metabolism gene clusters were predicted.

scholarly journals Complete Genome Sequence of Acinetobacter radioresistens Strain LH6, a Multidrug-Resistant Bacteriophage-Propagating Strain

2018 ◽  
Vol 7 (5) ◽  
Author(s):  
Clay S. Crippen ◽  
Steven Huynh ◽  
William G. Miller ◽  
Craig T. Parker ◽  
Christine M. Szymanski
Keyword(s):  
Antimicrobial Resistance ◽  
Acinetobacter Baumannii ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Related Species ◽  
Complete Genome ◽  
Multidrug Resistant ◽  
Drug Resistant ◽  
Content Type ◽  
Resistance Determinants

Antimicrobial resistance is a major problem worldwide. Understanding the interplay between drug-resistant pathogens, such as Acinetobacter baumannii and related species, potentially acting as environmental reservoirs is critical for preventing the spread of resistance determinants.

scholarly journals Complete Genome Sequence of Ichthyobacterium seriolicida JBKA-6T, Isolated from Yellowtail (Seriola quinqueradiata) Affected by Bacterial Hemolytic Jaundice

2017 ◽  
Vol 5 (6) ◽  
Author(s):  
Tomokazu Takano ◽  
Yoji Nakamura ◽  
Tomomasa Matsuyama ◽  
Takamitsu Sakai ◽  
Yuya Shigenobu ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Bacterial Pathogen ◽  
Content Type ◽  
Seriola Quinqueradiata

ABSTRACT Ichthyobacterium seriolicida is a fish bacterial pathogen that causes hemolytic jaundice in farmed yellowtail in Japan. To understand more about the characteristics of this bacterium, we determined its complete genome sequence. Two hemolysin genes which may be important for its pathogenicity were identified in the I. seriolicida genome.

scholarly journals Complete Genome Sequence of Mycoplasma bovis Strain 08M

2017 ◽  
Vol 5 (19) ◽  
Author(s):  
Shengli Chen ◽  
Huafang Hao ◽  
Ping Zhao ◽  
Pengcheng Gao ◽  
Ying He ◽  
...  
Keyword(s):  
Respiratory Disease ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Bacterial Pathogen ◽  
Mycoplasma Bovis ◽  
Content Type

ABSTRACT Mycoplasma bovis is a major bacterial pathogen that can cause respiratory disease, mastitis, and arthritis in cattle. We report here the complete and annotated genome sequence of M. bovis strain 08M, isolated from a calf lung with pneumonia in China.

scholarly journals Complete Genome Sequence of the Cytokinin-Producing Biocontrol Strain Pseudomonas fluorescens G20-18

2021 ◽  
Vol 10 (30) ◽  
Author(s):  
Tue K. Nielsen ◽  
Mengistu F. Mekureyaw ◽  
Lars H. Hansen ◽  
Mette H. Nicolaisen ◽  
Thomas G. Roitsch ◽  
...  
Keyword(s):  
Plant Growth ◽  
Pseudomonas Fluorescens ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gene Clusters ◽  
Circular Chromosome ◽  
Content Type ◽  
Plant Growth Promoting ◽  
Growth Promoting

Here, we report the complete genome sequence of the cytokinin-producing plant growth-promoting strain Pseudomonas fluorescens G20-18. The complete genome assembly resulted in a single, circular chromosome of 6.48 Mbp and harbors several secondary metabolite biosynthesis gene clusters that are potentially involved in its plant growth-promoting function.

scholarly journals Complete Genome Sequence of Lactobacillus plantarum subsp. plantarum Strain LB1-2, Isolated from the Hindgut of European Honeybees, Apis mellifera L., from the Philippines

2018 ◽  
Vol 6 (14) ◽  
Author(s):  
M. Fatima C. Ilagan-Cruzada ◽  
Albert Remus R. Rosana ◽  
Andrew D. Montecillo ◽  
Noel G. Sabino ◽  
Ida F. Dalmacio
Keyword(s):  
Apis Mellifera ◽  
Lactobacillus Plantarum ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gene Clusters ◽  
The Philippines ◽  
Gram Negative Bacteria ◽  
Gram Negative ◽  
Content Type

