scholarly journals Draft Genome Sequences of a Bacillus subtilis Strain, a Bacillus velezensis Strain, a Paenibacillus Strain, and an Acinetobacter baumannii Strain, All Isolated from the Phyllosphere of Lactuca sativa or Solanum lycopersicum

2021 ◽  
Vol 10 (4) ◽  
Author(s):  
Claudia Y. Muñoz ◽  
Anne de Jong ◽  
Oscar P. Kuipers
Keyword(s):  
Bacillus Subtilis ◽  
Acinetobacter Baumannii ◽  
Solanum Lycopersicum ◽  
Lactuca Sativa ◽  
Draft Genome ◽  
Gene Clusters ◽  
Subtilis Strain ◽  
Bacillus Velezensis ◽  
Genome Sequences ◽  
Microbe Interactions

ABSTRACT Four strains isolated from tomato and lettuce phyllosphere were sequenced in order to investigate the presence of novel antimicrobial gene clusters and to get a better understanding of plant microbe interactions. These strains comprise two Bacillus strains, one Paenibacillus strain, and one Acinetobacter strain.

scholarly journals Draft Genome Sequences of Bacillus subtilis Strains TNC1(2019), TNC3(2019), and TNW1(2019), as Well as Bacillus velezensis Strains TNC2(2019) and TNW2(2019), Isolated from Cabbage Kimchee

2020 ◽  
Vol 9 (23) ◽  
Author(s):  
Gabriel G. Perron ◽  
Tejaswee Neupane ◽  
Rachael A. Mendoza
Keyword(s):  
Bacillus Subtilis ◽  
Draft Genome ◽  
Bacillus Velezensis ◽  
Genome Sequences ◽  
Content Type

ABSTRACT We report the draft genome sequences of five novel Bacillus strains isolated from five different batches of fermented Napa cabbage kimchee. Strains TNC1(2019), TNC3(2019), and TNW1(2019) were identified as Bacillus subtilis, while TNC2(2019) and TNW2(2019) were identified as Bacillus velezensis.

scholarly journals Draft Genome Sequences of Three Rhizospheric Plant Growth-Promoting Bacteria

2019 ◽  
Vol 8 (26) ◽  
Author(s):  
Olubukola Oluranti Babalola ◽  
Ayansina Segun Ayangbenro ◽  
Oluwaseyi Samuel Olanrewaju
Keyword(s):  
Bacillus Subtilis ◽  
Draft Genome ◽  
Plant Growth Promoting Bacteria ◽  
Whole Genome ◽  
Bacillus Velezensis ◽  
Genome Sequences ◽  
Content Type ◽  
Plant Growth Promoting ◽  
Growth Promoting ◽  
Quality Control Check

Here, we report the draft genome sequences of Bacillus subtilis A1, Sphingobacterium sp. strain A3, and Pseudomonas sp. strain A29; Sphingobacterium sp. A3 and Pseudomonas sp. A29 were identified as Bacillus velezensis strain A3 and Bacillus subtilis strain A29, respectively, after a quality control check of the whole-genome sequences deposited in the NCBI database. These bacteria exhibit tremendous production of siderophores and significant antimicrobial potential. When inoculated on maize, these isolates increase its yield.

scholarly journals Draft Genome Sequences of Bacillus subtilis Strain DKU_NT_01 Isolated from Traditional Korean Food Containing Soybean (Chung-gook-jang)

2017 ◽  
Vol 5 (31) ◽  
Author(s):  
Man-Seok Bang ◽  
Hee-Won Jeong ◽  
Yea-Jin Lee ◽  
Ha-Yeong Oh ◽  
Su Ji Lee ◽  
...  
Keyword(s):  
Bacillus Subtilis ◽  
De Novo ◽  
Draft Genome ◽  
Whole Genome Sequence ◽  
Subtilis Strain ◽  
Whole Genome ◽  
Genome Sequences ◽  
Coding Sequences ◽  
Content Type ◽  
Korean Food

ABSTRACT Here, we report the whole-genome sequence of Bacillus subtilis strain DKU_NT_01 isolated from traditional Korean food containing soybean (chung-gook-jang). The de novo genome of Bacillus subtilis strain DKU_NT_01 has one contig and G+C content of 55.4%, is 4,954,264 bp in length, and contains 5,011 coding sequences (CDSs).

scholarly journals Draft Genome Sequences of Fungus Aspergillus calidoustus

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Fabian Horn ◽  
Jörg Linde ◽  
Derek J. Mattern ◽  
Grit Walther ◽  
Reinhard Guthke ◽  
...  
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Functional Annotation ◽  
Draft Genome ◽  
Genome Mining ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Genome Sequences

Here, we report the draft genome sequence of Aspergillus calidoustus (strain SF006504) . The functional annotation of A. calidoustus predicts a relatively large number of secondary metabolite gene clusters. The presented genome sequence builds the basis for further genome mining.

