scholarly journals Draft Genome Sequence of a Vibrio parahaemolyticus Strain, KS17.S5-1, with Multiple Antibiotic Resistance Genes, Which Causes Acute Hepatopancreatic Necrosis Disease in Penaeus monodon in the West Coast of Peninsular Malaysia

2018 ◽  
Vol 7 (2) ◽  
Author(s):  
Sridevi Devadas ◽  
Subha Bhassu ◽  
Tze Chiew Christie Soo ◽  
Suhaina Nashath Mohamed Iqbal ◽  
Fatimah M. Yusoff ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Vibrio Parahaemolyticus ◽  
Draft Genome ◽  
Penaeus Monodon ◽  
Antibiotic Resistance Genes ◽  
Peninsular Malaysia ◽  
Draft Genome Sequence ◽  
Parahaemolyticus Strain ◽  
Content Type ◽  
Acute Hepatopancreatic Necrosis Disease

We report the first draft genome sequence of a Vibrio parahaemolyticus strain (Vp AHPND), which causes acute hepatopancreatic necrosis disease (AHPND) in Penaeus monodon. The strain has a pVA1-like plasmid carrying pirAvp and pirBvp genes.

scholarly journals Draft Genome Sequence of Vibrio parahaemolyticus Strain PH1339, Which Causes Acute Hepatopancreatic Necrosis Disease in Shrimp in the Philippines

2019 ◽  
Vol 8 (46) ◽  
Author(s):  
Sarah Mae U. Penir ◽  
Leobert D. dela Pena ◽  
Nikko Alvin R. Cabillon ◽  
Angela Denise P. Bilbao ◽  
Edgar C. Amar ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Vibrio Parahaemolyticus ◽  
Draft Genome ◽  
The Philippines ◽  
Draft Genome Sequence ◽  
Penaeus Vannamei ◽  
Parahaemolyticus Strain ◽  
Content Type ◽  
Genes Encoding ◽  
Acute Hepatopancreatic Necrosis Disease

We report the first draft genome sequence of an acute hepatopancreatic necrosis disease (AHPND)-causing Vibrio parahaemolyticus strain isolated from a Penaeus vannamei sample from the Philippines. The strain carries the genes encoding the Pir-like toxin pair PirAvp and PirBvp.

scholarly journals Draft Genome Sequence of the Shrimp Pathogen Vibrio parahaemolyticus ST17.P5-S1, Isolated in Peninsular Malaysia

2018 ◽  
Vol 7 (11) ◽  
Author(s):  
Sridevi Devadas ◽  
Subha Bhassu ◽  
Tze Chiew Christie Soo ◽  
Fatimah M. Yusoff ◽  
Mohamed Shariff
Keyword(s):  
Antibiotic Resistance ◽  
Resistance Genes ◽  
Vibrio Parahaemolyticus ◽  
East Coast ◽  
Draft Genome ◽  
Antibiotic Resistance Genes ◽  
Peninsular Malaysia ◽  
Penaeus Vannamei ◽  
Content Type ◽  
Acute Hepatopancreatic Necrosis Disease

We sequenced the genome of Vibrio parahaemolyticus strain ST17.P5-S1, isolated from Penaeus vannamei cultured in the east coast of Peninsular Malaysia. The strain contains several antibiotic resistance genes and a plasmid encoding the Photorhabdus insect-related (Pir) toxin-like genes, pirAvp and pirBvp, associated with acute hepatopancreatic necrosis disease (AHPND).

scholarly journals Draft Genome Sequence of Vibrio parahaemolyticus Strain VP14, Isolated from a Penaeus vannamei Culture Farm

2018 ◽  
Vol 6 (11) ◽  
Author(s):  
Ashok Kumar Jangam ◽  
T. Bhuvaneswari ◽  
A. Navaneeth Krishnan ◽  
Vinaya Kumar Katneni ◽  
Satheesha Avunje ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Vibrio Parahaemolyticus ◽  
Draft Genome ◽  
Gc Content ◽  
Southern India ◽  
Draft Genome Sequence ◽  
Penaeus Vannamei ◽  
Parahaemolyticus Strain ◽  
Coding Sequences ◽  
Content Type

ABSTRACT Here, we report the draft genome sequence of an isolate of Vibrio parahaemolyticus , VP14, recovered from the gut of Penaeus vannamei shrimp farmed in southern India. The genome of VP14 comprised 5,224,046 bp with a GC content of 45.3% and contained 5,326 genes, including 4,972 coding sequences.

scholarly journals Draft Genome Sequence of Vibrio parahaemolyticus Strain M1-1, Which Causes Acute Hepatopancreatic Necrosis Disease in Shrimp in Vietnam

2018 ◽  
Vol 6 (3) ◽  
Author(s):  
Ramya Kumar ◽  
Che-Chih Chang ◽  
Tze Hann Ng ◽  
Jiun-Yan Ding ◽  
Ta-Chien Tseng ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Vibrio Parahaemolyticus ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Mild Form ◽  
Parahaemolyticus Strain ◽  
Virulent Strains ◽  
Acute Hepatopancreatic Necrosis Disease

ABSTRACT We report here the genome sequence of Vibrio parahaemolyticus strain M1-1, which causes a mild form of shrimp acute hepatopancreatic necrosis disease (AHPND). Compared to other virulent strains, the M1-1 genome appeared to express several additional genes, while some genes were missing. These instabilities may be related to the reduced virulence of M1-1.