ABSTRACT Lactobacillus plantarum subsp. plantarum strain LB1-2, isolated from the hindgut of European honeybees in the Philippines, is active against Paenibacillus larvae and has broad activity against several Gram-positive and Gram-negative bacteria. The complete genome sequence reported herein contains gene clusters for multiple bacteriocins and extensive gene inventories for carbohydrate metabolism.

scholarly journals Complete Genome Sequence of Moraxella catarrhalis Strain CCRI-195ME, Isolated from the Middle Ear

2017 ◽  
Vol 5 (21) ◽  
Author(s):  
Aimee Tan ◽  
Luke V. Blakeway ◽  
Lauren O. Bakaletz ◽  
Matthew Boitano ◽  
Tyson A. Clark ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Moraxella Catarrhalis ◽  
Complete Genome ◽  
Bacterial Pathogen ◽  
Chronic Obstructive ◽  
Phase Variable ◽  
Obstructive Pulmonary Disease ◽  
Content Type ◽  
Epigenetic Regulator

ABSTRACT Moraxella catarrhalis is an important bacterial pathogen that causes otitis media and exacerbations of chronic obstructive pulmonary disease. Here, we report the complete genome sequence of M. catarrhalis strain CCRI-195ME, which contains the phase-variable epigenetic regulator ModM3.

scholarly journals Draft Genome Sequence of Enterobacter hormaechei subsp. steigerwaltii Strain BEI01

2021 ◽  
Vol 10 (28) ◽  
Author(s):  
Soon Keong Wee ◽  
Sharon Cui Mun Chan ◽  
Xue Li Guan ◽  
Eric Peng Huat Yap
Keyword(s):  
Antimicrobial Resistance ◽  
Genome Sequence ◽  
Resistance Genes ◽  
Draft Genome ◽  
Gc Content ◽  
Enterobacter Cloacae ◽  
Metal Resistance ◽  
Content Type ◽  
Antimicrobial Resistance Genes ◽  
Enterobacter Hormaechei

Here, we report the genome sequence of Enterobacter hormaechei subsp. steigerwaltii strain BEI01, originally deposited as a member of the Enterobacter cloacae complex. The genome is 4,900,246 bp in size with a GC content of 55.44%; it contains multidrug antimicrobial resistance genes and several metal resistance gene operons.

scholarly journals Complete genome sequence of an extensively drug resistant (XDR) M. morganii SMM01 isolated from a patient with urinary and fecal incontinence

2021 ◽  
Vol 22 (1) ◽  
Author(s):  
Pachi Pulusu Chanakya ◽  
Balaram Khamari ◽  
Manmath Lama ◽  
Arun Sai Kumar Peketi ◽  
Prakash Kumar ◽  
...  
Keyword(s):  
Antimicrobial Resistance ◽  
Fecal Incontinence ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gc Content ◽  
Gene Clusters ◽  
Illumina Hiseq ◽  
Resistance Profile ◽  
Antimicrobial Resistance Profile

Abstract Objective M. morganii is a gram-negative, non-lactose fermenting and an opportunistic pathogen frequently associated with nosocomial infections. Although first isolated in 1906 from a pediatric fecal sample, not many M. morganii isolates have been sequenced. The objective of this work is to determine the complete genome sequence of an XDR M. morganii strain (SMM01) isolated from the urine of a patient with urinary and fecal incontinence and to characterize its antimicrobial resistance profile. Data description Here, we report the complete genome sequence of M. morganii SMM01 generated from the hybrid assembly of Illumina HiSeq X and Nanopore MinION reads. The assembly is 100% complete with genome size of 39,30,130 bp and GC content of 51%. Genomic features include 3617 CDS, 18 rRNAs, 78 tRNAs, 4 ncRNAs and 60 pseudogenes. Antimicrobial resistance profile was characterized by the presence of genes conferring resistance to aminoglycosides, β-lactams, fluoroquinolones, chloramphenicol, and tetracyclines. Secondary metabolite biosynthetic gene clusters like NRPS, T1PKS, thiopeptide, beta-lactone, and bacteriocin were identified. The genome data described here would be the first complete genome of an Indian M. morganii isolate providing crucial information on antimicrobial resistance patterns, paving the way for further comparative genome analyses.

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