scholarly journals Draft Genome Sequences of Two Acinetobacter baumannii Isolates from a Fatal Case of Necrotizing Fasciitis

2020 ◽  
Vol 9 (13) ◽  
Author(s):  
Brock A. Arivett ◽  
Angella Charnot-Katsikas ◽  
Cindy Bethel ◽  
Steven E. Fiester ◽  
Luis A. Actis
Keyword(s):  
Necrotizing Fasciitis ◽  
Acinetobacter Baumannii ◽  
Fatal Case ◽  
Draft Genome ◽  
Bacterial Pathogen ◽  
Genome Sequences ◽  
Content Type ◽  
Carbapenem Resistant ◽  
Control And Prevention ◽  
Total Dna

Carbapenem-resistant Acinetobacter baumannii is a bacterial pathogen with serious implications for human health and is recognized as an urgent threat by the Centers for Disease Control and Prevention (CDC). Total DNA from two A. baumannii clinical isolates collected over 3 days from a fatal case of necrotizing fasciitis has been sequenced to >30× coverage.

Characterization and sequence analysis of potential biofertilizer and biocontrol agent Bacillus subtilis strain SEM-9 from silkworm excrement

2019 ◽  
Vol 65 (1) ◽  
pp. 45-58 ◽  
Author(s):  
Qingrong Li ◽  
Sentai Liao ◽  
Huyu Zhi ◽  
Dongxu Xing ◽  
Yang Xiao ◽  
...  
Keyword(s):  
Bacillus Subtilis ◽  
Fusarium Wilt ◽  
Biocontrol Agent ◽  
Gene Clusters ◽  
Antagonistic Effect ◽  
Subtilis Strain ◽  
Fusarium Spp ◽  
Antagonistic Microorganisms ◽  
Biochemical Analyses ◽  
Physiological And Biochemical

Fusarium wilt is a devastating soil-borne disease caused mainly by highly host-specific formae speciales of Fusarium oxysporum. Antagonistic microorganisms play a very important role in Fusarium wilt control, and the isolation of potential biocontrol strains is becoming more and more important. We isolated a bacterial strain (SEM-9) from the high-temperature stage of silkworm excrement composting, which had a marked ability to solubilize phosphorus, promote the growth and increase the yield of the small Chinese cabbage, and which also exhibited considerable antagonistic effect towards Fusarium sambucinum and other fungi. The result of physiological and biochemical analyses, as well as genome sequencing, showed that SEM-9 was a strain of Bacillus subtilis. Through genome annotation and analysis, it was found that SEM-9 contained genes related to the regulation of biofilm formation, which may play an important role in colonization, and gene clusters encoding the biosynthesis of antimicrobials, such as surfactin, bacilysin, fengycin, and subtilosin-A. The production of such antifungal compounds may constitute the basis of the mode-of-action of SEM-9 against Fusarium spp. These data suggested that the SEM-9 strain has potential as both a biofertilizer and a biocontrol agent, with the potential to manage Fusarium wilt disease in crops.

scholarly journals Draft Genome Sequences of 11 Clinical Isolates of Acinetobacter baumannii

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
P. G. Higgins ◽  
J. Z.-M. Chan ◽  
H. Seifert ◽  
M. J. Pallen ◽  
A. D. Millard
Keyword(s):  
Antimicrobial Resistance ◽  
Acinetobacter Baumannii ◽  
Draft Genome ◽  
Hospital Setting ◽  
Multidrug Resistant ◽  
Clinical Isolates ◽  
Single Patient ◽  
Genome Sequences

The development of multidrug-resistant Acinetobacter baumannii is of serious concern in the hospital setting. Here, we report draft genome sequences of 11 A. baumannii isolates that were isolated from a single patient over a 65-day period, during which time the isolates exhibited increased antimicrobial resistance.

scholarly journals Draft Genome Sequences of Acinetobacter baumannii Strains Harboring the bla NDM-1 Gene Isolated in Lebanon from Civilians Wounded during the Syrian Civil War

2016 ◽  
Vol 4 (1) ◽  
Author(s):  
Sima Tokajian ◽  
Jonathan A. Eisen ◽  
Guillaume Jospin ◽  
Monzer Hamze ◽  
Rayane Rafei ◽  
...  
Keyword(s):  
Civil War ◽  
Acinetobacter Baumannii ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Genome Sequences ◽  
Syrian Civil War

We present here the draft genome sequences of multidrug-resistant bla NDM-1 -positive Acinetobacter baumannii strains ACMH-6200 and ACMH-6201, isolated in north Lebanon from civilians wounded during the Syrian civil war. The draft genomes were contained in 217 contigs for ACMH-6200 and 83 contigs for ACMH-6201, including a combined 3,997,237 bases for ACMH-6200 and 3,983,110 bases for ACMH-6201, with 39% and 38.9% G+C content, respectively.

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