scholarly journals Draft Genome Sequence of Bowmanella denitrificans JL63, a Bacterium Isolated from Whiteleg Shrimp ( Litopenaeus vannamei ) That Can Inhibit the Growth of Vibrio parahaemolyticus

2018 ◽  
Vol 6 (14) ◽  
Author(s):  
Jason P. LaPorte ◽  
Edward J. Spinard ◽  
Marta Gomez-Chiarri ◽  
David C. Rowley ◽  
John J. Mekalanos ◽  
...  
Keyword(s):  
Antibacterial Activity ◽  
Genome Sequence ◽  
Litopenaeus Vannamei ◽  
Vibrio Parahaemolyticus ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Whiteleg Shrimp ◽  
Acute Hepatopancreatic Necrosis Disease

ABSTRACT Bowmanella denitrificans strain JL63 was isolated from a whiteleg shrimp ( Litopenaeus vannamei ) and was determined to have antibacterial activity against an acute hepatopancreatic necrosis disease (AHPND) strain of Vibrio parahaemolyticus . Here, we report the draft genome sequence of this strain and identify genes that are potentially involved in its antibacterial activity.

scholarly journals Draft Genome Sequence of Ezakiella peruensis Strain M6.X2, a Human Gut Gram-Positive Anaerobic Coccus

2018 ◽  
Vol 6 (9) ◽  
pp. e01487-17
Author(s):  
Awa Diop ◽  
Khoudia Diop ◽  
Enora Tomei ◽  
Didier Raoult ◽  
Florence Fenollar ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Antibiotic Resistance Genes ◽  
Draft Genome Sequence ◽  
Human Gut ◽  
Gene Encoding ◽  
Content Type ◽  
Protein Encoding ◽  
Short Palindromic Repeat ◽  
Encoding Genes

ABSTRACT We report here the draft genome sequence of Ezakiella peruensis strain M6.X2T. The draft genome is 1,672,788 bp long and harbors 1,589 predicted protein-encoding genes, including 26 antibiotic resistance genes with 1 gene encoding vancomycin resistance. The genome also exhibits 1 clustered regularly interspaced short palindromic repeat region and 333 genes acquired by horizontal gene transfer.

scholarly journals Draft Genome Sequence of Corynebacterium aurimucosum UMB7769, Isolated from the Female Urinary Tract

2020 ◽  
Vol 9 (22) ◽  
Author(s):  
Samantha Eskandar ◽  
Taylor Miller-Ensminger ◽  
Adelina Voukadinova ◽  
Alan J. Wolfe ◽  
Catherine Putonti
Keyword(s):  
Antibiotic Resistance ◽  
Urinary Tract ◽  
Genome Sequence ◽  
Resistance Genes ◽  
Draft Genome ◽  
Gc Content ◽  
Antibiotic Resistance Genes ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Female Urinary Tract

ABSTRACT Here, we present the draft genome sequence of Corynebacterium aurimucosum UMB7769, isolated from the female urinary tract. The size of the genome is 2,731,818 bp, assembled in 50 contigs, with an observed GC content of 60.9% and an N50 score of 129,518 bp. Annotation revealed 31 antibiotic resistance genes.

scholarly journals Draft Genome Sequence of Vibrio owensii Strain SH-14, Which Causes Shrimp Acute Hepatopancreatic Necrosis Disease

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Liyuan Liu ◽  
Jinzhou Xiao ◽  
Xiaoming Xia ◽  
Yingjie Pan ◽  
Shuling Yan ◽  
...  
Keyword(s):  
Sequence Analysis ◽  
Genome Sequence ◽  
Vibrio Parahaemolyticus ◽  
Sequence Similarity ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Toxin Genes ◽  
The One ◽  
Acute Hepatopancreatic Necrosis Disease

We sequenced Vibrio owensii strain SH-14, which causes serious acute hepatopancreatic necrosis disease (AHPND) in shrimp. Sequence analysis showed a large extrachromosomal plasmid, which encoded pir toxin genes and shared highly sequence similarity with the one observed in AHPND-causing Vibrio parahaemolyticus strains. The results suggest that this plasmid appears to play an important role in shrimp AHPND.

scholarly journals Draft Genome Sequence of the Luminescent Strain Vibrio campbellii LB102, Isolated from a Black Tiger Shrimp (Penaeus monodon) Broodstock Rearing System

2017 ◽  
Vol 5 (20) ◽  
Author(s):  
Sujeet Kumar ◽  
Ashok Kumar Jangam ◽  
V. Akhil ◽  
Vidya Rajendran ◽  
Vinaya Kumar Katneni ◽  
...  
Keyword(s):  
Sequence Analysis ◽  
Yersinia Pestis ◽  
Genome Sequence ◽  
Draft Genome ◽  
Penaeus Monodon ◽  
Draft Genome Sequence ◽  
Secretion Systems ◽  
Content Type ◽  
Black Tiger Shrimp ◽  
Vibrio Campbellii

ABSTRACT We report here the genome sequence of Vibrio campbellii LB102, isolated from the broodstock rearing system of a shrimp hatchery in India. Sequence analysis revealed the presence of effector toxins of the type III (YopT, sharing 39% identity with Yersinia pestis) and type VI (VgrG-3 and hemolysin coregulated protein of V. cholerae) secretion systems.

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