scholarly journals Draft Genome Sequence of the Redox-Active Enteric Bacterium Citrobacter portucalensis Strain MBL

2020 ◽  
Vol 9 (32) ◽  
Author(s):  
Lev M. Tsypin ◽  
Scott H. Saunders ◽  
Yinon Bar-On ◽  
Jared R. Leadbetter ◽  
Dianne K. Newman
Keyword(s):  
Carboxylic Acid ◽  
Genome Sequence ◽  
Enrichment Culture ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Enteric Bacterium ◽  
Content Type ◽  
Soil Enrichment ◽  
Redox Active ◽  
A Genome

ABSTRACT We grew a soil enrichment culture to identify organisms that anaerobically oxidize phenazine-1-carboxylic acid. A strain of Citrobacter portucalensis was isolated from this enrichment and sequenced by both Illumina and PacBio technologies. It has a genome with a length of 5.3 Mb, a G+C content of 51.8%, and at least one plasmid.

scholarly journals Genome Sequence of Pseudomonas sp. Strain AN3A02, Isolated from Rhizosphere of Deschampsia antarctica Desv., with Antagonism against Botrytis cinerea

2020 ◽  
Vol 9 (21) ◽  
Author(s):  
Matías Poblete-Morales ◽  
Claudia Rabert ◽  
Andrés F. Olea ◽  
Héctor Carrasco ◽  
Raúl Calderón ◽  
...  
Keyword(s):  
Botrytis Cinerea ◽  
Genome Sequence ◽  
Sequence Data ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Deschampsia Antarctica ◽  
Dual Culture ◽  
Content Type ◽  
A Genome ◽  
Antarctic Continent

ABSTRACT Here, we announce the draft genome sequence of Pseudomonas sp. strain AN3A02, isolated from the rhizosphere of one of the only two species of vascular plants existing in the Antarctic continent, Deschampsia antarctica Desv. This isolate, which inhibited the mycelial growth of Botrytis cinerea in dual culture, has a genome sequence of 6,778,644 bp, with a G+C content of 60.4%. These draft genome sequence data provide insight into the genetics underpinning the antifungal activity of this strain.

scholarly journals Draft Genome Sequence of a Dictyoglomus sp. from an Enrichment Culture of a New Zealand Geothermal Spring

2018 ◽  
Vol 6 (11) ◽  
Author(s):  
Anna-Louise Reysenbach ◽  
John A. Donaho ◽  
John F. Kelley ◽  
Emily St. John ◽  
Christina Turner ◽  
...  
Keyword(s):  
New Zealand ◽  
Carbohydrate Metabolism ◽  
Genome Sequence ◽  
Hot Spring ◽  
Enrichment Culture ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Complex Carbohydrate ◽  
Content Type ◽  
Geothermal Spring

ABSTRACT A draft genome of a novel Dictyoglomus sp., NZ13-RE01, was obtained from a New Zealand hot spring enrichment culture. The 1,927,012-bp genome is similar in both size and G+C content to other Dictyoglomus spp. Like its relatives, Dictyoglomus sp. NZ13-RE01 encodes many genes involved in complex carbohydrate metabolism.

scholarly journals Draft Genome Sequence of Escherichia coli W26, an Enteric Strain Isolated from Cow Feces

2012 ◽  
Vol 194 (18) ◽  
pp. 5149-5150 ◽  
Author(s):  
Mincheol Kim ◽  
Hana Yi ◽  
Yong-Joon Cho ◽  
Jeonghwan Jang ◽  
Hor-Gil Hur ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
South Korea ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Enteric Bacterium ◽  
Content Type ◽  
E Coli

ABSTRACTAn enteric bacterium,Escherichia coliW26 (KACC 16630), was isolated from feces from a healthy cow in South Korea. Here, we report the draft genome sequence of the isolate, which is closely affiliated with commensal strains belonging toE. coliphylogroup B1.

scholarly journals Draft Genome Sequence of “Candidatus Izimaplasma sp.” Strain ZiA1, Obtained from a Toluene-Degrading and Iron-Reducing Enrichment Culture

2018 ◽  
Vol 7 (8) ◽  
Author(s):  
So-Jeong Kim ◽  
Soo-Je Park ◽  
Jong-Geol Kim ◽  
Man-Young Jung ◽  
Joo-Han Gwak ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Enrichment Culture ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type

Here, we report the draft genome sequence of “Candidatus Izimaplasma sp.” strain ZiA1 (1.88 Mb and 29.6% G+C content).

scholarly journals Draft Genome Sequence of Lactobacillus paraplantarum OSY-TC318, a Producer of the Novel Lantibiotic Paraplantaracin TC318

2019 ◽  
Vol 8 (19) ◽  
Author(s):  
Walaa E. Hussein ◽  
En Huang ◽  
Ismet Ozturk ◽  
Ahmed E. Yousef
Keyword(s):  
Genome Size ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Peptide Sequencing ◽  
Draft Genome Sequence ◽  
The Novel ◽  
Content Type ◽  
A Genome ◽  
Lactobacillus Paraplantarum

Lactobacillus paraplantarum OSY-TC318 was isolated from Turkish Tulum cheese and found to produce a potent anti-Gram-positive peptide. Sequencing of the OSY-TC318 genome revealed a genome size of 3,587,488 bp and an average GC content of 43.4%.

scholarly journals Draft Genome Sequence of Xanthobacter tagetidis ATCC 700314T

2019 ◽  
Vol 8 (28) ◽  
Author(s):  
Syeda A. Fatima ◽  
Abigail E. Goen ◽  
Kyle S. MacLea
Keyword(s):  
Genome Sequence ◽  
Genome Assembly ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Gram Negative ◽  
Content Type ◽  
Degrading Bacterium ◽  
A Genome ◽  
Autotrophic Bacterium

Xanthobacter tagetidis is a thiophene-degrading bacterium associated with root balls of the plant genus Tagetes, which includes marigolds. It is a Gram-negative facultatively autotrophic bacterium with pleomorphic morphology exhibiting bent and branching rods. From strain TagT2CT (= ATCC 700314T), we report a genome assembly of 4,945,221 bp and a 69.5% G+C content.

scholarly journals Draft Genome Sequence of Staphylococcus succinus subsp. succinus Type Strain DSM 14617, Isolated from Plant and Soil Inclusions within 25- to 35-Million-Year-Old Dominican Amber

2017 ◽  
Vol 5 (4) ◽  
Author(s):  
Hairui Zhou ◽  
Zhenyu Yao ◽  
Haihong Shi ◽  
Baixin Wang ◽  
Dong Li ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Dominican Amber ◽  
A Genome

ABSTRACT Staphylococcus succinus subsp. succinus type strain DSM 14617 was isolated from plant and soil inclusions within 25- to 35-million-year-old Dominican amber. The complete genome sequence of strain DSM 14617T includes a genome of 2.88 Mb (32.94% G+C content) without any plasmids.

scholarly journals Draft Genome Sequence of Arthrobacter globiformis mrc11, an Antimicrobial Agent Isolated from a Khangkhui Cave Deposit

2019 ◽  
Vol 8 (11) ◽  
Author(s):  
Dinabandhu Sahoo ◽  
N. Jusna Devi ◽  
N. Ngashangva ◽  
P. Momota ◽  
Y. Rojeena ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Open Reading Frames ◽  
Draft Genome Sequence ◽  
Arthrobacter Globiformis ◽  
Content Type ◽  
A Genome ◽  
Reading Frames ◽  
Cave Deposit

Arthrobacter globiformis mrc11 was isolated from a Khangkhui cave deposit. Here, we report the draft genome sequence of this phylogenetically novel organism, which has a genome size of 4.89 Mb, a 65.9% GC content, and 4,657 predicted open reading frames that can be translated.

scholarly journals Draft Genome Sequence of Pectobacterium carotovorum subsp. carotovorum ATCC 39048, a Carbapenem-Producing Phytopathogen

2018 ◽  
Vol 7 (5) ◽  
Author(s):  
Rita E. Monson ◽  
Katherine Jones ◽  
George P. C. Salmond
Keyword(s):  
Carboxylic Acid ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Pectobacterium Carotovorum ◽  
Content Type ◽  
Lactam Antibiotic ◽  
Carotovorum Subsp

Pectobacterium carotovorum subsp. carotovorum ATCC 39048 was originally isolated in the 1980s and studied because it produced the β-lactam antibiotic 1-carbapen-2-em-3-carboxylic acid.

scholarly journals Draft Genome Sequence of Cronobacter sakazakii GP1999, Sequence Type 145, an Epiphytic Isolate Obtained from the Tomato’s Rhizoplane/Rhizosphere Continuum

2017 ◽  
Vol 5 (31) ◽  
Author(s):  
Hannah R. Chase ◽  
Leo Eberl ◽  
Roger Stephan ◽  
HyeJin Jeong ◽  
Chaeyoon Lee ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
Cronobacter Sakazakii ◽  
Tomato Plants ◽  
Coding Sequences ◽  
Content Type ◽  
A Genome

ABSTRACT We present here the draft genome of Cronobacter sakazakii GP1999, a sequence type 145 strain isolated from the rhizosphere of tomato plants. Assembly and annotation of the genome resulted in a genome of 4,504,670 bp in size, with 4,148 coding sequences, and a GC content of 56.8%.

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